Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_D12
(283 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 28 1.2
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 28 1.2
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 28 1.2
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 28 1.2
U50300-2|AAC48102.1| 335|Caenorhabditis elegans Serpentine rece... 27 1.6
Z92796-6|CAB63232.1| 405|Caenorhabditis elegans Hypothetical pr... 25 6.3
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 25 6.3
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 25 6.3
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 25 6.3
Z75554-11|CAA99961.1| 301|Caenorhabditis elegans Hypothetical p... 25 6.3
U55857-3|AAA98028.1| 303|Caenorhabditis elegans Hypothetical pr... 25 6.3
Z77670-4|CAB01249.2| 439|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical pr... 25 8.4
AF325178-1|AAG49583.1| 439|Caenorhabditis elegans CEH-32 protein. 25 8.4
AF078789-1|AAK21515.1| 392|Caenorhabditis elegans Hypothetical ... 25 8.4
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 238 DVSSARSERYALNAFKHFPGPRVCVQVKMRRIARLLPSNVFSTRGN 101
D+S ARS+R +L HF + + +RRI ++LP + G+
Sbjct: 2469 DLSKARSQRVSLLDAMHFLNSHFQLNI-VRRIVQVLPFRIHRMEGS 2513
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 238 DVSSARSERYALNAFKHFPGPRVCVQVKMRRIARLLPSNVFSTRGN 101
D+S ARS+R +L HF + + +RRI ++LP + G+
Sbjct: 2466 DLSKARSQRVSLLDAMHFLNSHFQLNI-VRRIVQVLPFRIHRMEGS 2510
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 238 DVSSARSERYALNAFKHFPGPRVCVQVKMRRIARLLPSNVFSTRGN 101
D+S ARS+R +L HF + + +RRI ++LP + G+
Sbjct: 2469 DLSKARSQRVSLLDAMHFLNSHFQLNI-VRRIVQVLPFRIHRMEGS 2513
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 238 DVSSARSERYALNAFKHFPGPRVCVQVKMRRIARLLPSNVFSTRGN 101
D+S ARS+R +L HF + + +RRI ++LP + G+
Sbjct: 2466 DLSKARSQRVSLLDAMHFLNSHFQLNI-VRRIVQVLPFRIHRMEGS 2510
>U50300-2|AAC48102.1| 335|Caenorhabditis elegans Serpentine
receptor, class x protein2 protein.
Length = 335
Score = 27.5 bits (58), Expect = 1.6
Identities = 9/27 (33%), Positives = 20/27 (74%)
Frame = -2
Query: 195 SNIFPGRESVCRLRCVVLQGCYRVMYL 115
S++F R ++C+L C+++ C+ +MY+
Sbjct: 120 SDLFT-RTNICKLFCIIIPFCFFLMYM 145
>Z92796-6|CAB63232.1| 405|Caenorhabditis elegans Hypothetical
protein H25K10.7 protein.
Length = 405
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -3
Query: 251 LFSC-RCFERSVRTVRAQRLQ 192
LF C RCF + VRTV ++ LQ
Sbjct: 383 LFGCKRCFRKIVRTVLSKLLQ 403
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 135 NLAIRRILTCTQTLGPGKCL 194
N IRR+L T+ +GPGK L
Sbjct: 1776 NEPIRRVLVETKIMGPGKSL 1795
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 135 NLAIRRILTCTQTLGPGKCL 194
N IRR+L T+ +GPGK L
Sbjct: 1776 NEPIRRVLVETKIMGPGKSL 1795
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 135 NLAIRRILTCTQTLGPGKCL 194
N IRR+L T+ +GPGK L
Sbjct: 1776 NEPIRRVLVETKIMGPGKSL 1795
>Z75554-11|CAA99961.1| 301|Caenorhabditis elegans Hypothetical
protein ZC455.8a protein.
Length = 301
Score = 25.4 bits (53), Expect = 6.3
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 247 FLADVS-SARSERYALNAFKHFPGPRVCVQVKMRRIARLLPSNVFSTR 107
F+ D+ S Y + + P + Q K IA LL SNV STR
Sbjct: 52 FIVDICYSLTVSIYYFSLIVSYISPFILFQYKSLFIATLLSSNVVSTR 99
>U55857-3|AAA98028.1| 303|Caenorhabditis elegans Hypothetical
protein K08D10.8 protein.
Length = 303
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/55 (21%), Positives = 25/55 (45%)
Frame = +2
Query: 44 HSNNRVLVRLARALSIFKNITTCTKYITR*QPCNTTHLNLHTDSRPGKMFEGVER 208
H+N+ ++V+ + L IF T +Y+ C + + + +EG +R
Sbjct: 91 HTNSVMVVQCIKPLEIFTGFETPNRYVVHDMYCRPLLYCMERSNIFARQYEGNDR 145
>Z77670-4|CAB01249.2| 439|Caenorhabditis elegans Hypothetical
protein W05E10.3 protein.
Length = 439
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 237 MFRALGPNGTRSTPSNIFPGRESV 166
M +AL NG STPS +FP SV
Sbjct: 31 MLQALQANGASSTPS-LFPAMPSV 53
>Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical
protein C44C10.3 protein.
Length = 474
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 63 LCASHAHYQSSKILPRVLNTLLGNNL 140
+C S AHYQS L + L L+G L
Sbjct: 77 VCGSSAHYQSFFSLVQYLGVLVGTVL 102
>AF325178-1|AAG49583.1| 439|Caenorhabditis elegans CEH-32 protein.
Length = 439
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 237 MFRALGPNGTRSTPSNIFPGRESV 166
M +AL NG STPS +FP SV
Sbjct: 31 MLQALQANGASSTPS-LFPAMPSV 53
>AF078789-1|AAK21515.1| 392|Caenorhabditis elegans Hypothetical
protein Y44E3B.2 protein.
Length = 392
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 152 HLNLHTDSRPGKMFEGVERVPFGPSARNICKKTKRTVQPD*R 277
H+ LHT G + G +P G + ++ R+++PD R
Sbjct: 7 HVFLHTTFNSGSVKNGECYLPSGKLLKRAVRRELRSLRPDDR 48
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,448,035
Number of Sequences: 27780
Number of extensions: 116962
Number of successful extensions: 378
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 378
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 259761072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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