Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_D10
(285 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 3.0
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 21 3.0
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 20 6.8
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 20 6.8
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 20 6.8
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 20 6.8
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 20 6.8
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 20 6.8
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 20 6.8
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 20 6.8
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 20 6.8
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.0 bits (42), Expect = 3.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 224 RGKKYDPCC 250
R KKY PCC
Sbjct: 210 RHKKYYPCC 218
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 21.0 bits (42), Expect = 3.0
Identities = 7/18 (38%), Positives = 9/18 (50%)
Frame = +2
Query: 164 QNQTRYCYQSYLDCHRCQ 217
Q T YC CH+C+
Sbjct: 30 QGTTSYCLGCGDSCHKCK 47
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 6.8
Identities = 11/39 (28%), Positives = 15/39 (38%)
Frame = +1
Query: 127 YQNCPFRPKVP*PKPDEVLLSELFRLPSMPEGPRQEVRP 243
Y N + ++P P P + P P P QE P
Sbjct: 110 YYNINYIEQIPVPVPVPIYCGNFPSRPMGPWVPMQEQIP 148
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 6.8
Identities = 11/39 (28%), Positives = 15/39 (38%)
Frame = +1
Query: 127 YQNCPFRPKVP*PKPDEVLLSELFRLPSMPEGPRQEVRP 243
Y N + ++P P P + P P P QE P
Sbjct: 110 YYNINYIEQIPVPVPVPIYCGNFPSRPMGPWVPMQEQIP 148
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 6.8
Identities = 11/39 (28%), Positives = 15/39 (38%)
Frame = +1
Query: 127 YQNCPFRPKVP*PKPDEVLLSELFRLPSMPEGPRQEVRP 243
Y N + ++P P P + P P P QE P
Sbjct: 110 YYNINYIEQIPVPVPVPIYCGNFPSRPMGPWVPMQEQIP 148
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 6.8
Identities = 11/39 (28%), Positives = 15/39 (38%)
Frame = +1
Query: 127 YQNCPFRPKVP*PKPDEVLLSELFRLPSMPEGPRQEVRP 243
Y N + ++P P P + P P P QE P
Sbjct: 110 YYNINYIEQIPVPVPVPIYCGNFPSRPMGPWVPMQEQIP 148
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 6.8
Identities = 11/39 (28%), Positives = 15/39 (38%)
Frame = +1
Query: 127 YQNCPFRPKVP*PKPDEVLLSELFRLPSMPEGPRQEVRP 243
Y N + ++P P P + P P P QE P
Sbjct: 110 YYNINYIEQIPVPVPVPIYCGNFPSRPMGPWVPMQEQIP 148
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 6.8
Identities = 11/39 (28%), Positives = 15/39 (38%)
Frame = +1
Query: 127 YQNCPFRPKVP*PKPDEVLLSELFRLPSMPEGPRQEVRP 243
Y N + ++P P P + P P P QE P
Sbjct: 110 YYNINYIEQIPVPVPVPIYCGNFPSRPMGPWVPMQEQIP 148
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 6.8
Identities = 11/39 (28%), Positives = 15/39 (38%)
Frame = +1
Query: 127 YQNCPFRPKVP*PKPDEVLLSELFRLPSMPEGPRQEVRP 243
Y N + ++P P P + P P P QE P
Sbjct: 110 YYNINYIEQIPVPVPVPIYCGNFPSRPMGPWVPMQEQIP 148
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 19.8 bits (39), Expect = 6.8
Identities = 11/39 (28%), Positives = 15/39 (38%)
Frame = +1
Query: 127 YQNCPFRPKVP*PKPDEVLLSELFRLPSMPEGPRQEVRP 243
Y N + ++P P P + P P P QE P
Sbjct: 113 YYNINYIEQIPVPVPVPIYCGNFPSRPMGPWVPMQEQIP 151
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 19.8 bits (39), Expect = 6.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 161 NQNQTRYCYQSYLD 202
N NQ +Y Q++LD
Sbjct: 424 NNNQNKYKNQAHLD 437
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,987
Number of Sequences: 438
Number of extensions: 1519
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 5619645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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