Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_D08
(250 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC14C8.03 |fma2||methionine aminopeptidase Fma2 |Schizosacchar... 27 0.27
SPCC13B11.03c |||hydroxyacylglutathione hydrolase |Schizosacchar... 27 0.48
SPAC1399.03 |fur4||uracil permease|Schizosaccharomyces pombe|chr... 26 0.84
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 25 1.5
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 25 1.9
SPAC19A8.10 |rfp1|mug140|ubiquitin-protein ligase E3 Rfp1|Schizo... 25 1.9
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||... 25 1.9
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 25 1.9
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 24 3.4
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 24 3.4
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 23 4.5
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 23 4.5
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 23 4.5
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 23 5.9
SPCC18.07 |rpc53||DNA-directed RNA polymerase III complex subuni... 23 5.9
SPCC594.02c |||conserved fungal protein|Schizosaccharomyces pomb... 23 5.9
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 23 5.9
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 23 5.9
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 23 7.8
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce... 23 7.8
SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|c... 23 7.8
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 23 7.8
>SPBC14C8.03 |fma2||methionine aminopeptidase Fma2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 27.5 bits (58), Expect = 0.27
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 110 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKK 202
D VE+ DAA E ++ E K+ KKS KK
Sbjct: 29 DGKVEENDAAEEGASNGEKKKKKKKKSSKKK 59
>SPCC13B11.03c |||hydroxyacylglutathione hydrolase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 256
Score = 26.6 bits (56), Expect = 0.48
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 86 KKKIRNKELKLQHVLRTTQNNVH 18
KKK++NKE+ LQ +L T + H
Sbjct: 46 KKKLKNKEIDLQAILTTHHHADH 68
>SPAC1399.03 |fur4||uracil permease|Schizosaccharomyces pombe|chr
1|||Manual
Length = 581
Score = 25.8 bits (54), Expect = 0.84
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -1
Query: 250 YFFSAVLFTIARRYFSFFGGRFLNWRFLDFRGSHLFGCGVLL 125
YF L +A Y S + W+ ++FR + CG+L+
Sbjct: 430 YFVRKGLIRVAPLYSSSSSSPYYFWKGINFRAFASYICGMLI 471
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 25.0 bits (52), Expect = 1.5
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -1
Query: 250 YFFSA--VLFTIARRYFSFFGGRFLNWRFLDFRGSH 149
+FF + VLFT+ S F G FL W F F G++
Sbjct: 315 HFFHSLKVLFTVPSNRRSLFIGCFLQW-FQQFSGTN 349
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 24.6 bits (51), Expect = 1.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 142 GCGVLLFNCCVCHYYY*VSKRKLEIKN*NYST 47
G VL N +C YY V + E+ N +Y T
Sbjct: 82 GIDVLWLNSGICQSYYTVMEAPEEVWNAHYQT 113
>SPAC19A8.10 |rfp1|mug140|ubiquitin-protein ligase E3
Rfp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 254
Score = 24.6 bits (51), Expect = 1.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 141 PKR*LPRKSRNLQLRNLPPKKLKYLRAMV 227
P+R + RN + RN P L YL M+
Sbjct: 53 PRRRRMNRRRNERSRNFPSNHLSYLEDMI 81
>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 992
Score = 24.6 bits (51), Expect = 1.9
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +2
Query: 122 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPASNGKE 232
EK E V S + K+SP E+P ++G +
Sbjct: 582 EKPSKLKETVESKRLSTGVQKQSPAASKEIPVTSGSQ 618
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 24.6 bits (51), Expect = 1.9
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 161 EVKESPIKKSPTKK 202
E +ESP+K PTKK
Sbjct: 892 ETRESPMKNKPTKK 905
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 23.8 bits (49), Expect = 3.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 131 DAAPEEVTSTEVKESPIKKSPTKKTEVPASNGKENGREE 247
D PE+ + + P+KK P+KK++ +N E +E
Sbjct: 58 DLKPED-DEVDEEVVPVKKKPSKKSKKAKANAFEAFADE 95
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 23.8 bits (49), Expect = 3.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 143 EEVTSTEVKESPIKKSPTKKTEVPASN 223
E + K+SP KSPTK +SN
Sbjct: 88 ENMFEESSKQSPPSKSPTKNPSKKSSN 114
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 23.4 bits (48), Expect = 4.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 246 SSLPFSLPLLAGTSVFLVGDFLIGDSLTSVEVTS 145
S P+S P+LA T+ L G +L S ++ V S
Sbjct: 273 SPQPYSGPILASTAPTLDGSYLSNPSNSNPAVMS 306
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 23.4 bits (48), Expect = 4.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 155 STEVKESPIKKSPTKKTEVPASNGKE 232
S+E E P K+ T P+SN +E
Sbjct: 238 SSEAAEQPSSKNNTSGANPPSSNNQE 263
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 23.4 bits (48), Expect = 4.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 182 KKSPTKKTEVPASNGK 229
KK+ K+ EVP SNGK
Sbjct: 73 KKTEFKQDEVPNSNGK 88
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 23.0 bits (47), Expect = 5.9
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -2
Query: 249 TSSLPFSLPLLAGTSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAAS 109
+SSL S L + ++ SLTS TSS AS +T++S
Sbjct: 82 SSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSS 128
>SPCC18.07 |rpc53||DNA-directed RNA polymerase III complex subunit
Rpc53|Schizosaccharomyces pombe|chr 3|||Manual
Length = 330
Score = 23.0 bits (47), Expect = 5.9
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 155 STEVKESPI-KKSPTKKTEVPASNGKENG 238
S+EVKE +K+ ++ + P +G+ENG
Sbjct: 222 SSEVKEEEAGEKTDVEEKKDPDKHGRENG 250
>SPCC594.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 489
Score = 23.0 bits (47), Expect = 5.9
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 113 AAVEKQ-DAAPEEVTSTEVKESPIKKSPTKKTEVPAS 220
A +EK + APE V T SP++ + K T+V S
Sbjct: 309 APLEKPVNLAPEVVEPTNAAASPLQLNAPKLTDVDDS 345
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 23.0 bits (47), Expect = 5.9
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = +2
Query: 134 AAPEEVTSTEVKESPIKKSPTKKTEVPA-----SNGKENG 238
A+P V + S + + P K E+P+ SN K+ G
Sbjct: 512 ASPPPVPRLSITRSQVSREPEKPEEIPSVPPLPSNFKDKG 551
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 23.0 bits (47), Expect = 5.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 122 EKQDAAPEEVTSTEVKESPIKKSPTKKTE 208
EK DA+ T+T + +S K+PTKK++
Sbjct: 1104 EKADAS----TTTVLSDSRFMKAPTKKSQ 1128
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 22.6 bits (46), Expect = 7.8
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 113 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPASNGKENG 238
A + QD+ + + ESP K+PT T+ P S G
Sbjct: 348 ALLMNQDSNSVQPQALAAAESPTTKAPT--TKAPTSEAPPKG 387
>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2310
Score = 22.6 bits (46), Expect = 7.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 139 CGVLLFNCCVCHYYY 95
CG +LFN +YYY
Sbjct: 965 CGFVLFNFSQPYYYY 979
>SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 683
Score = 22.6 bits (46), Expect = 7.8
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = -3
Query: 86 KKKIRNKELKLQHVLRTTQNNV 21
KK++ +++LKL +++ NNV
Sbjct: 156 KKRVIHRDLKLGNIMLDESNNV 177
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 22.6 bits (46), Expect = 7.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 110 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPASNGKEN 235
D E Q ++ + +V E P P KK VPAS +E+
Sbjct: 69 DLTEEHQSSSLNNLKWKDV-EGPNILKPIKKIAVPASESEED 109
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 932,741
Number of Sequences: 5004
Number of extensions: 14193
Number of successful extensions: 68
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 2,362,478
effective HSP length: 60
effective length of database: 2,062,238
effective search space used: 45369236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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