Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_D08
         (250 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    25   0.14 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   1.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   3.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   4.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   4.0  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    20   5.3  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    19   7.1  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    19   9.3  
AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    19   9.3  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 25.0 bits (52), Expect = 0.14
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = -1

Query: 223 IARRYFSFFGGRFLNWR---FLDFRGSHLFGCGV 131
           I+ +Y   F G FLN     F+DF   +L  CGV
Sbjct: 115 ISEKYQEIFNGYFLNSESKDFIDFIQKNLQCCGV 148


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 1.3
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 14  YGEHCFALC 40
           Y  HCFALC
Sbjct: 739 YEAHCFALC 747


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 3.1
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 177 GDSLTSVEVTSSGAASCFSTAASAIIIIE 91
           G S  + E TS+  A  F+TAAS+  ++E
Sbjct: 894 GCSSKNGEPTSAAFAQGFATAASSPGLLE 922


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -2

Query: 243 SLPFSLPLLAGTSVFLVGDFLIGDSLTSVEVTSSGAASCFS 121
           +LP +   + G  V + GD +   +++ V V   G  SC +
Sbjct: 461 ALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSCMA 501


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -2

Query: 243 SLPFSLPLLAGTSVFLVGDFLIGDSLTSVEVTSSGAASCFS 121
           +LP +   + G  V + GD +   +++ V V   G  SC +
Sbjct: 461 ALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSCMA 501


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 19.8 bits (39), Expect = 5.3
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = -2

Query: 207 SVFLVGDFLIGDSLTSVEVTSSGAASCFSTAASAII 100
           +  L  DF+    LT +        SC  +A S II
Sbjct: 95  AAILANDFMKNLELTQIRRDRGLHVSCSFSAGSTII 130


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 19.4 bits (38), Expect = 7.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 250 YFFSAVLFTIA 218
           ++FSA+LF +A
Sbjct: 4   FYFSAILFLLA 14


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -3

Query: 80  KIRNKELKLQHVLRTT 33
           K++NK+   +H+L+ T
Sbjct: 328 KVKNKKAGSKHLLQNT 343


>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 122 EKQDAAPEEVTSTEVK 169
           EKQ     E +STE+K
Sbjct: 99  EKQTTIEREFSSTEMK 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,322
Number of Sequences: 438
Number of extensions: 976
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4401495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)