Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_D07
         (231 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54FZ9 Cluster: Putative uncharacterized protein; n=1; ...    35   0.41 
UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma j...    33   0.94 
UniRef50_A3Y1S5 Cluster: Putative uncharacterized protein; n=2; ...    33   1.2  
UniRef50_UPI00006CD5B6 Cluster: Glutathione S-transferase, N-ter...    32   2.9  
UniRef50_Q76IM7 Cluster: Pol-like protein; n=1; Takifugu rubripe...    31   6.6  

>UniRef50_Q54FZ9 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 744

 Score = 34.7 bits (76), Expect = 0.41
 Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = +1

Query: 19  PGWNNSA-RGEREN*SRVLF-FFFNKEQTFNEIHYI 120
           P WN  A RG+ E   R++  FF+N++Q+ NE HY+
Sbjct: 493 PVWNQIALRGDTETLGRIMSTFFYNEQQSVNEKHYL 528


>UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma
          japonicum|Rep: SJCHGC09205 protein - Schistosoma
          japonicum (Blood fluke)
          Length = 215

 Score = 33.5 bits (73), Expect = 0.94
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = +1

Query: 7  LVDPPGWNNSARGEREN*SRVL 72
          LVDPPG  NSARG +E+ S+VL
Sbjct: 13 LVDPPGCRNSARGSQEHQSQVL 34


>UniRef50_A3Y1S5 Cluster: Putative uncharacterized protein; n=2;
           Vibrionales|Rep: Putative uncharacterized protein -
           Vibrio sp. MED222
          Length = 193

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 15/51 (29%), Positives = 30/51 (58%)
 Frame = +1

Query: 67  VLFFFFNKEQTFNEIHYIT*QKLSSQFASGTRCDGLNELDFIFQKILQFAE 219
           +L++F NKEQ F+++      +   QF+   R DG+ +L  +  ++++F E
Sbjct: 41  ILYYFNNKEQLFDQLIEEHTSRFQEQFSKYQRVDGI-QLQHLLSELIEFWE 90


>UniRef50_UPI00006CD5B6 Cluster: Glutathione S-transferase,
           N-terminal domain containing protein; n=3; Tetrahymena
           thermophila SB210|Rep: Glutathione S-transferase,
           N-terminal domain containing protein - Tetrahymena
           thermophila SB210
          Length = 389

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +1

Query: 55  N*SRVLFFFFNKEQTFNEIHYIT*QKLSSQFASGTRCDG-LNELDFIFQKILQFAE*F 225
           N ++V  F   K+Q FNE   IT +K+  Q        G L+ +DF F ++L+F + F
Sbjct: 289 NSAKVPSFKEEKDQIFNEKFNITFEKIKKQLGENKYLLGNLSFIDFYFYEVLKFFQFF 346


>UniRef50_Q76IM7 Cluster: Pol-like protein; n=1; Takifugu
           rubripes|Rep: Pol-like protein - Fugu rubripes (Japanese
           pufferfish) (Takifugu rubripes)
          Length = 1234

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 150 FWNALRWTE*ARLYLPKDSSIR*VIHP 230
           FWN + W     LYLP++   + +IHP
Sbjct: 774 FWNGIYWVHQGVLYLPREEGGQDLIHP 800


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,176,619
Number of Sequences: 1657284
Number of extensions: 2557927
Number of successful extensions: 4437
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4437
length of database: 575,637,011
effective HSP length: 55
effective length of database: 484,486,391
effective search space used: 10174214211
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)