Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_D07
         (231 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    23   1.8  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    21   7.4  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    21   7.4  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    21   7.4  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    21   7.4  

>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 44  ERERTSLEFCFFFLIKNRHLMK 109
           E   T + FC + L KN H+ +
Sbjct: 317 ETSSTVMNFCLYELAKNPHIQE 338


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 53  SLSPRAELFQPGGSTS 6
           ++SP+   F PG STS
Sbjct: 574 AISPKQHGFMPGRSTS 589


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 38  HEERERTSLEFCFFFLIKNRHLMKYTI*H 124
           HE  +    E+C +  I  RHL  + + H
Sbjct: 349 HEGEKCYRCEYCPYASISMRHLESHLLLH 377


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 179 SSTLSSKRFFNSLSNS 226
           SS +S +RFFN+ ++S
Sbjct: 536 SSIVSRRRFFNTSASS 551


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 179 SSTLSSKRFFNSLSNS 226
           SS +S +RFFN+ ++S
Sbjct: 537 SSIVSRRRFFNTSASS 552


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,452
Number of Sequences: 2352
Number of extensions: 2241
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 52
effective length of database: 441,675
effective search space used: 10600200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)