Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_D06
         (316 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.0  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   2.3  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   2.3  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   5.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    20   5.4  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    20   7.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      19   9.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      19   9.4  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         19   9.4  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 66  TVKLNNGMEIPAIGY 110
           TVK+N  + +P IGY
Sbjct: 638 TVKINENISMPYIGY 652


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -3

Query: 113 SVADCWDFHPIVELDCWYFNLCHYYF 36
           S+ D  +F     L CW  + C Y F
Sbjct: 209 SIVDMGEFLLYRLLRCWLISKCIYVF 234


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -3

Query: 113 SVADCWDFHPIVELDCWYFNLCHYYF 36
           S+ D  +F     L CW  + C Y F
Sbjct: 209 SIVDMGEFLLYRLLRCWLISKCIYVF 234


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +3

Query: 81  NGMEIPAIGYGTWLGISEQAQKDSDPDKPFSFEFDGT 191
           +G   P + +    G+S    KD  P+ P     DGT
Sbjct: 723 DGFPRPVVTWKRATGVSPGDYKDFKPNNPDIKVEDGT 759


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +3

Query: 81  NGMEIPAIGYG 113
           +GM +PA+G+G
Sbjct: 92  SGMPMPALGFG 102


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 144 KDSDPDKPFSFEFDGTDF 197
           KDS  D+PF+ E     F
Sbjct: 127 KDSSRDRPFTCEVCNRSF 144


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +1

Query: 202 RWLRPCRTR 228
           +W +PCR R
Sbjct: 585 QWCKPCRPR 593


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +1

Query: 202 RWLRPCRTR 228
           +W +PCR R
Sbjct: 477 QWCKPCRPR 485


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 51  QIKIPTVKLNNG 86
           ++KIP  K+N G
Sbjct: 177 ELKIPKAKINTG 188


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,142
Number of Sequences: 336
Number of extensions: 1494
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5836655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)