Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_D06
(316 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 23 0.87
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 2.7
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 3.5
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 4.7
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 4.7
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 21 4.7
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 20 6.2
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 20 8.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 20 8.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 20 8.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 20 8.1
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 20 8.1
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 23.0 bits (47), Expect = 0.87
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 209 NHLREISSIEFERKWFVRITIFL 141
N L ++S I+ WF+ TIFL
Sbjct: 283 NSLPKVSYIKASEIWFLGCTIFL 305
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 2.7
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 85 PLLSLTVGILICAIITF 35
PL+SL G+ IC ++TF
Sbjct: 273 PLISLYYGVSIC-LVTF 288
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.0 bits (42), Expect = 3.5
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +3
Query: 159 DKPFSFEFDGTDFPKMVEAMSYAIDVGYRHID 254
DK + FDG D+P + +A+ Y I+
Sbjct: 1447 DKTRAQTFDGKDYPLRLGPCWHAVMTTYPRIN 1478
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 20.6 bits (41), Expect = 4.7
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -2
Query: 246 AGSRHRSRTTWPQP 205
AGS+H + TW P
Sbjct: 334 AGSKHLLQNTWLDP 347
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 20.6 bits (41), Expect = 4.7
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -3
Query: 209 NHLREISSIEFER 171
N +RE+ EFER
Sbjct: 852 NRIRELKGFEFER 864
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 20.6 bits (41), Expect = 4.7
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 3 TRVVSHTSQHSKVIMAQIK 59
+++VSH H K + Q K
Sbjct: 232 SQIVSHVVNHEKALREQAK 250
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 20.2 bits (40), Expect = 6.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 73 LTVGILICAIITF 35
L GIL+C ++TF
Sbjct: 698 LLSGILLCYLVTF 710
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 19.8 bits (39), Expect = 8.1
Identities = 6/33 (18%), Positives = 16/33 (48%)
Frame = +1
Query: 55 LKYQQSSSTMGWKSQQSATEPGSELANRHKKIV 153
+ Y+Q++ T WK+ + L + + ++
Sbjct: 207 ISYEQTAITYVWKNDEGTLRKSPSLTSLNAYLI 239
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 19.8 bits (39), Expect = 8.1
Identities = 6/33 (18%), Positives = 16/33 (48%)
Frame = +1
Query: 55 LKYQQSSSTMGWKSQQSATEPGSELANRHKKIV 153
+ Y+Q++ T WK+ + L + + ++
Sbjct: 207 ISYEQTAITYVWKNDEGTLRKSPSLTSLNAYLI 239
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 19.8 bits (39), Expect = 8.1
Identities = 6/33 (18%), Positives = 16/33 (48%)
Frame = +1
Query: 55 LKYQQSSSTMGWKSQQSATEPGSELANRHKKIV 153
+ Y+Q++ T WK+ + L + + ++
Sbjct: 258 ISYEQTAITYVWKNDEGTLRKSPSLTSLNAYLI 290
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 19.8 bits (39), Expect = 8.1
Identities = 6/33 (18%), Positives = 16/33 (48%)
Frame = +1
Query: 55 LKYQQSSSTMGWKSQQSATEPGSELANRHKKIV 153
+ Y+Q++ T WK+ + L + + ++
Sbjct: 207 ISYEQTAITYVWKNDEGTLRKSPSLTSLNAYLI 239
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 19.8 bits (39), Expect = 8.1
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -3
Query: 140 CLFANSEPG 114
C+F SEPG
Sbjct: 70 CIFVTSEPG 78
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,741
Number of Sequences: 438
Number of extensions: 2000
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6719922
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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