Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_D05
(136 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 1.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 1.8
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 20 2.4
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 20 3.1
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 19 4.1
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 19 4.1
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 19 4.1
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 19 4.1
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 19 4.1
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 19 4.1
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 19 4.1
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 19 4.1
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 19 4.1
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 19 4.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 19 4.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 19 4.1
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 115 KIVTNKVNYNNIALRYL 65
KI+ N N+N++ R L
Sbjct: 390 KIINNDFNFNDVNFRIL 406
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.6 bits (41), Expect = 1.8
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 103 NKVNYNNIALRYLNIWSIIYSP 38
N NYNN Y NI +I P
Sbjct: 342 NNNNYNNYKKLYYNIINIEQIP 363
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 20.2 bits (40), Expect = 2.4
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = -1
Query: 76 LRYLNIWSIIYSPRAENP 23
+RY++ W +Y P + P
Sbjct: 226 VRYVSQWEEVYIPLYQQP 243
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 19.8 bits (39), Expect = 3.1
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = -1
Query: 82 IALRYLN--IWSIIYSPRAENP 23
I+L LN I++II SP+ NP
Sbjct: 10 ISLIILNDEIYNIIASPQLNNP 31
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 103 NKVNYNNIALRYLNI 59
N NYNN Y NI
Sbjct: 99 NNNNYNNYKKLYYNI 113
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 103 NKVNYNNIALRYLNI 59
N NYNN Y NI
Sbjct: 99 NNNNYNNYKKLYYNI 113
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 103 NKVNYNNIALRYLNI 59
N NYNN Y NI
Sbjct: 99 NNNNYNNYKKLYYNI 113
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 103 NKVNYNNIALRYLNI 59
N NYNN Y NI
Sbjct: 99 NNNNYNNYKKLYYNI 113
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 103 NKVNYNNIALRYLNI 59
N NYNN Y NI
Sbjct: 99 NNNNYNNYKKLYYNI 113
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 103 NKVNYNNIALRYLNI 59
N NYNN Y NI
Sbjct: 99 NNNNYNNYKKLYYNI 113
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 103 NKVNYNNIALRYLNI 59
N NYNN Y NI
Sbjct: 99 NNNNYNNYKKLYYNI 113
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 103 NKVNYNNIALRYLNI 59
N NYNN Y NI
Sbjct: 99 NNNNYNNYKKLYYNI 113
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 103 NKVNYNNIALRYLNI 59
N NYNN Y NI
Sbjct: 97 NNNNYNNYKKLYYNI 111
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 103 NKVNYNNIALRYLNI 59
N NYNN Y NI
Sbjct: 107 NNNNYNNYKKLYYNI 121
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 19.4 bits (38), Expect = 4.1
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 60 FGP*FIRLVPKILQPXG 10
+G +IRL+PK+ G
Sbjct: 517 YGLPYIRLIPKVTAVAG 533
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 19.4 bits (38), Expect = 4.1
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 60 FGP*FIRLVPKILQPXG 10
+G +IRL+PK+ G
Sbjct: 517 YGLPYIRLIPKVTAVAG 533
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,505
Number of Sequences: 438
Number of extensions: 546
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 25
effective length of database: 135,393
effective search space used: 2572467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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