Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_D04
         (292 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006673-3|AAF39929.1|  861|Caenorhabditis elegans Hypothetical ...    28   0.97 
U58757-2|AAC47915.2|  402|Caenorhabditis elegans Hypothetical pr...    27   1.7  
U13072-7|AAK31398.2|  382|Caenorhabditis elegans Nematode astaci...    26   3.9  
AJ561203-1|CAD99206.1|  279|Caenorhabditis elegans NAS-7 protein...    26   3.9  
Z82261-7|CAH60757.2|  300|Caenorhabditis elegans Hypothetical pr...    26   5.2  
U80954-4|AAB38097.2|  426|Caenorhabditis elegans Hypothetical pr...    26   5.2  
U64833-6|AAK95861.1|  350|Caenorhabditis elegans Hypothetical pr...    25   6.8  
Z81527-2|CAB04270.1|  361|Caenorhabditis elegans Hypothetical pr...    25   9.1  
Z81477-8|CAC70076.1|  739|Caenorhabditis elegans Hypothetical pr...    25   9.1  
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr...    25   9.1  
AL117201-6|CAB55065.2|  739|Caenorhabditis elegans Hypothetical ...    25   9.1  
AL033514-16|CAA22103.2|  465|Caenorhabditis elegans Hypothetical...    25   9.1  
AL023828-6|CAA19451.1|  371|Caenorhabditis elegans Hypothetical ...    25   9.1  

>AC006673-3|AAF39929.1|  861|Caenorhabditis elegans Hypothetical
           protein K09D9.11 protein.
          Length = 861

 Score = 28.3 bits (60), Expect = 0.97
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +1

Query: 136 LRLIAANIRILSTTTRVASI*QDYINKDMYSRESLNTQVTAKPRFV 273
           L+LI+ + RILS  T   SI    I KD+  R+ ++  +   P+ +
Sbjct: 28  LQLISEDFRILSRVTNAISIQASVIRKDVKIRDVISEFLLITPKLL 73


>U58757-2|AAC47915.2|  402|Caenorhabditis elegans Hypothetical
           protein C01B10.3 protein.
          Length = 402

 Score = 27.5 bits (58), Expect = 1.7
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +3

Query: 147 RRKHTNSLYDNACSEYLTGLYQQRHVFAREFEHSGDGQAEV 269
           R  H +S+  N C  ++   + Q + F R+F ++ DG  ++
Sbjct: 118 RSGHQHSIGSNECDGFIQNTFGQNYTFRRDF-YNDDGTRDL 157


>U13072-7|AAK31398.2|  382|Caenorhabditis elegans Nematode astacin
           protease protein 7 protein.
          Length = 382

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 174 DNACSEYLTGLYQQRHVFAREFEH 245
           DN C EY T +++  HV     EH
Sbjct: 160 DNGCMEYATIIHEMMHVVGFYHEH 183


>AJ561203-1|CAD99206.1|  279|Caenorhabditis elegans NAS-7 protein
           protein.
          Length = 279

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 174 DNACSEYLTGLYQQRHVFAREFEH 245
           DN C EY T +++  HV     EH
Sbjct: 100 DNGCMEYATIIHEMMHVVGFYHEH 123


>Z82261-7|CAH60757.2|  300|Caenorhabditis elegans Hypothetical
           protein C35D6.10 protein.
          Length = 300

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 13/58 (22%), Positives = 29/58 (50%)
 Frame = -3

Query: 179 VVVERIRMFAAIKRKLLLTILNNLSDVLFLNLEVHNNIKLIVFRLVIFLINVIFEYFP 6
           +++  + M + +   L L+ILN +  + +L     NN+ + +F L+  ++     Y P
Sbjct: 180 IILFCMAMSSVLSSLLHLSILNKIRKLAYLESTQLNNLYIYIFWLITTVVMFKVIYIP 237


>U80954-4|AAB38097.2|  426|Caenorhabditis elegans Hypothetical
           protein T07F8.2 protein.
          Length = 426

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 77  VPPDLKIIHPISYLISL 127
           VPP +K++H ISY  S+
Sbjct: 359 VPPSMKVLHSISYRSSI 375


>U64833-6|AAK95861.1|  350|Caenorhabditis elegans Hypothetical
           protein B0507.8 protein.
          Length = 350

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +1

Query: 94  NNTSDKLFNIVNNNLRLIAANIRILS 171
           ++  D LFNI+ NNL+ IA N R+++
Sbjct: 299 SDLKDDLFNII-NNLQPIAENRRVIT 323


>Z81527-2|CAB04270.1|  361|Caenorhabditis elegans Hypothetical
           protein F35E12.2 protein.
          Length = 361

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 216 FVDIILSNTRYTRCRRENSYVC 151
           F+ +IL    YT    ENS+VC
Sbjct: 3   FITLILDFLTYTSISAENSFVC 24


>Z81477-8|CAC70076.1|  739|Caenorhabditis elegans Hypothetical
           protein Y53H1C.3 protein.
          Length = 739

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 285 LPKWHEPRLGRHLSVQTLSRIHVFVDI 205
           L K  E    +++S+ T S +H+F+D+
Sbjct: 196 LTKKEEAAFNKYISIYTNSAVHMFLDL 222


>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
            K10C2.1 protein.
          Length = 2314

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 177  NACSEYLTGLYQQRHVFARE-FEHSGDGQAEVRAIL 281
            +AC++ + GLY Q+H      F+H  D +  +R ++
Sbjct: 925  SACNDTINGLYVQQHNDTTSVFQHILDSKYPLRVLI 960


>AL117201-6|CAB55065.2|  739|Caenorhabditis elegans Hypothetical
           protein Y53H1C.3 protein.
          Length = 739

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 285 LPKWHEPRLGRHLSVQTLSRIHVFVDI 205
           L K  E    +++S+ T S +H+F+D+
Sbjct: 196 LTKKEEAAFNKYISIYTNSAVHMFLDL 222


>AL033514-16|CAA22103.2|  465|Caenorhabditis elegans Hypothetical
           protein Y75B8A.16 protein.
          Length = 465

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 98  LFLNLEVHNNIKLIVFRLVIFLINVIFE 15
           LF N EVHN I   +F L       +FE
Sbjct: 34  LFKNYEVHNRIVQFIFSLTFAFSCSLFE 61


>AL023828-6|CAA19451.1|  371|Caenorhabditis elegans Hypothetical
           protein Y17G7B.4 protein.
          Length = 371

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 111 LIGCIIFKSGGTQQY*INCIQTCYI 37
           L+ CI+  +GG ++  I C++  Y+
Sbjct: 131 LVDCIVTSAGGIEEDLIKCLKPSYL 155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,212,534
Number of Sequences: 27780
Number of extensions: 107254
Number of successful extensions: 274
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 280685548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)