Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_D04
         (292 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    25   0.25 
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   0.76 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   1.8  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   3.1  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         20   5.4  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    20   5.4  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    20   5.4  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    20   5.4  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    20   5.4  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    20   5.4  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    20   5.4  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    20   5.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   7.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   7.1  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    19   9.4  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 24.6 bits (51), Expect = 0.25
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +1

Query: 115 FNIVNNNLRLIAANIRILSTTTRVASI*QDYINKDMYSRES 237
           FN    N R++ AN+  L   TR A       N++ Y  ++
Sbjct: 394 FNFDEVNFRILGANVNNLIKNTRCAKSNNQNNNQNKYKNQA 434


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 0.76
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 103 SDKLFNIVNNNLRLIAANIRIL 168
           SD+  N++NN+L L   N +IL
Sbjct: 380 SDRNQNVLNNDLNLEHVNFQIL 401


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 107 ISYLISLTITCV*SPQTYEFSLR 175
           IS   S+TI C+ SP+ Y   +R
Sbjct: 886 ISLSASVTIACLFSPKLYIILIR 908


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 115 FNIVNNNLRLIAANIRILSTTTR 183
           FN  + N R++ AN+  L   TR
Sbjct: 396 FNFNDVNFRILGANVDDLMRNTR 418



 Score = 20.2 bits (40), Expect = 5.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 103 SDKLFNIVNNNLRLIAANIRIL 168
           S+++  I+NN+      N RIL
Sbjct: 385 SNRMQKIINNDFNFNDVNFRIL 406


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 115 FNIVNNNLRLIAANIRILSTTTR 183
           FN  + N R++ AN+  L   TR
Sbjct: 393 FNFDDVNFRIMNANVNELILNTR 415


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +1

Query: 91  KNNTSDKLFNIVNNNLRLIAANIRILSTTTRVASI*QDY-INKDM-YSRESLNTQVTAKP 264
           +++  D   NIV+ + + +     I  +  R + I   Y +N+ + Y R S+   VT+KP
Sbjct: 351 ESDYQDAFCNIVSCSPQTVHPETIIDVSRRRSSLICDVYGVNESVSYERGSMTVSVTSKP 410


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = +3

Query: 15  FKNYI-Y*KYNKSEYN*FNIVVY 80
           + NY  Y  YN + YN +N  +Y
Sbjct: 324 YSNYNNYNNYNNNNYNNYNKKLY 346


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = -1

Query: 256 PSPECSNSLANTCLC 212
           P P+    L N C C
Sbjct: 473 PGPQVETILQNACFC 487


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 217 DMYSRESLNTQVTAKPRFV 273
           D YS ES+N Q     RF+
Sbjct: 799 DFYSEESINNQGLECLRFL 817


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 115 FNIVNNNLRLIAANIRILSTTTR 183
           FN  + N R++ AN+  L   TR
Sbjct: 393 FNFDDVNFRIMNANVNELILNTR 415


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 115 FNIVNNNLRLIAANIRILSTTTR 183
           FN  + N R++ AN+  L   TR
Sbjct: 393 FNFDDVNFRIMNANVNELILNTR 415


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 115 FNIVNNNLRLIAANIRILSTTT 180
           FN  + N R++ AN++ L   T
Sbjct: 391 FNFDDVNFRILGANVKELIRNT 412



 Score = 19.4 bits (38), Expect = 9.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 103 SDKLFNIVNNNLRLIAANIRILSTTTR 183
           S+++  IVN++      N RIL    +
Sbjct: 380 SNRMQKIVNDDFNFDDVNFRILGANVK 406


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 153 KHTNSLYD 176
           KH NSLYD
Sbjct: 601 KHDNSLYD 608


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 201 LSNTRYTRCRRENSYVC 151
           L N +YTR    +SY C
Sbjct: 680 LKNMKYTRSADLSSYNC 696


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 292 ARVTKMARTSAWPSPECSNSLA 227
           A++ +    ++W SPE   S+A
Sbjct: 145 AKIIRTPTEASWHSPEAHISVA 166


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,279
Number of Sequences: 438
Number of extensions: 1886
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5869407
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)