Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_C22
         (75 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    40   1e-05
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         22   2.2  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         22   2.2  

>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 39.5 bits (88), Expect = 1e-05
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = +2

Query: 26  PDASKPEDWDDEMDGE 73
           PDA+KP+DWDDEMDGE
Sbjct: 242 PDATKPDDWDDEMDGE 257



 Score = 27.9 bits (59), Expect = 0.045
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +2

Query: 26  PDASKPEDWDD 58
           P+A KPEDWDD
Sbjct: 208 PEAKKPEDWDD 218



 Score = 25.0 bits (52), Expect = 0.32
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 26  PDASKPEDWD 55
           PD +KPEDWD
Sbjct: 225 PDDTKPEDWD 234


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 71  LHPSHHPNL 45
           LHP+HHP L
Sbjct: 179 LHPAHHPAL 187


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 71  LHPSHHPNL 45
           LHP+HHP L
Sbjct: 179 LHPAHHPAL 187


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,516
Number of Sequences: 2352
Number of extensions: 500
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 6
effective length of database: 549,867
effective search space used:  9897606
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)