Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_C19
(171 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 21 1.0
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 21 1.4
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 19 5.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 19 5.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 19 5.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 19 5.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 19 5.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 19 5.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 19 5.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 19 5.5
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 19 5.5
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 19 7.3
DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein. 18 9.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 18 9.7
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 18 9.7
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 21.4 bits (43), Expect = 1.0
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +3
Query: 60 LWLNSAREQIKSEHPGLKV 116
+W + R + K ++PGL V
Sbjct: 54 IWFQNRRTKWKKQNPGLDV 72
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.0 bits (42), Expect = 1.4
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +3
Query: 135 GGEMWKSMKDK 167
GGE+W ++DK
Sbjct: 450 GGELWTVLRDK 460
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 19.0 bits (37), Expect = 5.5
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 15 NKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGG 140
++ D+ P ML+L ++ PG K+T+ GG
Sbjct: 283 HRTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGG 324
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 19.0 bits (37), Expect = 5.5
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 15 NKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGG 140
++ D+ P ML+L ++ PG K+T+ GG
Sbjct: 283 HRTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGG 324
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 19.0 bits (37), Expect = 5.5
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 15 NKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGG 140
++ D+ P ML+L ++ PG K+T+ GG
Sbjct: 283 HRTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGG 324
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 19.0 bits (37), Expect = 5.5
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 15 NKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGG 140
++ D+ P ML+L ++ PG K+T+ GG
Sbjct: 283 HRTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGG 324
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 19.0 bits (37), Expect = 5.5
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 15 NKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGG 140
++ D+ P ML+L ++ PG K+T+ GG
Sbjct: 283 HRTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGG 324
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 19.0 bits (37), Expect = 5.5
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 15 NKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGG 140
++ D+ P ML+L ++ PG K+T+ GG
Sbjct: 283 HRTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGG 324
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.0 bits (37), Expect = 5.5
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 15 NKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGG 140
++ D+ P ML+L ++ PG K+T+ GG
Sbjct: 351 HRTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGG 392
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.0 bits (37), Expect = 5.5
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 15 NKMTDKPKRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGG 140
++ D+ P ML+L ++ PG K+T+ GG
Sbjct: 351 HRTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGG 392
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 19.0 bits (37), Expect = 5.5
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = +3
Query: 87 IKSEHPGLKVTEIAKK 134
I ++ PGL+ TE+ ++
Sbjct: 346 IAADRPGLRNTELVER 361
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 18.6 bits (36), Expect = 7.3
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 15 NKMTDKPKRPMS 50
NKM+ + KRP S
Sbjct: 102 NKMSTRGKRPAS 113
>DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein.
Length = 135
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1
Query: 49 QPICCGST 72
QPIC G T
Sbjct: 30 QPICVGET 37
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 18.2 bits (35), Expect = 9.7
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = -2
Query: 128 GYFSDFQPRMFRLDLFSGTVEPQHI 54
G + + + R + L +GT+ QH+
Sbjct: 752 GEYEELRERAYTKILSNGTLLLQHV 776
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 18.2 bits (35), Expect = 9.7
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = -2
Query: 128 GYFSDFQPRMFRLDLFSGTVEPQHI 54
G + + + R + L +GT+ QH+
Sbjct: 748 GEYEELRERAYTKILSNGTLLLQHV 772
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,969
Number of Sequences: 438
Number of extensions: 638
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 36
effective length of database: 130,575
effective search space used: 2611500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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