Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_C17
         (237 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   0.65 
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   0.86 
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   1.1  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       23   1.5  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    22   2.6  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     22   2.6  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    22   2.6  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    21   4.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    21   6.0  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    21   6.0  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    21   8.0  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          21   8.0  
AY341149-1|AAR13713.1|  164|Anopheles gambiae aminopeptidase N p...    21   8.0  
AY341147-1|AAR13711.1|  164|Anopheles gambiae aminopeptidase N p...    21   8.0  
AY341146-1|AAR13710.1|  164|Anopheles gambiae aminopeptidase N p...    21   8.0  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    21   8.0  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 0.65
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 67   DVSHFVHFHVRGKWNSSMCADL 2
            + +HFVH   RG+W S M  +L
Sbjct: 1121 ECAHFVHLCNRGQWPSWMKQNL 1142


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.8 bits (49), Expect = 0.86
 Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +1

Query: 163 SRRDREQAR-PRQDPTETHQH 222
           S+R+R Q R PR+DP    QH
Sbjct: 219 SQRNRSQQRSPRRDPPINRQH 239


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 93  TAPLPLMSTMSPTLYTFMYVE 31
           TA +P  S + PTL+  MY E
Sbjct: 607 TAGVPQGSVLGPTLWNLMYNE 627


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 85  IAPNVNDVSHFVHFH 41
           + P+VND++H  H H
Sbjct: 531 LTPSVNDLNHPFHLH 545


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 93  TAPLPLMSTMSPTLYTFMY 37
           TA +P  S + PTL+  MY
Sbjct: 683 TAGVPQGSILGPTLWNIMY 701


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 168 PRACAVTLXTRPVLPWYNLCGIP 100
           P    V +  RP  PW+++ GIP
Sbjct: 68  PAIQPVGIFGRPGRPWWSVPGIP 90


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 93  TAPLPLMSTMSPTLYTFMY 37
           TA +P  S + PTL+  MY
Sbjct: 629 TAGVPQGSILGPTLWNIMY 647


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 93  TAPLPLMSTMSPTLYTFMY 37
           T+ +P  S + PTL+  MY
Sbjct: 602 TSGVPQGSVLGPTLWNLMY 620


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 169 RDREQARPRQDPTETHQHPH 228
           R+RE+ R R+     H  PH
Sbjct: 525 RERERERERERERMMHMMPH 544


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
 Frame = +1

Query: 154 RTRSRRDREQARPRQDPTETHQH-PHRAR 237
           R RSR  R  + PR  PT   +  P R R
Sbjct: 277 RRRSRSTRPTSWPRSRPTSKPKRLPRRRR 305


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 99  FCTAPLPLMSTMSPTLYT 46
           FCT+ +P    +SP L++
Sbjct: 667 FCTSGVPQGCVLSPLLFS 684


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 11  THGTIPLSTYMKVYKVGDIVDIRGNGAVQK 100
           THG++  S   K  K    V++RG G   K
Sbjct: 211 THGSLMGSRTEKSKKTFPTVELRGYGGEAK 240


>AY341149-1|AAR13713.1|  164|Anopheles gambiae aminopeptidase N
           protein.
          Length = 164

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 16  WNYSTFHVHESV 51
           W   T+HVH+SV
Sbjct: 76  WIPITYHVHQSV 87


>AY341147-1|AAR13711.1|  164|Anopheles gambiae aminopeptidase N
           protein.
          Length = 164

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 16  WNYSTFHVHESV 51
           W   T+HVH+SV
Sbjct: 76  WIPITYHVHQSV 87


>AY341146-1|AAR13710.1|  164|Anopheles gambiae aminopeptidase N
           protein.
          Length = 164

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 16  WNYSTFHVHESV 51
           W   T+HVH+SV
Sbjct: 76  WIPITYHVHQSV 87


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 93  TAPLPLMSTMSPTLYTFMY 37
           +A +P  S + PTL+  MY
Sbjct: 698 SAGVPQGSILGPTLWNMMY 716


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 284,405
Number of Sequences: 2352
Number of extensions: 5932
Number of successful extensions: 21
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 52
effective length of database: 441,675
effective search space used: 11483550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)