Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_C17
         (237 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   0.67 
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   2.0  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    20   3.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   3.6  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    20   4.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    19   6.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   8.3  

>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.6 bits (46), Expect = 0.67
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = -1

Query: 102 PFCTAPLP-LMSTMSPTLYTFMYVESGIVPCVRI 4
           P C  P P +   ++    T  Y  + IVPCV I
Sbjct: 216 PCCDEPYPDIFFNITLRRKTLFYTVNLIVPCVSI 249


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -1

Query: 168 PRACAVTLXTRPVLPWYNLC 109
           P+     L T P + WY+ C
Sbjct: 170 PQTIVFHLETHPNVTWYSQC 189


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.2 bits (40), Expect = 3.6
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = -1

Query: 159 CAVTLXTRPVLPWYNLCGIPFCTAPLPLMSTM 64
           CA+     P  P Y L  I F   P+  ++ +
Sbjct: 193 CAMLKENMPEFPLYQLSCILFFLIPMVFIAVL 224


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 3.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 226 ADVDAFR*DPAADALVHDHAES 161
           A +D    DP+++  VH  +ES
Sbjct: 565 ASIDDSDPDPSSEPTVHSQSES 586


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 19.8 bits (39), Expect = 4.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 154 GHIVXTPCLTVV*FVWHTLLYSAI 83
           G+++   CLTVV   + + + S I
Sbjct: 380 GYLLGIQCLTVVCLAFWSFIVSTI 403


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.4 bits (38), Expect = 6.2
 Identities = 6/16 (37%), Positives = 8/16 (50%)
 Frame = -2

Query: 62  LPLCTLSCTWKVE*FH 15
           LP     CTW +  +H
Sbjct: 63  LPYSGSKCTWTITSYH 78


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +1

Query: 205 TETHQHPH 228
           + TH HPH
Sbjct: 642 SSTHSHPH 649


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,916
Number of Sequences: 438
Number of extensions: 1437
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  3898467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)