Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_C13
(302 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical pr... 124 2e-29
AF067214-6|AAC17005.2| 457|Caenorhabditis elegans Hypothetical ... 31 0.21
Z81055-1|CAB02889.1| 618|Caenorhabditis elegans Hypothetical pr... 28 1.1
Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical pr... 28 1.1
AC006777-5|AAK72311.1| 247|Caenorhabditis elegans Hypothetical ... 27 3.4
Z81513-10|CAB04183.1| 247|Caenorhabditis elegans Hypothetical p... 26 4.5
Z34533-5|CAA84298.1| 781|Caenorhabditis elegans Hypothetical pr... 26 4.5
Z81513-11|CAB04184.2| 254|Caenorhabditis elegans Hypothetical p... 26 6.0
Z73975-1|CAA98276.1| 282|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 25 7.9
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 25 7.9
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 25 7.9
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 25 7.9
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 25 7.9
M77697-7|AAA27902.6| 903|Caenorhabditis elegans Hypothetical pr... 25 7.9
L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical pr... 25 7.9
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 25 7.9
>Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical
protein F10B5.1 protein.
Length = 214
Score = 124 bits (298), Expect = 2e-29
Identities = 57/98 (58%), Positives = 73/98 (74%)
Frame = +3
Query: 9 DRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVS 188
DRLQTGMRGA+GKPQG VARV IG + S+R + IEA RRAKFKFPGRQ I S
Sbjct: 109 DRLQTGMRGAYGKPQGLVARVDIGDILFSMRIKEGNVKHAIEAFRRAKFKFPGRQIIVSS 168
Query: 189 KKWGFSTYEREEFEKLRDAGRIANDGCNVKYRPEHGPL 302
+KWGF+ ++RE++E++R GR+ +DG V+ + EHGPL
Sbjct: 169 RKWGFTKWDREDYERMRAEGRLRSDGVGVQLQREHGPL 206
>AF067214-6|AAC17005.2| 457|Caenorhabditis elegans Hypothetical
protein F56C3.2 protein.
Length = 457
Score = 30.7 bits (66), Expect = 0.21
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 135 ALRRAKFKFPGRQKIYVSKKWGFSTYEREEFE 230
+ + AKF+FP + +S+ + TY++EEFE
Sbjct: 394 SFQEAKFQFPRIELHQISELFNLGTYQKEEFE 425
>Z81055-1|CAB02889.1| 618|Caenorhabditis elegans Hypothetical
protein F01G10.1 protein.
Length = 618
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 30 RGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIE--ALRRAKFKFPGRQK 176
R GKP +A+ G+ I + + D W + + + K +F G QK
Sbjct: 228 RSTKGKPTAIIAKTLKGKGIEGIENEDNWHGKPVPEGTVNAIKARFHGSQK 278
>Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical
protein C09G5.2 protein.
Length = 476
Score = 28.3 bits (60), Expect = 1.1
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -2
Query: 49 GFPNAPRIPVWSLS 8
GFPN+P +P+W LS
Sbjct: 232 GFPNSPLLPIWLLS 245
>AC006777-5|AAK72311.1| 247|Caenorhabditis elegans Hypothetical
protein Y46H3D.8 protein.
Length = 247
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 35 CVRETPRHSSACAYWTAHYVCT 100
C T SSACA W A+ CT
Sbjct: 206 CTSYTADSSSACASWAANGFCT 227
>Z81513-10|CAB04183.1| 247|Caenorhabditis elegans Hypothetical
protein F26D2.13 protein.
Length = 247
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 35 CVRETPRHSSACAYWTAHYVCT 100
C P SS+CA W A+ CT
Sbjct: 206 CTSYIPDSSSSCASWAANGFCT 227
>Z34533-5|CAA84298.1| 781|Caenorhabditis elegans Hypothetical
protein B0285.7 protein.
Length = 781
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +2
Query: 29 AWCVRETPRHSSACAYWTAHYVCT 100
A CV R C+YW VCT
Sbjct: 746 ACCVEHAIREMRKCSYWDIQDVCT 769
>Z81513-11|CAB04184.2| 254|Caenorhabditis elegans Hypothetical
protein F26D2.14 protein.
Length = 254
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 35 CVRETPRHSSACAYWTAHYVCT 100
C P SS+CA W A+ CT
Sbjct: 213 CSSYNPDSSSSCAAWAANGFCT 234
>Z73975-1|CAA98276.1| 282|Caenorhabditis elegans Hypothetical
protein T06E8.1 protein.
Length = 282
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -1
Query: 194 LLRYIDLLATRELELSTTQSLNDLCLPTVT*AYR 93
++R +D + T+ L L L+D+C + AY+
Sbjct: 225 VIRVLDAIPTKGLTLDDVSELSDMCRDVMLAAYK 258
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 65 RYCALGFPERTTHP 24
R C GFP RT HP
Sbjct: 710 RICRKGFPNRTLHP 723
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 65 RYCALGFPERTTHP 24
R C GFP RT HP
Sbjct: 710 RICRKGFPNRTLHP 723
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 65 RYCALGFPERTTHP 24
R C GFP RT HP
Sbjct: 708 RICRKGFPNRTQHP 721
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 65 RYCALGFPERTTHP 24
R C GFP RT HP
Sbjct: 708 RICRKGFPNRTQHP 721
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 65 RYCALGFPERTTHP 24
R C GFP RT HP
Sbjct: 716 RICRKGFPNRTLHP 729
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 65 RYCALGFPERTTHP 24
R C GFP RT HP
Sbjct: 716 RICRKGFPNRTLHP 729
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain
2 protein.
Length = 1947
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 65 RYCALGFPERTTHP 24
R C GFP RT HP
Sbjct: 716 RICRKGFPNRTLHP 729
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 65 RYCALGFPERTTHP 24
R C GFP RT HP
Sbjct: 708 RICRKGFPNRTQHP 721
>M77697-7|AAA27902.6| 903|Caenorhabditis elegans Hypothetical
protein B0303.11 protein.
Length = 903
Score = 25.4 bits (53), Expect = 7.9
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -1
Query: 191 LRYIDLLATRELELSTTQSLNDLCLPTVT*AYRHNGLSNTHTRYCALGFPERTTHPSL 18
+R + LL+T ++ +S S + LC+PT L N + L PE + P+L
Sbjct: 344 IRCLLLLSTVQILVSAIGSYDILCIPTTVFYLFAYALFNFYVFLVKLSDPEIPSPPTL 401
>L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical
protein ZK353.8 protein.
Length = 469
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 84 PIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFSTYEREEFEKLRDA 245
PI S +S ++ E + RAK +++ KK + +EE K R+A
Sbjct: 155 PIQSSSTSQEMTRELAEKVARAKALLEQKKQKDAEKKREADKHVKEEMTKAREA 208
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 65 RYCALGFPERTTHP 24
R C GFP RT HP
Sbjct: 713 RICRKGFPNRTLHP 726
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,284,875
Number of Sequences: 27780
Number of extensions: 135209
Number of successful extensions: 343
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 343
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 323867940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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