Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_C08
(316 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 152 7e-40
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 152 7e-40
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 128 1e-32
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 126 5e-32
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 23 0.76
AM712905-1|CAN84644.1| 102|Tribolium castaneum hypothetical pro... 21 2.3
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 21 4.0
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 20 5.4
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 20 5.4
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 152 bits (369), Expect = 7e-40
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 152 bits (369), Expect = 7e-40
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 7e-40
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 152 bits (369), Expect = 7e-40
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 7e-40
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 7e-40
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 152 bits (369), Expect = 7e-40
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 152 bits (369), Expect = 7e-40
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 152 bits (369), Expect = 7e-40
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 150 bits (363), Expect = 4e-39
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQR IFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 440
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 128 bits (310), Expect = 1e-32
Identities = 62/64 (96%), Positives = 62/64 (96%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 217 FQKE 228
QKE
Sbjct: 61 IQKE 64
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 126 bits (304), Expect = 5e-32
Identities = 61/64 (95%), Positives = 61/64 (95%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQR IFAGKQLEDGRTLSDYN
Sbjct: 49 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 108
Query: 217 FQKE 228
QKE
Sbjct: 109 IQKE 112
Score = 101 bits (241), Expect = 2e-24
Identities = 47/48 (97%), Positives = 47/48 (97%)
Frame = +1
Query: 121 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNFQKESTLHLVLRLRGG 264
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN QKESTLHLVLRLRGG
Sbjct: 1 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 48
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 23.0 bits (47), Expect = 0.76
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -3
Query: 128 WIFAFTFSIVSEASTSRVIVFPVRVFTKICIV 33
WI +T S +S+ + F V + K C+V
Sbjct: 167 WIVLYTLSKMSQVMLIQFCAFVVVLKQKFCVV 198
>AM712905-1|CAN84644.1| 102|Tribolium castaneum hypothetical
protein protein.
Length = 102
Score = 21.4 bits (43), Expect = 2.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 130 LGSSPLHFRSYLKPRLR 80
LGSS L RS+ + R+R
Sbjct: 33 LGSSSLPLRSFYRSRIR 49
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 20.6 bits (41), Expect = 4.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 315 FLTAVLHSPDAKRW 274
F+T+VL S A RW
Sbjct: 103 FMTSVLFSQVASRW 116
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 20.2 bits (40), Expect = 5.4
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +1
Query: 46 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNF-Q 222
FVK + + + + E V + D I DQ+ AG E+ LS + F
Sbjct: 231 FVKVFRPEPLCERLFEASREEYVTRHLIDGRIIGCDQRISFIAGYMTEEVSGLSAFKFMH 290
Query: 223 KESTLHLVLRLR 258
+E +++ LR
Sbjct: 291 REDVRWVMIALR 302
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 20.2 bits (40), Expect = 5.4
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 69 NYHPRSRGFRYDRK 110
NY+P ++GFR + K
Sbjct: 192 NYNPFAKGFRENGK 205
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,636
Number of Sequences: 336
Number of extensions: 1807
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used: 5836655
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -