Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_C08
         (316 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.    152   3e-39
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            22   6.2  
DQ974171-1|ABJ52811.1|  403|Anopheles gambiae serpin 14 protein.       21   8.2  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    21   8.2  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score =  152 bits (369), Expect = 3e-39
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = +1

Query: 37  MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 217 FQKESTLHLVLRLRGG 264
            QKESTLHLVLRLRGG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score =  152 bits (369), Expect = 3e-39
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = +1

Query: 37  MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 217 FQKESTLHLVLRLRGG 264
            QKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score =  152 bits (369), Expect = 3e-39
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = +1

Query: 37  MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 217 FQKESTLHLVLRLRGG 264
            QKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +3

Query: 75   HPRSRGFRYDRKCKGEDP 128
            HP   GF Y R     DP
Sbjct: 1777 HPSCEGFPYSRTIYANDP 1794


>DQ974171-1|ABJ52811.1|  403|Anopheles gambiae serpin 14 protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 287 MRRDGSIVPPLSLKTR*RVDSF 222
           M+R G +VP  S+KT      F
Sbjct: 285 MKRAGIVVPVFSIKTEFNATDF 306


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +1

Query: 133 KEGIPPDQQRLIFAGKQLEDGRTLSDYNFQKESTLHLVLRL 255
           K   P  Q R IF G+ +++   +     Q++   HL++ L
Sbjct: 588 KREFPDLQNRTIFTGRFVKELYDVRSGCVQEQDGTHLLMNL 628


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 360,760
Number of Sequences: 2352
Number of extensions: 6800
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 20748816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)