Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_C08
(316 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 177 2e-45
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 177 2e-45
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 155 5e-39
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 154 1e-38
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 154 1e-38
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 99 6e-22
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 84 2e-17
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 77 4e-15
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 65 1e-11
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 65 1e-11
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 56 4e-09
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 52 7e-08
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 45 1e-05
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 45 1e-05
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 42 9e-05
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 41 2e-04
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 41 2e-04
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 41 2e-04
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 39 9e-04
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 38 0.002
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 36 0.005
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 34 0.025
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 34 0.025
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 33 0.033
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 31 0.13
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 29 0.53
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 28 1.2
AC024843-5|AAK70666.3| 740|Caenorhabditis elegans Hypothetical ... 27 2.1
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 27 2.8
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 27 3.8
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 26 5.0
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 26 5.0
Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical pr... 26 5.0
U97404-2|AAB93309.1| 795|Caenorhabditis elegans Acid-sensing/am... 26 5.0
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 26 5.0
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 26 5.0
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 26 5.0
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 26 5.0
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical pr... 25 8.7
L15347-1|AAA28142.1| 813|Caenorhabditis elegans raf proto-oncog... 25 8.7
AY493414-1|AAR86713.1| 769|Caenorhabditis elegans LIN-45 isofor... 25 8.7
AY493413-1|AAR86712.1| 813|Caenorhabditis elegans LIN-45 isofor... 25 8.7
AY455928-1|AAR26307.1| 813|Caenorhabditis elegans LIN-45 protein. 25 8.7
AC024204-7|AAM97982.1| 614|Caenorhabditis elegans Abnormal cell... 25 8.7
AC024204-6|AAF36042.1| 813|Caenorhabditis elegans Abnormal cell... 25 8.7
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 177 bits (430), Expect = 2e-45
Identities = 86/93 (92%), Positives = 88/93 (94%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 217 FQKESTLHLVLRLRGGTIEPSLRIWAMKYSCEK 315
QKESTLHLVLRLRGG IEPSLR A KY+C+K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDK 93
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 177 bits (430), Expect = 2e-45
Identities = 86/93 (92%), Positives = 88/93 (94%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 217 FQKESTLHLVLRLRGGTIEPSLRIWAMKYSCEK 315
QKESTLHLVLRLRGG IEPSLR A KY+C+K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDK 93
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 155 bits (377), Expect = 5e-39
Identities = 76/78 (97%), Positives = 76/78 (97%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 217 FQKESTLHLVLRLRGGTI 270
QKESTLHLVLRLRGG I
Sbjct: 821 IQKESTLHLVLRLRGGDI 838
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760
Score = 152 bits (368), Expect = 6e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTL GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 152 bits (368), Expect = 6e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTL GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 97.5 bits (232), Expect = 2e-21
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 177
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 154 bits (374), Expect = 1e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 217 FQKESTLHLVLRLRGG 264
QKESTLHLVLRLRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760
Score = 154 bits (374), Expect = 1e-38
Identities = 75/78 (96%), Positives = 76/78 (97%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 217 FQKESTLHLVLRLRGGTI 270
QK+STLHLVLRLRGG I
Sbjct: 821 IQKQSTLHLVLRLRGGDI 838
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 99.1 bits (236), Expect = 6e-22
Identities = 46/76 (60%), Positives = 57/76 (75%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
M I VKTLTGK I L++E +D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 217 FQKESTLHLVLRLRGG 264
S LHLVL LRGG
Sbjct: 61 VLGGSVLHLVLALRGG 76
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 83.8 bits (198), Expect = 2e-17
Identities = 38/74 (51%), Positives = 52/74 (70%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 216
+ + VKTL GKTI + ++ +DT+E +K K+Q+K G+PPDQQRLIF QLE+ R L YN
Sbjct: 161 LTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYN 220
Query: 217 FQKESTLHLVLRLR 258
+ E +HLV R R
Sbjct: 221 IRDEDIIHLVSRHR 234
Score = 41.5 bits (93), Expect = 1e-04
Identities = 25/77 (32%), Positives = 40/77 (51%)
Frame = +1
Query: 13 IRHEGSVTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 192
+R + V + +TG IT VEASD I+++ K+ + + P ++ +D
Sbjct: 83 VRDKQGVVFTVSYGEVTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KD 136
Query: 193 GRTLSDYNFQKESTLHL 243
RT+SDYN + STL L
Sbjct: 137 QRTISDYNIKNGSTLRL 153
Score = 36.7 bits (81), Expect = 0.004
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +1
Query: 28 SVTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 144
S TM + VKT TGKTIT+E +NVK +++DK+G+
Sbjct: 56 SKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 76.6 bits (180), Expect = 4e-15
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 147
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 64.9 bits (151), Expect = 1e-11
Identities = 34/83 (40%), Positives = 55/83 (66%)
Frame = +1
Query: 43 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNFQ 222
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 223 KESTLHLVLRLRGGTIEPSLRIW 291
E+T+++ L L GG + +++
Sbjct: 57 SEATIYVNLELLGGAKKRKKKVY 79
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 64.9 bits (151), Expect = 1e-11
Identities = 34/83 (40%), Positives = 55/83 (66%)
Frame = +1
Query: 43 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNFQ 222
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 223 KESTLHLVLRLRGGTIEPSLRIW 291
E+T+++ L L GG + +++
Sbjct: 57 SEATIYVNLELLGGAKKRKKKVY 79
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 56.4 bits (130), Expect = 4e-09
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +1
Query: 40 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNF 219
QIFVK L G + ++ DT+ ++K I+ + IP L F+GK+LED ++ DYN
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
Query: 220 QKESTLHLVLR 252
QK ST+ + R
Sbjct: 214 QKSSTITMYFR 224
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 52.4 bits (120), Expect = 7e-08
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = +1
Query: 13 IRHEGSVTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE- 189
+ HEG ++I+V+ G+T TL+ ASDT+ +VKAKI +K I P+ Q+L+ L+
Sbjct: 98 LHHEG---IRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDL 153
Query: 190 --DGRTLSDYNFQKESTLHL 243
D TL D +F+ STL L
Sbjct: 154 FSDHSTLFDNSFENGSTLRL 173
Score = 29.9 bits (64), Expect = 0.40
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 144
M + +KT TGK IT+E S VK +++DK+G+
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
Score = 27.5 bits (58), Expect = 2.1
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEV 87
+ +FVKT TGKTIT+ +
Sbjct: 181 IDVFVKTYTGKTITISI 197
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 45.2 bits (102), Expect = 1e-05
Identities = 28/72 (38%), Positives = 37/72 (51%)
Frame = +1
Query: 40 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNF 219
Q FV+ L GKT TL V ASDT+E K ++ R+ + GK L D T +YN
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNI 98
Query: 220 QKESTLHLVLRL 255
ST+ L R+
Sbjct: 99 SNNSTMDLHFRI 110
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 45.2 bits (102), Expect = 1e-05
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = +1
Query: 43 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 180
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 41.9 bits (94), Expect = 9e-05
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = +1
Query: 61 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNFQKESTLH 240
+G L V SDTI VK I + R++ K LED TL+ YN Q+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 241 L 243
L
Sbjct: 241 L 241
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 41.1 bits (92), Expect = 2e-04
Identities = 17/69 (24%), Positives = 39/69 (56%)
Frame = +1
Query: 58 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNFQKESTL 237
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 238 HLVLRLRGG 264
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 41.1 bits (92), Expect = 2e-04
Identities = 17/69 (24%), Positives = 39/69 (56%)
Frame = +1
Query: 58 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNFQKESTL 237
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 238 HLVLRLRGG 264
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 40.7 bits (91), Expect = 2e-04
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Frame = +1
Query: 31 VTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTL 204
+ + + +TLT LE+ TI VKA + ++G P+ Q+LI+ GK L+D +
Sbjct: 50 MVLSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDDSVKV 109
Query: 205 SDYNFQKESTLHLVLRLRGGT-IEPS 279
+ F + ++L R T + PS
Sbjct: 110 GEVGFDSSKFVVVMLSKRKVTEVAPS 135
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 38.7 bits (86), Expect = 9e-04
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +1
Query: 79 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNFQKESTLHLVLRLR 258
L V SDTI ++K +I + R++ GK LED +L+ YN Q+ + + L L+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 37.5 bits (83), Expect = 0.002
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 79 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNFQKESTL 237
L V SDTI +K +I GI R K LED TL+ YN ++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 36.3 bits (80), Expect = 0.005
Identities = 18/66 (27%), Positives = 39/66 (59%)
Frame = +1
Query: 55 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNFQKEST 234
++ G+ ++ +++E +K KI+ + GIP + L GK L D + L+DY + +++
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADYKW--DTS 206
Query: 235 LHLVLR 252
+ L++R
Sbjct: 207 VELLVR 212
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 33.9 bits (74), Expect = 0.025
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = +1
Query: 34 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 213
T+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 20 TIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAA 79
Query: 214 NFQKESTLHLVLR 252
T+HLV R
Sbjct: 80 GISDGQTVHLVDR 92
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 33.9 bits (74), Expect = 0.025
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = +1
Query: 34 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 213
T+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 20 TIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAA 79
Query: 214 NFQKESTLHLVLR 252
T+HLV R
Sbjct: 80 GISDGQTVHLVDR 92
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 33.5 bits (73), Expect = 0.033
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = +1
Query: 52 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNFQKES 231
KT + +TL + + IE++ ++ IP D+ ++F GK+L + D + +
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPAT 72
Query: 232 TLHLV 246
+ L+
Sbjct: 73 QIMLL 77
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 31.5 bits (68), Expect = 0.13
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 58 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNFQKESTL 237
L G I +E+++ DTI V + G+ +QRL+ K+L+ +TL + + S +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 29.5 bits (63), Expect = 0.53
Identities = 12/56 (21%), Positives = 29/56 (51%)
Frame = +1
Query: 25 GSVTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 192
G +Q+ + + TGK++ + VE + +E D+EG+ L+ + ++ ++
Sbjct: 1145 GEDVLQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 37 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 144
M + +KT TGKTIT+E S VK +++ K+G+
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGV 31
>AC024843-5|AAK70666.3| 740|Caenorhabditis elegans Hypothetical
protein Y61A9LA.8 protein.
Length = 740
Score = 27.5 bits (58), Expect = 2.1
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 21 RGKRHNADFRKNP-NGENYHPRSRGFRYDRKCKGEDPR*GGHPPRSTATHLCRQAT 185
R KR R N + E H R+RG ++DR + R H + + + RQA+
Sbjct: 158 RSKRRRTRSRSNTYSDEEEHVRARGEKHDRHHHKDHRRGRSHERKIITSTIVRQAS 213
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 79 LEVEASDTIENVKAKIQDK-EGIPPDQQRLIFAGKQLEDGRTLSDYNFQKESTLHLVLRL 255
+EV S I V+ K+ + + L + G++L+D R++ YN + ++L +
Sbjct: 100 VEVRNSYLIRYVRVKVANLLNNDLVESFNLYYGGQKLQDNRSIGSYNIDQSREIYLKKKK 159
Query: 256 RGGTI 270
+ T+
Sbjct: 160 KLSTL 164
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 26.6 bits (56), Expect = 3.8
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 67 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 165
KT+ +V+ T+E ++ +I+ + +PP QRL
Sbjct: 664 KTVIKQVKDGHTVELLEERIEPRADLPPLLQRL 696
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 26.2 bits (55), Expect = 5.0
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Frame = +1
Query: 16 RHEGSVTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRLIF------ 171
+ E +V +QIFV L + L V +D I +VK K+ + +P +F
Sbjct: 3 QEEDTVNLQIFVPELNVRKF-LAVTQNDFIWDVKRKLLATLPQALPQAFNYGLFLPPCDG 61
Query: 172 -AGKQLEDGRTLSDYNF 219
AGK L + RT+ DY F
Sbjct: 62 RAGKFLLEDRTIRDYPF 78
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 26.2 bits (55), Expect = 5.0
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Frame = +1
Query: 16 RHEGSVTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK--EGIPPDQQRLIF------ 171
+ E +V +QIFV L + L V +D I +VK K+ + +P +F
Sbjct: 3 QEEDTVNLQIFVPELNVRKF-LAVTQNDFIWDVKRKLLATLPQALPQAFNYGLFLPPCDG 61
Query: 172 -AGKQLEDGRTLSDYNF 219
AGK L + RT+ DY F
Sbjct: 62 RAGKFLLEDRTIRDYPF 78
>Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical
protein T02C1.2 protein.
Length = 275
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 76 TLEVEASDTIENVKAKIQDKEGIPPDQQ 159
+L VE D IENV Q +PPD++
Sbjct: 229 SLVVEVIDEIENVPVNTQISPVMPPDEE 256
>U97404-2|AAB93309.1| 795|Caenorhabditis elegans
Acid-sensing/amiloride-sensitiveion channel family
protein 1 protein.
Length = 795
Score = 26.2 bits (55), Expect = 5.0
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -1
Query: 235 GWTLFESCSQTMYGHLPVACRQR*VAVDLGGCPPYLGSSPLHFRSY 98
G + + C+Q +Y A R +A DL GCP LG + H +Y
Sbjct: 652 GCSCKQPCNQDVYSVSYSASRWPAIAGDLSGCP--LGMAAHHCLNY 695
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 26.2 bits (55), Expect = 5.0
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 136 EGIP-PDQQRLIFAGKQLEDGRTLSDYNFQKESTLHLVLRLRGGTIEPSLRIW 291
EG P PD + + G QL DG L + +K + RGG E L I+
Sbjct: 1463 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTIF 1515
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 26.2 bits (55), Expect = 5.0
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 136 EGIP-PDQQRLIFAGKQLEDGRTLSDYNFQKESTLHLVLRLRGGTIEPSLRIW 291
EG P PD + + G QL DG L + +K + RGG E L I+
Sbjct: 1526 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTIF 1578
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 26.2 bits (55), Expect = 5.0
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 136 EGIP-PDQQRLIFAGKQLEDGRTLSDYNFQKESTLHLVLRLRGGTIEPSLRIW 291
EG P PD + + G QL DG L + +K + RGG E L I+
Sbjct: 1526 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTIF 1578
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 26.2 bits (55), Expect = 5.0
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +1
Query: 118 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNFQ 222
AKI++K+ P++ + + K ++G +L +Y F+
Sbjct: 1159 AKIREKQRPEPEEWKKMSTSKVWKNGNSLREYQFE 1193
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 49 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 147
+ TL G+TI V + I + K+ EG+P
Sbjct: 279 ISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMP 311
>Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical
protein K09B11.5b protein.
Length = 525
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -3
Query: 134 LSWIFAFTFSIVSEASTSRVIVFPVRVFTKICIVTLPS 21
L W +A+ + ++ +V+ V++ KIC TL S
Sbjct: 26 LKWDYAYLVRRAMQRNSKKVLCLSVKIDGKICHFTLNS 63
>Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical
protein K09B11.5a protein.
Length = 589
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -3
Query: 134 LSWIFAFTFSIVSEASTSRVIVFPVRVFTKICIVTLPS 21
L W +A+ + ++ +V+ V++ KIC TL S
Sbjct: 90 LKWDYAYLVRRAMQRNSKKVLCLSVKIDGKICHFTLNS 127
>L15347-1|AAA28142.1| 813|Caenorhabditis elegans raf proto-oncogene
protein.
Length = 813
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 22 EGSVTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 150
E S+TM+ L G + + E +T+ ++K I + IPP
Sbjct: 139 ELSLTMEEIASRLPGNELWVHSEYLNTVSSIKHAIVRRTFIPP 181
>AY493414-1|AAR86713.1| 769|Caenorhabditis elegans LIN-45 isoform 3
protein.
Length = 769
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 22 EGSVTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 150
E S+TM+ L G + + E +T+ ++K I + IPP
Sbjct: 95 ELSLTMEEIASRLPGNELWVHSEYLNTVSSIKHAIVRRTFIPP 137
>AY493413-1|AAR86712.1| 813|Caenorhabditis elegans LIN-45 isoform 2
protein.
Length = 813
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 22 EGSVTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 150
E S+TM+ L G + + E +T+ ++K I + IPP
Sbjct: 139 ELSLTMEEIASRLPGNELWVHSEYLNTVSSIKHAIVRRTFIPP 181
>AY455928-1|AAR26307.1| 813|Caenorhabditis elegans LIN-45 protein.
Length = 813
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 22 EGSVTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 150
E S+TM+ L G + + E +T+ ++K I + IPP
Sbjct: 139 ELSLTMEEIASRLPGNELWVHSEYLNTVSSIKHAIVRRTFIPP 181
>AC024204-7|AAM97982.1| 614|Caenorhabditis elegans Abnormal cell
lineage protein 45,isoform b protein.
Length = 614
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 22 EGSVTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 150
E S+TM+ L G + + E +T+ ++K I + IPP
Sbjct: 181 ELSLTMEEIASRLPGNELWVHSEYLNTVSSIKHAIVRRTFIPP 223
>AC024204-6|AAF36042.1| 813|Caenorhabditis elegans Abnormal cell
lineage protein 45,isoform a protein.
Length = 813
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 22 EGSVTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 150
E S+TM+ L G + + E +T+ ++K I + IPP
Sbjct: 139 ELSLTMEEIASRLPGNELWVHSEYLNTVSSIKHAIVRRTFIPP 181
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,007,743
Number of Sequences: 27780
Number of extensions: 164309
Number of successful extensions: 451
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 355337994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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