Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_C08
(316 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 27 0.071
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 0.66
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 2.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 2.0
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 20 6.2
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 20 6.2
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 20 6.2
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 20 6.2
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 20 8.1
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 20 8.1
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 20 8.1
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 26.6 bits (56), Expect = 0.071
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 94 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 204
+DT+ K KI K I PD + L+ KQ E G TL
Sbjct: 732 TDTVLAYKPKILGKPTISPDSRHLVTLDKQ-ETGVTL 767
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.4 bits (48), Expect = 0.66
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = +3
Query: 33 HNADFRKNPNGENYHPRSRGFRYDRKCK 116
+N +++ N N NY+ + Y+ CK
Sbjct: 325 NNNNYKYNYNNNNYNNNNYNNNYNNNCK 352
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 2.0
Identities = 16/67 (23%), Positives = 26/67 (38%)
Frame = +1
Query: 88 EASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNFQKESTLHLVLRLRGGT 267
++ DT E K +Q KEG Q+ F G L + + T+ ++ G
Sbjct: 931 KSQDTTEVTKYILQYKEGDAGIWQQQEFTGPPLPYAALIDELKPATRYTIRVIAEGPAGR 990
Query: 268 IEPSLRI 288
PS +
Sbjct: 991 SVPSAEL 997
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 2.0
Identities = 16/67 (23%), Positives = 26/67 (38%)
Frame = +1
Query: 88 EASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNFQKESTLHLVLRLRGGT 267
++ DT E K +Q KEG Q+ F G L + + T+ ++ G
Sbjct: 927 KSQDTTEVTKYILQYKEGDAGIWQQQEFTGPPLPYAALIDELKPATRYTIRVIAEGPAGR 986
Query: 268 IEPSLRI 288
PS +
Sbjct: 987 SVPSAEL 993
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 6.2
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +3
Query: 33 HNADFRKNPNGENYHPR 83
HN +++ N N NY+ +
Sbjct: 91 HNNNYKYNYNNNNYNKK 107
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 6.2
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +3
Query: 33 HNADFRKNPNGENYHPR 83
HN +++ N N NY+ +
Sbjct: 91 HNNNYKYNYNNNNYNKK 107
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 6.2
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +3
Query: 33 HNADFRKNPNGENYHPR 83
HN +++ N N NY+ +
Sbjct: 91 HNNNYKYNYNNNNYNKK 107
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 6.2
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +3
Query: 33 HNADFRKNPNGENYHPR 83
HN +++ N N NY+ +
Sbjct: 91 HNNNYKYNYNNNNYNKK 107
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 19.8 bits (39), Expect = 8.1
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +3
Query: 33 HNADFRKNPNGENYH 77
HN +++ N N NY+
Sbjct: 90 HNNNYKYNYNNNNYN 104
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 19.8 bits (39), Expect = 8.1
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +3
Query: 33 HNADFRKNPNGENYH 77
HN +++ N N NY+
Sbjct: 90 HNNNYKYNYNNNNYN 104
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 19.8 bits (39), Expect = 8.1
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 148 PDQQRLIFAGKQLEDGRTLSDYNFQ 222
P ++ L Q +G +SDY F+
Sbjct: 352 PSEEDLKRITNQPSEGEDISDYKFR 376
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,479
Number of Sequences: 438
Number of extensions: 1800
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6719922
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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