Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_C05
(346 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98050-1|CAI21070.1| 2717|Homo sapiens human immunodeficiency vi... 28 6.8
X51435-1|CAA35798.1| 2717|Homo sapiens protein ( Human PRDII-BF1... 28 6.8
U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein. 28 6.8
M32019-1|AAA17534.1| 1902|Homo sapiens protein ( Human DNA-bindi... 28 6.8
AL391828-1|CAH73909.1| 2717|Homo sapiens human immunodeficiency ... 28 6.8
AL157373-1|CAH73982.1| 2717|Homo sapiens human immunodeficiency ... 28 6.8
AL137221-1|CAI14768.1| 2717|Homo sapiens human immunodeficiency ... 28 6.8
AY692226-1|AAU04438.1| 2073|Homo sapiens Cdc42-associated guanin... 28 9.0
AL391280-3|CAI41411.1| 2077|Homo sapiens dedicator of cytokinesi... 28 9.0
AL391237-2|CAI41407.1| 2077|Homo sapiens dedicator of cytokinesi... 28 9.0
>Z98050-1|CAI21070.1| 2717|Homo sapiens human immunodeficiency virus
type I enhancer binding protein 1 protein.
Length = 2717
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 147 IWRSTPRISRRRSVNNLICNRQLK--EHGELEQSTEGRLRLHGAAG 278
IW TP+I +RR + ++ + +L+ E G +S+EG L+ A G
Sbjct: 1021 IWEQTPQIRKRRKMKSVGDDEELQQNESGTSPKSSEG-LQFQNALG 1065
>X51435-1|CAA35798.1| 2717|Homo sapiens protein ( Human PRDII-BF1 gene
for a DNA-binding protein. ).
Length = 2717
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 147 IWRSTPRISRRRSVNNLICNRQLK--EHGELEQSTEGRLRLHGAAG 278
IW TP+I +RR + ++ + +L+ E G +S+EG L+ A G
Sbjct: 1020 IWEQTPQIRKRRKMKSVGDDEELQQNESGTSPKSSEG-LQFQNALG 1064
>U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.
Length = 4861
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +3
Query: 147 IWRSTPRISRRRSVNNLICNRQLKEHGELEQSTEGRLRLHGAAGLRVIQQSTGCVD 314
I S ++ + RSV + N +++E E ++ +G+ HG A L +Q T C++
Sbjct: 2248 IKESGQKLKKSRSVQSREEN-EMREEKESKEEEKGKHTRHGLADLSELQLRTLCIE 2302
>M32019-1|AAA17534.1| 1902|Homo sapiens protein ( Human DNA-binding
protein (mbp-1) mRNA, complete cds. ).
Length = 1902
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 147 IWRSTPRISRRRSVNNLICNRQLK--EHGELEQSTEGRLRLHGAAG 278
IW TP+I +RR + ++ + +L+ E G +S+EG L+ A G
Sbjct: 205 IWEQTPQIRKRRKMKSVGDDEELQQNESGTSPKSSEG-LQFQNALG 249
>AL391828-1|CAH73909.1| 2717|Homo sapiens human immunodeficiency virus
type I enhancer binding protein 1 protein.
Length = 2717
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 147 IWRSTPRISRRRSVNNLICNRQLK--EHGELEQSTEGRLRLHGAAG 278
IW TP+I +RR + ++ + +L+ E G +S+EG L+ A G
Sbjct: 1021 IWEQTPQIRKRRKMKSVGDDEELQQNESGTSPKSSEG-LQFQNALG 1065
>AL157373-1|CAH73982.1| 2717|Homo sapiens human immunodeficiency virus
type I enhancer binding protein 1 protein.
Length = 2717
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 147 IWRSTPRISRRRSVNNLICNRQLK--EHGELEQSTEGRLRLHGAAG 278
IW TP+I +RR + ++ + +L+ E G +S+EG L+ A G
Sbjct: 1021 IWEQTPQIRKRRKMKSVGDDEELQQNESGTSPKSSEG-LQFQNALG 1065
>AL137221-1|CAI14768.1| 2717|Homo sapiens human immunodeficiency virus
type I enhancer binding protein 1 protein.
Length = 2717
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 147 IWRSTPRISRRRSVNNLICNRQLK--EHGELEQSTEGRLRLHGAAG 278
IW TP+I +RR + ++ + +L+ E G +S+EG L+ A G
Sbjct: 1021 IWEQTPQIRKRRKMKSVGDDEELQQNESGTSPKSSEG-LQFQNALG 1065
>AY692226-1|AAU04438.1| 2073|Homo sapiens Cdc42-associated guanine
nucleotide exchange factor ACG/DOCK11 protein.
Length = 2073
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 229 SLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVL 345
+L K ++ +DS+VQ+ E + Q T + GKA+ ++
Sbjct: 266 TLKKIIQINTDSLVQEKKETVETAQDDETSSQGKAENIM 304
>AL391280-3|CAI41411.1| 2077|Homo sapiens dedicator of cytokinesis
11 protein.
Length = 2077
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 229 SLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVL 345
+L K ++ +DS+VQ+ E + Q T + GKA+ ++
Sbjct: 266 TLKKIIQINTDSLVQEKKETVETAQDDETSSQGKAENIM 304
>AL391237-2|CAI41407.1| 2077|Homo sapiens dedicator of cytokinesis
11 protein.
Length = 2077
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 229 SLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVL 345
+L K ++ +DS+VQ+ E + Q T + GKA+ ++
Sbjct: 266 TLKKIIQINTDSLVQEKKETVETAQDDETSSQGKAENIM 304
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,722,738
Number of Sequences: 237096
Number of extensions: 637645
Number of successful extensions: 1787
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1787
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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