Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_C04
(322 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 128 9e-31
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 128 9e-31
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 128 9e-31
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 107 1e-24
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 89 9e-19
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 89 9e-19
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 75 2e-14
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 61 2e-10
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 61 2e-10
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 60 3e-10
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 60 3e-10
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 60 3e-10
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 44 2e-05
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.002
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 34 0.020
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 34 0.026
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 31 0.18
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 31 0.24
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.24
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 30 0.43
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 30 0.43
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 0.43
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 29 0.56
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 29 0.99
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 29 0.99
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr... 29 0.99
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li... 29 0.99
AC006708-12|AAT81173.1| 908|Caenorhabditis elegans Hypothetical... 29 0.99
AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical... 29 0.99
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 1.7
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 28 1.7
Z81045-2|CAB02814.2| 298|Caenorhabditis elegans Hypothetical pr... 28 1.7
Z81044-8|CAI79147.2| 165|Caenorhabditis elegans Hypothetical pr... 28 1.7
U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical pr... 28 1.7
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 28 1.7
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 28 1.7
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 27 2.3
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 3.0
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 3.0
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 3.0
Z72511-4|CAA96660.1| 395|Caenorhabditis elegans Hypothetical pr... 27 4.0
AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical ... 27 4.0
U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical pr... 26 5.3
J05274-1|AAA27984.1| 360|Caenorhabditis elegans protein ( C.ele... 26 5.3
AF067211-13|AAC16993.1| 360|Caenorhabditis elegans Protein kina... 26 5.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z99276-2|CAB16482.1| 388|Caenorhabditis elegans Hypothetical pr... 26 7.0
AL023843-2|CAA19523.1| 388|Caenorhabditis elegans Hypothetical ... 26 7.0
AC024807-3|AAK84614.1| 252|Caenorhabditis elegans Hypothetical ... 26 7.0
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 25 9.2
Z81104-1|CAB70255.1| 329|Caenorhabditis elegans Hypothetical pr... 25 9.2
AF025469-3|AAG00031.2| 271|Caenorhabditis elegans Hypothetical ... 25 9.2
AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily a... 25 9.2
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 128 bits (309), Expect = 9e-31
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +3
Query: 9 RERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 188
RERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAG
Sbjct: 67 RERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAG 126
Query: 189 IS 194
IS
Sbjct: 127 IS 128
Score = 27.5 bits (58), Expect = 2.3
Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Frame = +1
Query: 202 GQTREHALLAFT-----LVGLATDCRSKQNGLH*ATIQ 300
GQTREHALLA T LV L + RS + TIQ
Sbjct: 131 GQTREHALLAQTLGVKQLVSLRSPTRSPDSSRRSDTIQ 168
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 128 bits (309), Expect = 9e-31
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +3
Query: 9 RERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 188
RERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAG
Sbjct: 67 RERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAG 126
Query: 189 IS 194
IS
Sbjct: 127 IS 128
Score = 43.2 bits (97), Expect = 4e-05
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +2
Query: 245 VSQLIVGVSKMDSTEPPYSESRFEEI 322
V QLIV +KMDSTEPP+SE+RF EI
Sbjct: 145 VKQLIVACNKMDSTEPPFSEARFTEI 170
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 202 GQTREHALLAFTL 240
GQTREHALLA TL
Sbjct: 131 GQTREHALLAQTL 143
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 128 bits (309), Expect = 9e-31
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +3
Query: 9 RERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 188
RERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAG
Sbjct: 67 RERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAG 126
Query: 189 IS 194
IS
Sbjct: 127 IS 128
Score = 43.2 bits (97), Expect = 4e-05
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +2
Query: 245 VSQLIVGVSKMDSTEPPYSESRFEEI 322
V QLIV +KMDSTEPP+SE+RF EI
Sbjct: 145 VKQLIVACNKMDSTEPPFSEARFTEI 170
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 202 GQTREHALLAFTL 240
GQTREHALLA TL
Sbjct: 131 GQTREHALLAQTL 143
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 107 bits (258), Expect = 1e-24
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +3
Query: 9 RERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 161
RERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 67 RERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 42.3 bits (95), Expect = 7e-05
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +2
Query: 215 NTLCSLSHSSVSQLIVGVSKMDSTEPPYSESRFEEI 322
N + S + + L+V +KMDSTEPP+SE+RF EI
Sbjct: 101 NMITGTSQADCAVLVVACNKMDSTEPPFSEARFTEI 136
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 88.6 bits (210), Expect = 9e-19
Identities = 39/63 (61%), Positives = 47/63 (74%)
Frame = +3
Query: 9 RERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 188
RERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 230 RERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETG 289
Query: 189 ISN 197
N
Sbjct: 290 FEN 292
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +2
Query: 245 VSQLIVGVSKMDSTEPPYSESRFEEI 322
V+QLIV V+K+D+ + +S+ RF+EI
Sbjct: 308 VTQLIVAVNKLDTVD--WSQDRFDEI 331
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 88.6 bits (210), Expect = 9e-19
Identities = 39/63 (61%), Positives = 47/63 (74%)
Frame = +3
Query: 9 RERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 188
RERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 248 RERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETG 307
Query: 189 ISN 197
N
Sbjct: 308 FEN 310
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +2
Query: 245 VSQLIVGVSKMDSTEPPYSESRFEEI 322
V+QLIV V+K+D+ + +S+ RF+EI
Sbjct: 326 VTQLIVAVNKLDTVD--WSQDRFDEI 349
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 74.5 bits (175), Expect = 2e-14
Identities = 32/60 (53%), Positives = 44/60 (73%)
Frame = +3
Query: 9 RERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 188
RE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G
Sbjct: 169 REKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETG 228
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 239 SSVSQLIVGVSKMDSTEPPYSESRFEEI 322
+ V L++ V+KMD + E RF+EI
Sbjct: 245 AGVKHLVILVNKMDDPTVKWEEERFKEI 272
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 60.9 bits (141), Expect = 2e-10
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +3
Query: 9 RERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 182
++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 90 KKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME 147
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 60.9 bits (141), Expect = 2e-10
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +3
Query: 9 RERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 182
++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 90 KKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME 147
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 60.5 bits (140), Expect = 3e-10
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +3
Query: 9 RERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 94 KARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDG 148
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 60.5 bits (140), Expect = 3e-10
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +3
Query: 9 RERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 95 KARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDG 149
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 60.5 bits (140), Expect = 3e-10
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +3
Query: 9 RERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 95 KARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDG 149
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 44.4 bits (100), Expect = 2e-05
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +3
Query: 9 RERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 188
RERGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 84 RERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQGVQAQT 143
Query: 189 ISNIW 203
I+N W
Sbjct: 144 IANFW 148
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 37.5 bits (83), Expect = 0.002
Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 6 GRERGITIDIALWKFETGK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 182
G GIT I + E K VT +D PGH F G AD VL+VAA G E
Sbjct: 184 GEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE 243
Query: 183 AGISNI 200
+I
Sbjct: 244 QTAQSI 249
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 34.3 bits (75), Expect = 0.020
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +3
Query: 9 RERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
R+RGITI A + + IID PGH DF + D AVL++ G G
Sbjct: 94 RQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 33.9 bits (74), Expect = 0.026
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 9 RERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
RERGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 72 RERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 31.1 bits (67), Expect = 0.18
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +3
Query: 3 RGRERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
+G + T+++ K + + + +ID+PGH DF + D A+++V +G
Sbjct: 90 KGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +3
Query: 3 RGRERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
+G + T+++ K + + + +ID+PGH DF + D A+++V +G
Sbjct: 90 KGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.24
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 66 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 161
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 29.9 bits (64), Expect = 0.43
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 63 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
Y + IID PGH +F M AD V++V A G
Sbjct: 201 YLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 29.9 bits (64), Expect = 0.43
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 63 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
Y + IID PGH +F M AD V++V A G
Sbjct: 76 YLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 0.43
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 75 IIDAPGHRDFIKNMITGTSQADCAVLIV 158
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 29.5 bits (63), Expect = 0.56
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 42 WKFETGKYY-VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAAGTGEFEAGISNI 200
++ E G+ V IID+ G RDFI KN+ GT+ A V+ A E +S +
Sbjct: 63 YEIEEGRVLMVQIIDSSGSRDFIGMKNLYIGTADA-FLVVFAADDASSLEEALSTL 117
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 28.7 bits (61), Expect = 0.99
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 15 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 158
RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 67 RGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 28.7 bits (61), Expect = 0.99
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 15 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 158
RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 67 RGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical
protein F31D5.5 protein.
Length = 1788
Score = 28.7 bits (61), Expect = 0.99
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2
Query: 321 ISSNRDSLYGGSVESILLTPTISCETDECESEQSV 217
IS GGS + ++L+ +SCE + CE ++
Sbjct: 241 ISLKEGKTKGGSTKDVILSAHLSCEGESCEFTSTI 275
>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
protein MTH-1 protein.
Length = 1757
Score = 28.7 bits (61), Expect = 0.99
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2
Query: 321 ISSNRDSLYGGSVESILLTPTISCETDECESEQSV 217
IS GGS + ++L+ +SCE + CE ++
Sbjct: 210 ISLKEGKTKGGSTKDVILSAHLSCEGESCEFTSTI 244
>AC006708-12|AAT81173.1| 908|Caenorhabditis elegans Hypothetical
protein Y110A7A.9b protein.
Length = 908
Score = 28.7 bits (61), Expect = 0.99
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = +1
Query: 37 LSGSSKPANTMSPSSTLLDTEISSRT*SLE----RLKLTAP-CLLSPLVLVNSKPVSQIF 201
L+G A S TL DTE +R S+ +L L A C LSPLVL N + +
Sbjct: 539 LAGDHTMAVLHSKEVTLWDTEAMTRIQSIRMDSSKLCLDADLCGLSPLVLSNDNTLRFVV 598
Query: 202 GQTREHALL 228
T+ +L
Sbjct: 599 SNTKNQPIL 607
>AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical
protein Y110A7A.9a protein.
Length = 1019
Score = 28.7 bits (61), Expect = 0.99
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = +1
Query: 37 LSGSSKPANTMSPSSTLLDTEISSRT*SLE----RLKLTAP-CLLSPLVLVNSKPVSQIF 201
L+G A S TL DTE +R S+ +L L A C LSPLVL N + +
Sbjct: 650 LAGDHTMAVLHSKEVTLWDTEAMTRIQSIRMDSSKLCLDADLCGLSPLVLSNDNTLRFVV 709
Query: 202 GQTREHALL 228
T+ +L
Sbjct: 710 SNTKNQPIL 718
>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical protein
F14F4.3b protein.
Length = 1427
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 158 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 27
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1396
>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical protein
F14F4.3a protein.
Length = 1400
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 158 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 27
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1369
>Z81045-2|CAB02814.2| 298|Caenorhabditis elegans Hypothetical
protein C36F7.2 protein.
Length = 298
Score = 27.9 bits (59), Expect = 1.7
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +1
Query: 16 VVSPSILLSGSSKPANTMSPSSTLLDTEIS 105
V SPS + SSK TM PSST D+ IS
Sbjct: 236 VGSPSSISMKSSKSTRTMRPSSTPNDSMIS 265
>Z81044-8|CAI79147.2| 165|Caenorhabditis elegans Hypothetical
protein C30H6.12 protein.
Length = 165
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 19 VSPSILLSGSSKPANTMSPSSTLLDTEISSRT*SLERLK 135
V I++ G+ KP T +PSST+ +S R S E+ K
Sbjct: 23 VPMEIIIGGNGKPIFTATPSSTVGSPVLSDRRSSEEKEK 61
>U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical
protein T19D7.1 protein.
Length = 497
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -1
Query: 316 LKSRLTVWWLSGVHFAYSYNQLRDRRV 236
+KS L ++WL V+F +SYN R +
Sbjct: 250 IKSLLHIFWLPHVYFPFSYNLEESRNL 276
>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 158 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 27
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1396
>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 158 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 27
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1369
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 27.5 bits (58), Expect = 2.3
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 69 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
+ +ID PGH I+ ++ ++ D A++I+ G
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAG 108
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 89 RSVDDGDIVFAGFELPESNIDGDTTLT 9
R ++DGDIV + F+ P I D T++
Sbjct: 260 RFIEDGDIVSSFFDRPSIRIQSDNTVS 286
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -2
Query: 267 TPTISCETDECESEQSV-FTRLSKYLRY 187
T TI+CE +ECE ++S+ + R K +R+
Sbjct: 3121 TATIACELEECELKRSIRWLRDGKDIRF 3148
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -2
Query: 267 TPTISCETDECESEQSV-FTRLSKYLRY 187
T TI+CE +ECE ++S+ + R K +R+
Sbjct: 3121 TATIACELEECELKRSIRWLRDGKDIRF 3148
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -2
Query: 267 TPTISCETDECESEQSV-FTRLSKYLRY 187
T TI+CE +ECE ++S+ + R K +R+
Sbjct: 3121 TATIACELEECELKRSIRWLRDGKDIRF 3148
>Z72511-4|CAA96660.1| 395|Caenorhabditis elegans Hypothetical
protein F55A11.7 protein.
Length = 395
Score = 26.6 bits (56), Expect = 4.0
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -3
Query: 290 AQWSPFCLLLQSVARPTSVKASRACSRVCPNI*DTGFEFTSTSGDNK 150
A S FCLL Q+ RPTS + C CP + F T+ + DN+
Sbjct: 67 ADASIFCLLCQNKIRPTSPNFVKPCQ--CPLV----FVHTTCAIDNE 107
>AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical
protein Y73C8B.3 protein.
Length = 308
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 185 GFEFTSTSGDNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAG 54
GF FT+ D KH + + S+ +LDE+ + DG + + G
Sbjct: 74 GFTFTNEYPDQKHINIERQNYSNALLDELGI-----DGKMAYIG 112
>U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical
protein T20F5.5 protein.
Length = 226
Score = 26.2 bits (55), Expect = 5.3
Identities = 22/86 (25%), Positives = 37/86 (43%)
Frame = +1
Query: 13 SVVSPSILLSGSSKPANTMSPSSTLLDTEISSRT*SLERLKLTAPCLLSPLVLVNSKPVS 192
S P + L SS T S + + + +L +P ++P VLV K +
Sbjct: 95 STKKPPVTLVESSADVTTAVESISSQQQLAPAAPVAPPQLTQASPAPVAPAVLVPEKEKT 154
Query: 193 QIFGQTREHALLAFTLVGLATDCRSK 270
Q+ + ++ +FT+ AT RSK
Sbjct: 155 ADKSQSNDSSMTSFTVPEEATFNRSK 180
>J05274-1|AAA27984.1| 360|Caenorhabditis elegans protein (
C.elegans casein kinaseII-alpha gene, complete cds. ).
Length = 360
Score = 26.2 bits (55), Expect = 5.3
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 20 YHHRY-CSLEVRNRQILCHHHRRSWTQRFHQEHDH 121
Y RY L+ R IL H R+ W + H E+ H
Sbjct: 256 YIARYHIDLDPRFNDILGRHSRKRWERFIHAENQH 290
>AF067211-13|AAC16993.1| 360|Caenorhabditis elegans Protein kinase
protein 3 protein.
Length = 360
Score = 26.2 bits (55), Expect = 5.3
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 20 YHHRY-CSLEVRNRQILCHHHRRSWTQRFHQEHDH 121
Y RY L+ R IL H R+ W + H E+ H
Sbjct: 256 YIARYHIDLDPRFNDILGRHSRKRWERFIHAENQH 290
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 25.8 bits (54), Expect = 7.0
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 69 VTIIDAPGHRDFIKNMITGTSQADCAVLI 155
+ +ID PGH I+ ++ ++ D A++I
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVI 102
>Z99276-2|CAB16482.1| 388|Caenorhabditis elegans Hypothetical
protein Y52D3.1a protein.
Length = 388
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -3
Query: 203 PNI*DTGFEFTSTSGDNKHGAVSLRRSSDHVLDEISVSR-SVDDGDIVFAGFELPESNI 30
PN+ +TG++ G G + L R + D +++ + ++DD D +A SN+
Sbjct: 45 PNLKETGYDCVRYMGTCNGGQIYLGRERKKLKDYVAIKKFAIDDVD-DYAAIAKESSNL 102
>AL023843-2|CAA19523.1| 388|Caenorhabditis elegans Hypothetical
protein Y52D3.1a protein.
Length = 388
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -3
Query: 203 PNI*DTGFEFTSTSGDNKHGAVSLRRSSDHVLDEISVSR-SVDDGDIVFAGFELPESNI 30
PN+ +TG++ G G + L R + D +++ + ++DD D +A SN+
Sbjct: 45 PNLKETGYDCVRYMGTCNGGQIYLGRERKKLKDYVAIKKFAIDDVD-DYAAIAKESSNL 102
>AC024807-3|AAK84614.1| 252|Caenorhabditis elegans Hypothetical
protein Y53G8AL.3 protein.
Length = 252
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 193 EIPASNSPVPAATISTAQSA*DVPVIMFLMKSLC 92
E+PA+ +PV +S+A + +V +I+F C
Sbjct: 39 EVPATTTPVSLEFVSSAHTTQNVLLIIFAASKEC 72
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 80 DDGDIVFAGFELPESNIDGDTTLTPS 3
D+ ++VF G +L +S I D +LTP+
Sbjct: 46 DELEVVFCGKKLSKSTIMRDLSLTPA 71
>Z81104-1|CAB70255.1| 329|Caenorhabditis elegans Hypothetical
protein M199.1 protein.
Length = 329
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -3
Query: 299 CMVAQWSPFCLLLQSVARPTSVKASRACSRVC 204
CMV ++ + L++ +AR S KASRA C
Sbjct: 213 CMVVLFTLYYALVKKLARGQSSKASRAIFIQC 244
>AF025469-3|AAG00031.2| 271|Caenorhabditis elegans Hypothetical
protein W09B6.4 protein.
Length = 271
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 38 SLEVRNRQILCHHHRRSWTQRFHQEHDHWN 127
+L+ + I+CH +W + FH E WN
Sbjct: 30 ALQTDKKSIICHSAFATWYKEFHVE---WN 56
>AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily
assigned gene nameprotein 305 protein.
Length = 869
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 56 GFELPESNIDGDTTLTPS 3
G ELPE+++DG T +T S
Sbjct: 553 GKELPEASVDGTTHMTSS 570
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,649,084
Number of Sequences: 27780
Number of extensions: 140962
Number of successful extensions: 592
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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