Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_C03
(202 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC063302-1|AAH63302.1| 1278|Homo sapiens Niemann-Pick disease, t... 78 6e-15
AF338230-1|AAK25791.1| 1278|Homo sapiens Niemann-Pick disease C1... 78 6e-15
AF157379-1|AAD48006.1| 1278|Homo sapiens Niemann-Pick C1 protein... 78 6e-15
AF123046-1|AAF28875.1| 190|Homo sapiens Niemann-Pick C1 disease... 78 6e-15
AF002020-1|AAB63982.1| 1278|Homo sapiens Niemann-Pick C disease ... 78 6e-15
AB209048-1|BAD92285.1| 1289|Homo sapiens Niemann-Pick disease, t... 78 6e-15
BC117178-1|AAI17179.1| 1332|Homo sapiens NPC1L1 protein protein. 64 8e-11
AY515256-1|AAS56939.1| 1332|Homo sapiens NPC1L1 splice variant p... 64 8e-11
AY437865-1|AAR97886.1| 1332|Homo sapiens Niemann-Pick C1-like 1 ... 64 8e-11
AF192522-1|AAF20396.1| 1359|Homo sapiens Niemann-Pick C1-like pr... 64 8e-11
U43148-1|AAC50496.1| 1296|Homo sapiens PTC protein. 37 0.010
U59464-1|AAC50550.1| 1447|Homo sapiens PATCHED protein. 37 0.014
AL161729-2|CAH73818.1| 1296|Homo sapiens patched homolog 1 (Dros... 37 0.014
AL161729-1|CAH73817.1| 1447|Homo sapiens patched homolog 1 (Dros... 37 0.014
AB209495-1|BAD92732.1| 586|Homo sapiens patched variant protein. 37 0.014
AY438664-1|AAR05447.1| 1203|Homo sapiens patched homolog 2 (Dros... 34 0.073
AY359016-1|AAQ89375.1| 1203|Homo sapiens Patched 2 protein. 34 0.073
AY358555-1|AAQ88919.1| 1211|Homo sapiens Patched 2 protein. 34 0.073
AL592166-5|CAI13000.1| 1203|Homo sapiens patched homolog 2 (Dros... 34 0.073
AL136380-1|CAI23127.1| 1203|Homo sapiens patched homolog 2 (Dros... 34 0.073
AF119569-1|AAD17260.1| 1146|Homo sapiens patched 2 protein. 34 0.073
AF091501-1|AAC79847.1| 1203|Homo sapiens receptor protein patche... 34 0.073
AF087651-1|AAD25953.1| 1203|Homo sapiens patched 2 protein. 34 0.073
BC094882-1|AAH94882.1| 739|Homo sapiens DKFZp547E087 protein pr... 32 0.39
AL590989-2|CAH70606.1| 1438|Homo sapiens patched domain containi... 31 0.90
AL031735-1|CAI22474.1| 1438|Homo sapiens patched domain containi... 31 0.90
AB037758-1|BAA92575.1| 1438|Homo sapiens KIAA1337 protein protein. 31 0.90
BC090953-1|AAH90953.1| 630|Homo sapiens tripartite motif-contai... 30 1.2
BC071887-1|AAH71887.1| 361|Homo sapiens TRIM41 protein protein. 30 1.2
BC018765-1|AAH18765.2| 552|Homo sapiens TRIM41 protein protein. 30 1.2
BC004956-1|AAH04956.1| 361|Homo sapiens Unknown (protein for IM... 30 1.2
AK074052-1|BAB84878.1| 255|Homo sapiens FLJ00123 protein protein. 30 1.2
AB100367-1|BAD07473.1| 518|Homo sapiens hypothetical protein pr... 30 1.2
AB100366-1|BAD07472.1| 630|Homo sapiens hypothetical protein pr... 30 1.2
AB063180-1|BAB70617.1| 439|Homo sapiens hypothetical protein pr... 30 1.2
DQ009660-1|AAY26234.1| 1836|Homo sapiens expressed in synovial l... 30 1.6
BC146783-1|AAI46784.1| 1773|Homo sapiens FNDC1 protein protein. 30 1.6
AB058769-1|BAB47495.2| 1783|Homo sapiens KIAA1866 protein protein. 30 1.6
Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine r... 29 2.8
X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine re... 29 2.8
X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine r... 29 2.8
U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine r... 29 2.8
L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine r... 29 2.8
DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor, n... 29 2.8
BC096293-1|AAH96293.1| 451|Homo sapiens CHRNA4 protein protein. 29 2.8
BC096292-1|AAH96292.1| 451|Homo sapiens CHRNA4 protein protein. 29 2.8
BC096291-1|AAH96291.1| 556|Homo sapiens CHRNA4 protein protein. 29 2.8
BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor, n... 29 2.8
BC092474-1|AAH92474.1| 304|Homo sapiens PRR16 protein protein. 29 2.8
BC038838-1|AAH38838.1| 234|Homo sapiens PRR16 protein protein. 29 2.8
AF242769-1|AAF65446.1| 281|Homo sapiens mesenchymal stem cell p... 29 2.8
AB209359-1|BAD92596.1| 533|Homo sapiens cholinergic receptor, n... 29 2.8
AK126894-1|BAC86739.1| 297|Homo sapiens protein ( Homo sapiens ... 28 4.8
DQ847274-1|ABH10140.1| 914|Homo sapiens epithelial cell transfo... 28 6.4
BC112086-1|AAI12087.1| 883|Homo sapiens epithelial cell transfo... 28 6.4
BC000263-1|AAH00263.1| 798|Homo sapiens ubiquitin specific pept... 28 6.4
AY376439-1|AAQ83675.1| 882|Homo sapiens epithelial cell transfo... 28 6.4
AK023267-1|BAB14498.1| 798|Homo sapiens protein ( Homo sapiens ... 28 6.4
X63753-1|CAA45282.1| 1523|Homo sapiens son-a protein. 27 8.4
BC141881-1|AAI41882.1| 1537|Homo sapiens WNK1 protein protein. 27 8.4
BC105992-1|AAI05993.1| 275|Homo sapiens SYNGR2 protein protein. 27 8.4
BC064947-1|AAH64947.1| 735|Homo sapiens SMPD4 protein protein. 27 8.4
BC027971-1|AAH27971.1| 911|Homo sapiens brevican protein. 27 8.4
BC022938-1|AAH22938.1| 911|Homo sapiens brevican protein. 27 8.4
BC010571-1|AAH10571.1| 911|Homo sapiens brevican protein. 27 8.4
BC009117-1|AAH09117.1| 911|Homo sapiens brevican protein. 27 8.4
BC002422-1|AAH02422.1| 1365|Homo sapiens SON protein protein. 27 8.4
AY358372-1|AAQ88738.1| 911|Homo sapiens Brevican Core Pro protein. 27 8.4
AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein. 27 8.4
AY007241-1|AAG01897.1| 516|Homo sapiens hyaluronan binding prot... 27 8.4
AL590666-18|CAI16352.1| 911|Homo sapiens brevican protein. 27 8.4
AL445198-5|CAI13083.1| 532|Homo sapiens nuclear factor I/A prot... 27 8.4
AL445198-4|CAI13079.1| 466|Homo sapiens nuclear factor I/A prot... 27 8.4
AL445198-3|CAI13081.1| 509|Homo sapiens nuclear factor I/A prot... 27 8.4
AL445198-2|CAI13082.1| 487|Homo sapiens nuclear factor I/A prot... 27 8.4
AL365181-16|CAI13060.1| 671|Homo sapiens brevican protein. 27 8.4
AL365181-12|CAI13056.1| 911|Homo sapiens brevican protein. 27 8.4
AL096888-6|CAI23242.1| 532|Homo sapiens nuclear factor I/A prot... 27 8.4
AL096888-5|CAI23239.1| 466|Homo sapiens nuclear factor I/A prot... 27 8.4
AL096888-4|CAI23240.1| 509|Homo sapiens nuclear factor I/A prot... 27 8.4
AL096888-3|CAI23237.1| 487|Homo sapiens nuclear factor I/A prot... 27 8.4
AL096888-2|CAI23238.1| 380|Homo sapiens nuclear factor I/A prot... 27 8.4
AK000304-1|BAA91070.1| 798|Homo sapiens protein ( Homo sapiens ... 27 8.4
AJ296290-1|CAC15059.1| 2382|Homo sapiens putative protein kinase... 27 8.4
AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein... 27 8.4
AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein... 27 8.4
AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein... 27 8.4
AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein... 27 8.4
AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein... 27 8.4
AF229053-1|AAG23135.1| 671|Homo sapiens chondroitin sulfate pro... 27 8.4
AF228710-1|AAG23134.1| 911|Homo sapiens chondroitin sulfate pro... 27 8.4
AC018804-2|AAY14883.1| 798|Homo sapiens unknown protein. 27 8.4
AB209570-1|BAD92807.1| 850|Homo sapiens brevican isoform 1 vari... 27 8.4
AB037860-1|BAA92677.1| 561|Homo sapiens KIAA1439 protein protein. 27 8.4
AB037839-1|BAA92656.1| 889|Homo sapiens KIAA1418 protein protein. 27 8.4
AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein. 27 8.4
AB002342-1|BAA20802.2| 2066|Homo sapiens KIAA0344 protein. 27 8.4
>BC063302-1|AAH63302.1| 1278|Homo sapiens Niemann-Pick disease, type
C1 protein.
Length = 1278
Score = 77.8 bits (183), Expect = 6e-15
Identities = 38/60 (63%), Positives = 44/60 (73%)
Frame = +3
Query: 21 GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSVLSGITLT 200
GISLNAVSLVNLVM+ GI+VEFCSH+ +F +RA EAL MG+SV SGITLT
Sbjct: 1146 GISLNAVSLVNLVMSCGISVEFCSHITRAFTVSMKGSRVERAEEALAHMGSSVFSGITLT 1205
>AF338230-1|AAK25791.1| 1278|Homo sapiens Niemann-Pick disease C1
protein protein.
Length = 1278
Score = 77.8 bits (183), Expect = 6e-15
Identities = 38/60 (63%), Positives = 44/60 (73%)
Frame = +3
Query: 21 GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSVLSGITLT 200
GISLNAVSLVNLVM+ GI+VEFCSH+ +F +RA EAL MG+SV SGITLT
Sbjct: 1146 GISLNAVSLVNLVMSCGISVEFCSHITRAFTVSMKGSRVERAEEALAHMGSSVFSGITLT 1205
>AF157379-1|AAD48006.1| 1278|Homo sapiens Niemann-Pick C1 protein
protein.
Length = 1278
Score = 77.8 bits (183), Expect = 6e-15
Identities = 38/60 (63%), Positives = 44/60 (73%)
Frame = +3
Query: 21 GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSVLSGITLT 200
GISLNAVSLVNLVM+ GI+VEFCSH+ +F +RA EAL MG+SV SGITLT
Sbjct: 1146 GISLNAVSLVNLVMSCGISVEFCSHITRAFTVSMKGSRVERAEEALAHMGSSVFSGITLT 1205
>AF123046-1|AAF28875.1| 190|Homo sapiens Niemann-Pick C1 disease
protein protein.
Length = 190
Score = 77.8 bits (183), Expect = 6e-15
Identities = 38/60 (63%), Positives = 44/60 (73%)
Frame = +3
Query: 21 GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSVLSGITLT 200
GISLNAVSLVNLVM+ GI+VEFCSH+ +F +RA EAL MG+SV SGITLT
Sbjct: 105 GISLNAVSLVNLVMSCGISVEFCSHITRAFTVSMKGSRVERAEEALAHMGSSVFSGITLT 164
>AF002020-1|AAB63982.1| 1278|Homo sapiens Niemann-Pick C disease
protein protein.
Length = 1278
Score = 77.8 bits (183), Expect = 6e-15
Identities = 38/60 (63%), Positives = 44/60 (73%)
Frame = +3
Query: 21 GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSVLSGITLT 200
GISLNAVSLVNLVM+ GI+VEFCSH+ +F +RA EAL MG+SV SGITLT
Sbjct: 1146 GISLNAVSLVNLVMSCGISVEFCSHITRAFTVSMKGSRVERAEEALAHMGSSVFSGITLT 1205
>AB209048-1|BAD92285.1| 1289|Homo sapiens Niemann-Pick disease, type
C1 variant protein.
Length = 1289
Score = 77.8 bits (183), Expect = 6e-15
Identities = 38/60 (63%), Positives = 44/60 (73%)
Frame = +3
Query: 21 GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSVLSGITLT 200
GISLNAVSLVNLVM+ GI+VEFCSH+ +F +RA EAL MG+SV SGITLT
Sbjct: 1157 GISLNAVSLVNLVMSCGISVEFCSHITRAFTVSMKGSRVERAEEALAHMGSSVFSGITLT 1216
>BC117178-1|AAI17179.1| 1332|Homo sapiens NPC1L1 protein protein.
Length = 1332
Score = 64.1 bits (149), Expect = 8e-11
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +3
Query: 21 GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSVLSGITLT 200
GIS NAVSL+NLV AVG++VEF SH+ SF +RA EA MG++V +G+ +T
Sbjct: 1160 GISYNAVSLINLVSAVGMSVEFVSHITRSFAISTKPTWLERAKEATISMGSAVFAGVAMT 1219
>AY515256-1|AAS56939.1| 1332|Homo sapiens NPC1L1 splice variant
protein.
Length = 1332
Score = 64.1 bits (149), Expect = 8e-11
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +3
Query: 21 GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSVLSGITLT 200
GIS NAVSL+NLV AVG++VEF SH+ SF +RA EA MG++V +G+ +T
Sbjct: 1160 GISYNAVSLINLVSAVGMSVEFVSHITRSFAISTKPTWLERAKEATISMGSAVFAGVAMT 1219
>AY437865-1|AAR97886.1| 1332|Homo sapiens Niemann-Pick C1-like 1
protein.
Length = 1332
Score = 64.1 bits (149), Expect = 8e-11
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +3
Query: 21 GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSVLSGITLT 200
GIS NAVSL+NLV AVG++VEF SH+ SF +RA EA MG++V +G+ +T
Sbjct: 1160 GISYNAVSLINLVSAVGMSVEFVSHITRSFAISTKPTWLERAKEATISMGSAVFAGVAMT 1219
>AF192522-1|AAF20396.1| 1359|Homo sapiens Niemann-Pick C1-like protein
1 protein.
Length = 1359
Score = 64.1 bits (149), Expect = 8e-11
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +3
Query: 21 GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSVLSGITLT 200
GIS NAVSL+NLV AVG++VEF SH+ SF +RA EA MG++V +G+ +T
Sbjct: 1187 GISYNAVSLINLVSAVGMSVEFVSHITRSFAISTKPTWLERAKEATISMGSAVFAGVAMT 1246
>U43148-1|AAC50496.1| 1296|Homo sapiens PTC protein.
Length = 1296
Score = 37.1 bits (82), Expect = 0.010
Identities = 27/67 (40%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 6 FGTSG--GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSV 179
FG G GI L+AV +V L+ +VGI VEF H+ +F RA AL M V
Sbjct: 917 FGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVALAFLTAISDKNR-RAVLALEHMFAPV 975
Query: 180 LSGITLT 200
L G T
Sbjct: 976 LDGAVST 982
>U59464-1|AAC50550.1| 1447|Homo sapiens PATCHED protein.
Length = 1447
Score = 36.7 bits (81), Expect = 0.014
Identities = 27/67 (40%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 6 FGTSG--GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSV 179
FG G GI L+AV +V L+ +VGI VEF H+ +F RA AL M V
Sbjct: 1068 FGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVALAFLTAIGDKNR-RAVLALEHMFAPV 1126
Query: 180 LSGITLT 200
L G T
Sbjct: 1127 LDGAVST 1133
>AL161729-2|CAH73818.1| 1296|Homo sapiens patched homolog 1
(Drosophila) protein.
Length = 1296
Score = 36.7 bits (81), Expect = 0.014
Identities = 27/67 (40%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 6 FGTSG--GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSV 179
FG G GI L+AV +V L+ +VGI VEF H+ +F RA AL M V
Sbjct: 917 FGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVALAFLTAIGDKNR-RAVLALEHMFAPV 975
Query: 180 LSGITLT 200
L G T
Sbjct: 976 LDGAVST 982
>AL161729-1|CAH73817.1| 1447|Homo sapiens patched homolog 1
(Drosophila) protein.
Length = 1447
Score = 36.7 bits (81), Expect = 0.014
Identities = 27/67 (40%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 6 FGTSG--GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSV 179
FG G GI L+AV +V L+ +VGI VEF H+ +F RA AL M V
Sbjct: 1068 FGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVALAFLTAIGDKNR-RAVLALEHMFAPV 1126
Query: 180 LSGITLT 200
L G T
Sbjct: 1127 LDGAVST 1133
>AB209495-1|BAD92732.1| 586|Homo sapiens patched variant protein.
Length = 586
Score = 36.7 bits (81), Expect = 0.014
Identities = 27/67 (40%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 6 FGTSG--GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSV 179
FG G GI L+AV +V L+ +VGI VEF H+ +F RA AL M V
Sbjct: 504 FGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVALAFLTAIGDKNR-RAVLALEHMFAPV 562
Query: 180 LSGITLT 200
L G T
Sbjct: 563 LDGAVST 569
>AY438664-1|AAR05447.1| 1203|Homo sapiens patched homolog 2
(Drosophila) protein.
Length = 1203
Score = 34.3 bits (75), Expect = 0.073
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 6 FGTSG--GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSV 179
FG G GI L+A+ +V LV +VGI VEF H+ F RA+ AL V
Sbjct: 1004 FGIMGFLGIKLSAIPVVILVASVGIGVEFTVHVALGFLTTQGSRNL-RAAHALEHTFAPV 1062
Query: 180 LSGITLT 200
G T
Sbjct: 1063 TDGAIST 1069
>AY359016-1|AAQ89375.1| 1203|Homo sapiens Patched 2 protein.
Length = 1203
Score = 34.3 bits (75), Expect = 0.073
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 6 FGTSG--GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSV 179
FG G GI L+A+ +V LV +VGI VEF H+ F RA+ AL V
Sbjct: 1004 FGIMGFLGIKLSAIPVVILVASVGIGVEFTVHVALGFLTTQGSRNL-RAAHALEHTFAPV 1062
Query: 180 LSGITLT 200
G T
Sbjct: 1063 TDGAIST 1069
>AY358555-1|AAQ88919.1| 1211|Homo sapiens Patched 2 protein.
Length = 1211
Score = 34.3 bits (75), Expect = 0.073
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 6 FGTSG--GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSV 179
FG G GI L+A+ +V LV +VGI VEF H+ F RA+ AL V
Sbjct: 1004 FGIMGFLGIKLSAIPVVILVASVGIGVEFTVHVALGFLTTQGSRNL-RAAHALEHTFAPV 1062
Query: 180 LSGITLT 200
G T
Sbjct: 1063 TDGAIST 1069
>AL592166-5|CAI13000.1| 1203|Homo sapiens patched homolog 2
(Drosophila) protein.
Length = 1203
Score = 34.3 bits (75), Expect = 0.073
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 6 FGTSG--GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSV 179
FG G GI L+A+ +V LV +VGI VEF H+ F RA+ AL V
Sbjct: 1004 FGIMGFLGIKLSAIPVVILVASVGIGVEFTVHVALGFLTTQGSRNL-RAAHALEHTFAPV 1062
Query: 180 LSGITLT 200
G T
Sbjct: 1063 TDGAIST 1069
>AL136380-1|CAI23127.1| 1203|Homo sapiens patched homolog 2
(Drosophila) protein.
Length = 1203
Score = 34.3 bits (75), Expect = 0.073
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 6 FGTSG--GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSV 179
FG G GI L+A+ +V LV +VGI VEF H+ F RA+ AL V
Sbjct: 1004 FGIMGFLGIKLSAIPVVILVASVGIGVEFTVHVALGFLTTQGSRNL-RAAHALEHTFAPV 1062
Query: 180 LSGITLT 200
G T
Sbjct: 1063 TDGAIST 1069
>AF119569-1|AAD17260.1| 1146|Homo sapiens patched 2 protein.
Length = 1146
Score = 34.3 bits (75), Expect = 0.073
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 6 FGTSG--GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSV 179
FG G GI L+A+ +V LV +VGI VEF H+ F RA+ AL V
Sbjct: 1004 FGIMGFLGIKLSAIPVVILVASVGIGVEFTVHVALGFLTTQGSRNL-RAAHALEHTFAPV 1062
Query: 180 LSGITLT 200
G T
Sbjct: 1063 TDGAIST 1069
>AF091501-1|AAC79847.1| 1203|Homo sapiens receptor protein patched 2
protein.
Length = 1203
Score = 34.3 bits (75), Expect = 0.073
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 6 FGTSG--GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSV 179
FG G GI L+A+ +V LV +VGI VEF H+ F RA+ AL V
Sbjct: 1004 FGIMGFLGIKLSAIPVVILVASVGIGVEFTVHVALGFLTTQGSRNL-RAAHALEHTFAPV 1062
Query: 180 LSGITLT 200
G T
Sbjct: 1063 TDGAIST 1069
>AF087651-1|AAD25953.1| 1203|Homo sapiens patched 2 protein.
Length = 1203
Score = 34.3 bits (75), Expect = 0.073
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 6 FGTSG--GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSV 179
FG G GI L+A+ +V LV +VGI VEF H+ F RA+ AL V
Sbjct: 1004 FGIMGFLGIKLSAIPVVILVASVGIGVEFTVHVALGFLTTQGSRNL-RAAHALEHTFAPV 1062
Query: 180 LSGITLT 200
G T
Sbjct: 1063 TDGAIST 1069
>BC094882-1|AAH94882.1| 739|Homo sapiens DKFZp547E087 protein
protein.
Length = 739
Score = 31.9 bits (69), Expect = 0.39
Identities = 22/61 (36%), Positives = 26/61 (42%)
Frame = -1
Query: 187 PESTDVPIMVSASEARSTPLPPPDTPKLCTKCEQNSTAMPTAITKLTSETAFRLIPPLVP 8
P S D I A R PLPP L T E+ TA+P + A RL PL P
Sbjct: 466 PPSADDNIKTPAERLRG-PLPPSADDNLKTPSERQLTALPPSADDNIKTPAERLRGPLPP 524
Query: 7 N 5
+
Sbjct: 525 S 525
>AL590989-2|CAH70606.1| 1438|Homo sapiens patched domain containing 2
protein.
Length = 1438
Score = 30.7 bits (66), Expect = 0.90
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 21 GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSVLSGI 191
G + AV ++L + VG +V++C HLV + +A +A T L +
Sbjct: 1276 GWEMGAVEAISLSILVGSSVDYCVHLVEGYLLAGENLPPHQAEDARTQRQWRTLEAV 1332
>AL031735-1|CAI22474.1| 1438|Homo sapiens patched domain containing 2
protein.
Length = 1438
Score = 30.7 bits (66), Expect = 0.90
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 21 GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSVLSGI 191
G + AV ++L + VG +V++C HLV + +A +A T L +
Sbjct: 1276 GWEMGAVEAISLSILVGSSVDYCVHLVEGYLLAGENLPPHQAEDARTQRQWRTLEAV 1332
>AB037758-1|BAA92575.1| 1438|Homo sapiens KIAA1337 protein protein.
Length = 1438
Score = 30.7 bits (66), Expect = 0.90
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 21 GISLNAVSLVNLVMAVGIAVEFCSHLVHSFXXXXXXXXXDRASEALTMMGTSVLSGI 191
G + AV ++L + VG +V++C HLV + +A +A T L +
Sbjct: 1276 GWEMGAVEAISLSILVGSSVDYCVHLVEGYLLAGENLPPHQAEDARTQRQWRTLEAV 1332
>BC090953-1|AAH90953.1| 630|Homo sapiens tripartite
motif-containing 41 protein.
Length = 630
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 136 TPLPPPDTPKLCTKCEQNSTAMP 68
TPLPPP P+ C C Q + P
Sbjct: 169 TPLPPPPAPRRCFTCPQCRKSFP 191
>BC071887-1|AAH71887.1| 361|Homo sapiens TRIM41 protein protein.
Length = 361
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 136 TPLPPPDTPKLCTKCEQNSTAMP 68
TPLPPP P+ C C Q + P
Sbjct: 149 TPLPPPPAPRRCFTCPQCRKSFP 171
>BC018765-1|AAH18765.2| 552|Homo sapiens TRIM41 protein protein.
Length = 552
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 136 TPLPPPDTPKLCTKCEQNSTAMP 68
TPLPPP P+ C C Q + P
Sbjct: 91 TPLPPPPAPRRCFTCPQCRKSFP 113
>BC004956-1|AAH04956.1| 361|Homo sapiens Unknown (protein for
IMAGE:3625550) protein.
Length = 361
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 136 TPLPPPDTPKLCTKCEQNSTAMP 68
TPLPPP P+ C C Q + P
Sbjct: 149 TPLPPPPAPRRCFTCPQCRKSFP 171
>AK074052-1|BAB84878.1| 255|Homo sapiens FLJ00123 protein protein.
Length = 255
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 136 TPLPPPDTPKLCTKCEQNSTAMP 68
TPLPPP P+ C C Q + P
Sbjct: 113 TPLPPPPAPRRCFTCPQCRKSFP 135
>AB100367-1|BAD07473.1| 518|Homo sapiens hypothetical protein
protein.
Length = 518
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 136 TPLPPPDTPKLCTKCEQNSTAMP 68
TPLPPP P+ C C Q + P
Sbjct: 169 TPLPPPPAPRRCFTCPQCRKSFP 191
>AB100366-1|BAD07472.1| 630|Homo sapiens hypothetical protein
protein.
Length = 630
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 136 TPLPPPDTPKLCTKCEQNSTAMP 68
TPLPPP P+ C C Q + P
Sbjct: 169 TPLPPPPAPRRCFTCPQCRKSFP 191
>AB063180-1|BAB70617.1| 439|Homo sapiens hypothetical protein
protein.
Length = 439
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 136 TPLPPPDTPKLCTKCEQNSTAMP 68
TPLPPP P+ C C Q + P
Sbjct: 90 TPLPPPPAPRRCFTCPQCRKSFP 112
>DQ009660-1|AAY26234.1| 1836|Homo sapiens expressed in synovial lining
protein protein.
Length = 1836
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -1
Query: 199 VSVMPESTDVPIMVSASEARSTPLPPPDTPKLCT-KCEQNSTAMPTAITKLTSETAFRLI 23
+ V+ ++T P +TPLP TP+ T + +T PT + T+ T
Sbjct: 1385 LEVIKKTTHPPTTTMQPTTTTTPLPTTTTPRPTTATTRRTTTRRPTTTVRTTTRTTTTTT 1444
Query: 22 P-PLVP 8
P P P
Sbjct: 1445 PKPTTP 1450
>BC146783-1|AAI46784.1| 1773|Homo sapiens FNDC1 protein protein.
Length = 1773
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -1
Query: 199 VSVMPESTDVPIMVSASEARSTPLPPPDTPKLCT-KCEQNSTAMPTAITKLTSETAFRLI 23
+ V+ ++T P +TPLP TP+ T + +T PT + T+ T
Sbjct: 1322 LEVIKKTTHPPTTTMQPTTTTTPLPTTTTPRPTTATTRRTTTRRPTTTVRTTTRTTTTTT 1381
Query: 22 P-PLVP 8
P P P
Sbjct: 1382 PKPTTP 1387
>AB058769-1|BAB47495.2| 1783|Homo sapiens KIAA1866 protein protein.
Length = 1783
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -1
Query: 199 VSVMPESTDVPIMVSASEARSTPLPPPDTPKLCT-KCEQNSTAMPTAITKLTSETAFRLI 23
+ V+ ++T P +TPLP TP+ T + +T PT + T+ T
Sbjct: 1332 LEVIKKTTHPPTTTMQPTTTTTPLPTTTTPRPTTATTRRTTTRRPTTTVRTTTRTTTTTT 1391
Query: 22 P-PLVP 8
P P P
Sbjct: 1392 PKPTTP 1397
>Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -1
Query: 160 VSASEARSTPLPPPDTPKLCTKC---EQNSTAMPTAITKLTSETAFRLIPPLVP 8
+++ S LPPPD P C KC ++ S+ P+A K S A PP +P
Sbjct: 510 LASRNTHSAELPPPDQPSPC-KCTCKKEPSSVSPSATVKTRSTKA---PPPHLP 559
>X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine
receptor alpha-4 subunit protein.
Length = 627
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -1
Query: 160 VSASEARSTPLPPPDTPKLCTKC---EQNSTAMPTAITKLTSETAFRLIPPLVP 8
+++ S LPPPD P C KC ++ S+ P+A K S A PP +P
Sbjct: 510 LASRNTHSAELPPPDQPSPC-KCTCKKEPSSVSPSATVKTRSTKA---PPPHLP 559
>X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine
receptor protein.
Length = 602
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -1
Query: 160 VSASEARSTPLPPPDTPKLCTKC---EQNSTAMPTAITKLTSETAFRLIPPLVP 8
+++ S LPPPD P C KC ++ S+ P+A K S A PP +P
Sbjct: 485 LASRNTHSAELPPPDQPSPC-KCTCKKEPSSVSPSATVKTRSTKA---PPPHLP 534
>U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -1
Query: 160 VSASEARSTPLPPPDTPKLCTKC---EQNSTAMPTAITKLTSETAFRLIPPLVP 8
+++ S LPPPD P C KC ++ S+ P+A K S A PP +P
Sbjct: 510 LASRNTHSAELPPPDQPSPC-KCTCKKEPSSVSPSATVKTRSTKA---PPPHLP 559
>L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha 4 subunit protein.
Length = 627
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -1
Query: 160 VSASEARSTPLPPPDTPKLCTKC---EQNSTAMPTAITKLTSETAFRLIPPLVP 8
+++ S LPPPD P C KC ++ S+ P+A K S A PP +P
Sbjct: 510 LASRNTHSAELPPPDQPSPC-KCTCKKEPSSVSPSATVKTRSTKA---PPPHLP 559
>DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 4 protein.
Length = 627
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -1
Query: 160 VSASEARSTPLPPPDTPKLCTKC---EQNSTAMPTAITKLTSETAFRLIPPLVP 8
+++ S LPPPD P C KC ++ S+ P+A K S A PP +P
Sbjct: 510 LASRNTHSAELPPPDQPSPC-KCTCKKEPSSVSPSATVKTRSTKA---PPPHLP 559
>BC096293-1|AAH96293.1| 451|Homo sapiens CHRNA4 protein protein.
Length = 451
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -1
Query: 160 VSASEARSTPLPPPDTPKLCTKC---EQNSTAMPTAITKLTSETAFRLIPPLVP 8
+++ S LPPPD P C KC ++ S+ P+A K S A PP +P
Sbjct: 334 LASRNTHSAELPPPDQPSPC-KCTCKKEPSSVSPSATVKTRSTKA---PPPHLP 383
>BC096292-1|AAH96292.1| 451|Homo sapiens CHRNA4 protein protein.
Length = 451
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -1
Query: 160 VSASEARSTPLPPPDTPKLCTKC---EQNSTAMPTAITKLTSETAFRLIPPLVP 8
+++ S LPPPD P C KC ++ S+ P+A K S A PP +P
Sbjct: 334 LASRNTHSAELPPPDQPSPC-KCTCKKEPSSVSPSATVKTRSTKA---PPPHLP 383
>BC096291-1|AAH96291.1| 556|Homo sapiens CHRNA4 protein protein.
Length = 556
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -1
Query: 160 VSASEARSTPLPPPDTPKLCTKC---EQNSTAMPTAITKLTSETAFRLIPPLVP 8
+++ S LPPPD P C KC ++ S+ P+A K S A PP +P
Sbjct: 439 LASRNTHSAELPPPDQPSPC-KCTCKKEPSSVSPSATVKTRSTKA---PPPHLP 488
>BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha 4 protein.
Length = 627
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -1
Query: 160 VSASEARSTPLPPPDTPKLCTKC---EQNSTAMPTAITKLTSETAFRLIPPLVP 8
+++ S LPPPD P C KC ++ S+ P+A K S A PP +P
Sbjct: 510 LASRNTHSAELPPPDQPSPC-KCTCKKEPSSVSPSATVKTRSTKA---PPPHLP 559
>BC092474-1|AAH92474.1| 304|Homo sapiens PRR16 protein protein.
Length = 304
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -1
Query: 133 PLPPPDTPKLC-TKCEQNSTAMPTAITKLTSETAFR 29
P PPP P+L KCE +PTA T+ T R
Sbjct: 120 PNPPPPPPRLTPVKCEDPKRVVPTANPVKTNGTLLR 155
>BC038838-1|AAH38838.1| 234|Homo sapiens PRR16 protein protein.
Length = 234
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -1
Query: 133 PLPPPDTPKLC-TKCEQNSTAMPTAITKLTSETAFR 29
P PPP P+L KCE +PTA T+ T R
Sbjct: 50 PNPPPPPPRLTPVKCEDPKRVVPTANPVKTNGTLLR 85
>AF242769-1|AAF65446.1| 281|Homo sapiens mesenchymal stem cell
protein DSC54 protein.
Length = 281
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -1
Query: 133 PLPPPDTPKLC-TKCEQNSTAMPTAITKLTSETAFR 29
P PPP P+L KCE +PTA T+ T R
Sbjct: 97 PNPPPPPPRLTPVKCEDPKRVVPTANPVKTNGTLLR 132
>AB209359-1|BAD92596.1| 533|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 4 precursor variant
protein.
Length = 533
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -1
Query: 160 VSASEARSTPLPPPDTPKLCTKC---EQNSTAMPTAITKLTSETAFRLIPPLVP 8
+++ S LPPPD P C KC ++ S+ P+A K S A PP +P
Sbjct: 416 LASRNTHSAELPPPDQPSPC-KCTCKKEPSSVSPSATVKTRSTKA---PPPHLP 465
>AK126894-1|BAC86739.1| 297|Homo sapiens protein ( Homo sapiens
cDNA FLJ44946 fis, clone BRAMY4001863, highly similar
to Mus musculus enabled homolog (Drosophila) (Enah). ).
Length = 297
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = -1
Query: 187 PESTDVPIMVSASEARSTPLPPPDTPKLCTKCEQNST-AMPTAITKLTSETAF-RLIPPL 14
P +P + S S S PPP TP T + S P+A + ET +PP
Sbjct: 31 PPPPPLPSLASLSHCGSQASPPPSTPIASTPSSKPSVLPSPSAAAPASVETPLPNQVPPP 90
Query: 13 VP 8
P
Sbjct: 91 PP 92
>DQ847274-1|ABH10140.1| 914|Homo sapiens epithelial cell
transforming sequence 2 oncogene protein splice variant
b protein.
Length = 914
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -1
Query: 181 STDVPIMVSASEARSTPLPPPDTPKLCTKCEQNSTAMPT 65
S + ++ S + + DTPK CTK ++ST +P+
Sbjct: 410 SLSIGSLLDISNTPESSINYGDTPKSCTKSSKSSTPVPS 448
>BC112086-1|AAI12087.1| 883|Homo sapiens epithelial cell
transforming sequence 2 oncogene protein.
Length = 883
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -1
Query: 181 STDVPIMVSASEARSTPLPPPDTPKLCTKCEQNSTAMPT 65
S + ++ S + + DTPK CTK ++ST +P+
Sbjct: 379 SLSIGSLLDISNTPESSINYGDTPKSCTKSSKSSTPVPS 417
>BC000263-1|AAH00263.1| 798|Homo sapiens ubiquitin specific
peptidase 10 protein.
Length = 798
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 172 VPIMVSASEARST-PLPPPDTPKLCTKCEQNST 77
VP VSA +A +PPP TP+ C QNST
Sbjct: 185 VPNSVSAEDAEFMGDMPPPLTPRTCNS-PQNST 216
>AY376439-1|AAQ83675.1| 882|Homo sapiens epithelial cell
transforming 2 protein.
Length = 882
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -1
Query: 181 STDVPIMVSASEARSTPLPPPDTPKLCTKCEQNSTAMPT 65
S + ++ S + + DTPK CTK ++ST +P+
Sbjct: 378 SLSIGSLLDISNTPESSINYGDTPKSCTKSSKSSTPVPS 416
>AK023267-1|BAB14498.1| 798|Homo sapiens protein ( Homo sapiens
cDNA FLJ13205 fis, clone NT2RP3004534, highly similar to
Mouse oncogene (ect2) mRNA. ).
Length = 798
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -1
Query: 181 STDVPIMVSASEARSTPLPPPDTPKLCTKCEQNSTAMPT 65
S + ++ S + + DTPK CTK ++ST +P+
Sbjct: 379 SLSIGSLLDISNTPESSINYGDTPKSCTKSSKSSTPVPS 417
>X63753-1|CAA45282.1| 1523|Homo sapiens son-a protein.
Length = 1523
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -1
Query: 202 FVSVMPESTDVPIMVSASEARSTPLPP---PDTPKLCTKCEQNSTAMPTAITKLTSETAF 32
+ E+ VP + PLPP P TP L + A+PT + LT+E +
Sbjct: 128 YTDTYTEAYMVPPLPPEEPPTMPPLPPEEPPMTPPLPPEEPPEGPALPTEQSALTAENTW 187
Query: 31 RLIPPLVPN 5
P +P+
Sbjct: 188 PTEVPSLPS 196
>BC141881-1|AAI41882.1| 1537|Homo sapiens WNK1 protein protein.
Length = 1537
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 157 SASEARSTPLPPPDTPKLCTKCEQNSTAMPTAITKLTSETAF 32
SAS ST P P P + ++ ST + +T +++ T+F
Sbjct: 612 SASAGGSTATPGPKPPAVVSQQAAGSTTVGATLTSVSTTTSF 653
>BC105992-1|AAI05993.1| 275|Homo sapiens SYNGR2 protein protein.
Length = 275
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 127 PPPDTPKLCTKCEQNSTAMPTAITKLTSETAFRL-IPPL 14
PPP LC+ C PT+ T+L T+ R+ + PL
Sbjct: 177 PPPTCTLLCSPCRVCWPPWPTSATRLAWTTSSRITLTPL 215
>BC064947-1|AAH64947.1| 735|Homo sapiens SMPD4 protein protein.
Length = 735
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 190 MPESTDVPIMVSASEARSTPLPPPDTPKL 104
+P VP +S+S ++P PPP TP +
Sbjct: 104 LPTEGSVPPPLSSSPGGTSPSPPPRTPAI 132
>BC027971-1|AAH27971.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 172 VPIMVSASEARSTPLPPPDTPKLCTKCEQNSTAMPTAITK 53
+PIM STP P + P+ + E S PT ++
Sbjct: 408 IPIMEDGGGGSSTPEDPAEAPRTLLEFETQSMVPPTGFSE 447
>BC022938-1|AAH22938.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 172 VPIMVSASEARSTPLPPPDTPKLCTKCEQNSTAMPTAITK 53
+PIM STP P + P+ + E S PT ++
Sbjct: 408 IPIMEDGGGGSSTPEDPAEAPRTLLEFETQSMVPPTGFSE 447
>BC010571-1|AAH10571.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 172 VPIMVSASEARSTPLPPPDTPKLCTKCEQNSTAMPTAITK 53
+PIM STP P + P+ + E S PT ++
Sbjct: 408 IPIMEDGGGGSSTPEDPAEAPRTLLEFETQSMVPPTGFSE 447
>BC009117-1|AAH09117.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 172 VPIMVSASEARSTPLPPPDTPKLCTKCEQNSTAMPTAITK 53
+PIM STP P + P+ + E S PT ++
Sbjct: 408 IPIMEDGGGGSSTPEDPAEAPRTLLEFETQSMVPPTGFSE 447
>BC002422-1|AAH02422.1| 1365|Homo sapiens SON protein protein.
Length = 1365
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -1
Query: 202 FVSVMPESTDVPIMVSASEARSTPLPP---PDTPKLCTKCEQNSTAMPTAITKLTSETAF 32
+ E+ VP + PLPP P TP L + A+PT + LT+E +
Sbjct: 593 YTDTYTEAYMVPPLPPEEPPTMPPLPPEEPPMTPPLPPEEPPEGPALPTEQSALTAENTW 652
Query: 31 RLIPPLVPN 5
P +P+
Sbjct: 653 PTEVPSLPS 661
>AY358372-1|AAQ88738.1| 911|Homo sapiens Brevican Core Pro protein.
Length = 911
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 172 VPIMVSASEARSTPLPPPDTPKLCTKCEQNSTAMPTAITK 53
+PIM STP P + P+ + E S PT ++
Sbjct: 408 IPIMEDGGGGSSTPEDPAEAPRTLLEFETQSMVPPTGFSE 447
>AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein.
Length = 2386
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -1
Query: 202 FVSVMPESTDVPIMVSASEARSTPLPP---PDTPKLCTKCEQNSTAMPTAITKLTSETAF 32
+ E+ VP + PLPP P TP L + A+PT + LT+E +
Sbjct: 1096 YTDTYTEAYMVPPLPPEEPPTMPPLPPEEPPMTPPLPPEEPPEGPALPTEQSALTAENTW 1155
Query: 31 RLIPPLVPN 5
P +P+
Sbjct: 1156 PTEVPSLPS 1164
>AY007241-1|AAG01897.1| 516|Homo sapiens hyaluronan binding protein
protein.
Length = 516
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 172 VPIMVSASEARSTPLPPPDTPKLCTKCEQNSTAMPTAITK 53
+PIM STP P + P+ + E S PT ++
Sbjct: 348 IPIMEDGGGGSSTPEDPAEAPRTLLEFETQSMVPPTGFSE 387
>AL590666-18|CAI16352.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 172 VPIMVSASEARSTPLPPPDTPKLCTKCEQNSTAMPTAITK 53
+PIM STP P + P+ + E S PT ++
Sbjct: 408 IPIMEDGGGGSSTPEDPAEAPRTLLEFETQSMVPPTGFSE 447
>AL445198-5|CAI13083.1| 532|Homo sapiens nuclear factor I/A
protein.
Length = 532
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 145 ARSTPLPPPDTPKLCTKCEQNSTAMPTAITKLTSETA 35
AR PLP PDT K T + A PT+ T T T+
Sbjct: 469 ARPVPLPVPDT-KPPTTSTEGGAASPTSPTYSTPSTS 504
>AL445198-4|CAI13079.1| 466|Homo sapiens nuclear factor I/A
protein.
Length = 466
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 145 ARSTPLPPPDTPKLCTKCEQNSTAMPTAITKLTSETA 35
AR PLP PDT K T + A PT+ T T T+
Sbjct: 403 ARPVPLPVPDT-KPPTTSTEGGAASPTSPTYSTPSTS 438
>AL445198-3|CAI13081.1| 509|Homo sapiens nuclear factor I/A
protein.
Length = 509
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 145 ARSTPLPPPDTPKLCTKCEQNSTAMPTAITKLTSETA 35
AR PLP PDT K T + A PT+ T T T+
Sbjct: 446 ARPVPLPVPDT-KPPTTSTEGGAASPTSPTYSTPSTS 481
>AL445198-2|CAI13082.1| 487|Homo sapiens nuclear factor I/A
protein.
Length = 487
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 145 ARSTPLPPPDTPKLCTKCEQNSTAMPTAITKLTSETA 35
AR PLP PDT K T + A PT+ T T T+
Sbjct: 424 ARPVPLPVPDT-KPPTTSTEGGAASPTSPTYSTPSTS 459
>AL365181-16|CAI13060.1| 671|Homo sapiens brevican protein.
Length = 671
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 172 VPIMVSASEARSTPLPPPDTPKLCTKCEQNSTAMPTAITK 53
+PIM STP P + P+ + E S PT ++
Sbjct: 408 IPIMEDGGGGSSTPEDPAEAPRTLLEFETQSMVPPTGFSE 447
>AL365181-12|CAI13056.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 172 VPIMVSASEARSTPLPPPDTPKLCTKCEQNSTAMPTAITK 53
+PIM STP P + P+ + E S PT ++
Sbjct: 408 IPIMEDGGGGSSTPEDPAEAPRTLLEFETQSMVPPTGFSE 447
>AL096888-6|CAI23242.1| 532|Homo sapiens nuclear factor I/A
protein.
Length = 532
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 145 ARSTPLPPPDTPKLCTKCEQNSTAMPTAITKLTSETA 35
AR PLP PDT K T + A PT+ T T T+
Sbjct: 469 ARPVPLPVPDT-KPPTTSTEGGAASPTSPTYSTPSTS 504
>AL096888-5|CAI23239.1| 466|Homo sapiens nuclear factor I/A
protein.
Length = 466
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 145 ARSTPLPPPDTPKLCTKCEQNSTAMPTAITKLTSETA 35
AR PLP PDT K T + A PT+ T T T+
Sbjct: 403 ARPVPLPVPDT-KPPTTSTEGGAASPTSPTYSTPSTS 438
>AL096888-4|CAI23240.1| 509|Homo sapiens nuclear factor I/A
protein.
Length = 509
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 145 ARSTPLPPPDTPKLCTKCEQNSTAMPTAITKLTSETA 35
AR PLP PDT K T + A PT+ T T T+
Sbjct: 446 ARPVPLPVPDT-KPPTTSTEGGAASPTSPTYSTPSTS 481
>AL096888-3|CAI23237.1| 487|Homo sapiens nuclear factor I/A
protein.
Length = 487
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 145 ARSTPLPPPDTPKLCTKCEQNSTAMPTAITKLTSETA 35
AR PLP PDT K T + A PT+ T T T+
Sbjct: 424 ARPVPLPVPDT-KPPTTSTEGGAASPTSPTYSTPSTS 459
>AL096888-2|CAI23238.1| 380|Homo sapiens nuclear factor I/A
protein.
Length = 380
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 145 ARSTPLPPPDTPKLCTKCEQNSTAMPTAITKLTSETA 35
AR PLP PDT K T + A PT+ T T T+
Sbjct: 317 ARPVPLPVPDT-KPPTTSTEGGAASPTSPTYSTPSTS 352
>AK000304-1|BAA91070.1| 798|Homo sapiens protein ( Homo sapiens
cDNA FLJ20297 fis, clone HEP05942. ).
Length = 798
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 190 MPESTDVPIMVSASEARSTPLPPPDTPKL 104
+P VP +S+S ++P PPP TP +
Sbjct: 196 LPTEGSVPPPLSSSPGGTSPSPPPRTPAI 224
>AJ296290-1|CAC15059.1| 2382|Homo sapiens putative protein kinase
protein.
Length = 2382
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 157 SASEARSTPLPPPDTPKLCTKCEQNSTAMPTAITKLTSETAF 32
SAS ST P P P + ++ ST + +T +++ T+F
Sbjct: 1457 SASAGGSTATPGPKPPAVVSQQAAGSTTVGATLTSVSTTTSF 1498
>AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein
isoform F protein.
Length = 2426
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -1
Query: 202 FVSVMPESTDVPIMVSASEARSTPLPP---PDTPKLCTKCEQNSTAMPTAITKLTSETAF 32
+ E+ VP + PLPP P TP L + A+PT + LT+E +
Sbjct: 1136 YTDTYTEAYMVPPLPPEEPPTMPPLPPEEPPMTPPLPPEEPPEGPALPTEQSALTAENTW 1195
Query: 31 RLIPPLVPN 5
P +P+
Sbjct: 1196 PTEVPSLPS 1204
>AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein
isoform E protein.
Length = 2108
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -1
Query: 202 FVSVMPESTDVPIMVSASEARSTPLPP---PDTPKLCTKCEQNSTAMPTAITKLTSETAF 32
+ E+ VP + PLPP P TP L + A+PT + LT+E +
Sbjct: 1136 YTDTYTEAYMVPPLPPEEPPTMPPLPPEEPPMTPPLPPEEPPEGPALPTEQSALTAENTW 1195
Query: 31 RLIPPLVPN 5
P +P+
Sbjct: 1196 PTEVPSLPS 1204
>AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein
isoform C protein.
Length = 2325
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -1
Query: 202 FVSVMPESTDVPIMVSASEARSTPLPP---PDTPKLCTKCEQNSTAMPTAITKLTSETAF 32
+ E+ VP + PLPP P TP L + A+PT + LT+E +
Sbjct: 1136 YTDTYTEAYMVPPLPPEEPPTMPPLPPEEPPMTPPLPPEEPPEGPALPTEQSALTAENTW 1195
Query: 31 RLIPPLVPN 5
P +P+
Sbjct: 1196 PTEVPSLPS 1204
>AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein
isoform B protein.
Length = 2303
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -1
Query: 202 FVSVMPESTDVPIMVSASEARSTPLPP---PDTPKLCTKCEQNSTAMPTAITKLTSETAF 32
+ E+ VP + PLPP P TP L + A+PT + LT+E +
Sbjct: 1136 YTDTYTEAYMVPPLPPEEPPTMPPLPPEEPPMTPPLPPEEPPEGPALPTEQSALTAENTW 1195
Query: 31 RLIPPLVPN 5
P +P+
Sbjct: 1196 PTEVPSLPS 1204
>AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein
isoform A protein.
Length = 2140
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -1
Query: 202 FVSVMPESTDVPIMVSASEARSTPLPP---PDTPKLCTKCEQNSTAMPTAITKLTSETAF 32
+ E+ VP + PLPP P TP L + A+PT + LT+E +
Sbjct: 817 YTDTYTEAYMVPPLPPEEPPTMPPLPPEEPPMTPPLPPEEPPEGPALPTEQSALTAENTW 876
Query: 31 RLIPPLVPN 5
P +P+
Sbjct: 877 PTEVPSLPS 885
>AF229053-1|AAG23135.1| 671|Homo sapiens chondroitin sulfate
proteoglycan BEHAB/brevican protein.
Length = 671
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 172 VPIMVSASEARSTPLPPPDTPKLCTKCEQNSTAMPTAITK 53
+PIM STP P + P+ + E S PT ++
Sbjct: 408 IPIMEDGGGGSSTPEDPAEAPRTLLEFETQSMVPPTGFSE 447
>AF228710-1|AAG23134.1| 911|Homo sapiens chondroitin sulfate
proteoglycan BEHAB/brevican protein.
Length = 911
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 172 VPIMVSASEARSTPLPPPDTPKLCTKCEQNSTAMPTAITK 53
+PIM STP P + P+ + E S PT ++
Sbjct: 408 IPIMEDGGGGSSTPEDPAEAPRTLLEFETQSMVPPTGFSE 447
>AC018804-2|AAY14883.1| 798|Homo sapiens unknown protein.
Length = 798
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 190 MPESTDVPIMVSASEARSTPLPPPDTPKL 104
+P VP +S+S ++P PPP TP +
Sbjct: 196 LPTEGSVPPPLSSSPGGTSPSPPPRTPAI 224
>AB209570-1|BAD92807.1| 850|Homo sapiens brevican isoform 1 variant
protein.
Length = 850
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 172 VPIMVSASEARSTPLPPPDTPKLCTKCEQNSTAMPTAITK 53
+PIM STP P + P+ + E S PT ++
Sbjct: 347 IPIMEDGGGGSSTPEDPAEAPRTLLEFETQSMVPPTGFSE 386
>AB037860-1|BAA92677.1| 561|Homo sapiens KIAA1439 protein protein.
Length = 561
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 145 ARSTPLPPPDTPKLCTKCEQNSTAMPTAITKLTSETA 35
AR PLP PDT K T + A PT+ T T T+
Sbjct: 498 ARPVPLPVPDT-KPPTTSTEGGAASPTSPTYSTPSTS 533
>AB037839-1|BAA92656.1| 889|Homo sapiens KIAA1418 protein protein.
Length = 889
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 190 MPESTDVPIMVSASEARSTPLPPPDTPKL 104
+P VP +S+S ++P PPP TP +
Sbjct: 258 LPTEGSVPPPLSSSPGGTSPSPPPRTPAI 286
>AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein.
Length = 2309
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -1
Query: 202 FVSVMPESTDVPIMVSASEARSTPLPP---PDTPKLCTKCEQNSTAMPTAITKLTSETAF 32
+ E+ VP + PLPP P TP L + A+PT + LT+E +
Sbjct: 1142 YTDTYTEAYMVPPLPPEEPPTMPPLPPEEPPMTPPLPPEEPPEGPALPTEQSALTAENTW 1201
Query: 31 RLIPPLVPN 5
P +P+
Sbjct: 1202 PTEVPSLPS 1210
>AB002342-1|BAA20802.2| 2066|Homo sapiens KIAA0344 protein.
Length = 2066
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 157 SASEARSTPLPPPDTPKLCTKCEQNSTAMPTAITKLTSETAF 32
SAS ST P P P + ++ ST + +T +++ T+F
Sbjct: 1142 SASAGGSTATPGPKPPAVVSQQAAGSTTVGATLTSVSTTTSF 1183
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,042,519
Number of Sequences: 237096
Number of extensions: 300599
Number of successful extensions: 2187
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 2045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2182
length of database: 76,859,062
effective HSP length: 45
effective length of database: 66,189,742
effective search space used: 1389984582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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