Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_B24
         (438 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        26   0.67 
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    23   4.8  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   6.3  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   6.3  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    23   6.3  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    22   8.3  

>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.8 bits (54), Expect = 0.67
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 63  NSSRTSRRRLQATL 22
           NSSRT+ RRLQATL
Sbjct: 350 NSSRTAIRRLQATL 363


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -3

Query: 193 PSPEFSRSAESIRTPPQMRCSSRSEPY 113
           P P  + + E    PP++ C+   E Y
Sbjct: 39  PEPSTTEATEEESPPPKIECTDPREVY 65


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 22.6 bits (46), Expect = 6.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 101 RIPWNSNAQAEKKTLPGPLG 42
           +IPW+ NA+A  K   G  G
Sbjct: 317 QIPWDRNAEALAKWASGQTG 336


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 6.3
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2

Query: 341 PVLRANPYSEVTDPICRLPLPTLFYR 264
           P L     S +  P CRLP P L  R
Sbjct: 89  PELVTRSLSNLELPSCRLPCPNLIPR 114


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 22.6 bits (46), Expect = 6.3
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -3

Query: 373 RIRFPSKPDAPRSSEPILIPKLRIQFADFPYL 278
           R+R  +    P+    +++PKL+ + A  P+L
Sbjct: 5   RLRLITSFGTPQDKRTMVLPKLKDETAVMPFL 36


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 385  AWSPTPGDSSEDDD 426
            A+ P P + S+DDD
Sbjct: 1115 AYQPAPSNDSDDDD 1128


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,633
Number of Sequences: 2352
Number of extensions: 10710
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36568146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)