Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_B23
(160 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1107 - 24024387-24024497,24025799-24026410 32 0.072
01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,650... 30 0.22
03_01_0545 - 4086692-4087591 30 0.29
07_03_1139 + 24254662-24255306 29 0.39
01_02_0031 + 10364487-10365407 27 1.6
07_03_1257 - 25241194-25242018 27 2.7
01_01_0668 - 5109476-5110112,5110196-5110439,5110519-5110917,511... 26 3.6
10_08_0352 + 17091637-17091945,17092049-17096617,17096975-170971... 26 4.8
07_03_1748 - 29195037-29195427,29195552-29195679,29195810-291959... 26 4.8
06_01_1114 - 9179614-9180167,9180223-9180544,9181524-9181820,918... 26 4.8
04_03_0092 + 11079185-11079589,11081319-11081409,11081507-110816... 26 4.8
03_02_0873 - 11991947-11992059,11992148-11992337,11992437-119926... 26 4.8
12_01_0176 - 1308813-1309640 25 6.3
09_06_0041 - 20440266-20441381 25 6.3
07_03_1225 + 24996082-24996774 25 6.3
07_03_1144 + 24331104-24331292,24331387-24331611,24332133-243325... 25 6.3
04_03_0301 + 14094370-14094584,14096694-14096727,14098084-140980... 25 6.3
08_02_0776 - 21083181-21083187,21083256-21083683,21083800-210840... 25 8.3
07_03_1166 - 24461881-24462013,24462255-24462643,24462877-244629... 25 8.3
07_03_0206 + 15177873-15177921,15178047-15178174,15178431-151785... 25 8.3
07_03_0154 + 14509979-14512033 25 8.3
07_03_0064 + 12995669-12995904,12996299-12996533,12998223-129983... 25 8.3
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 31.9 bits (69), Expect = 0.072
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 160 PPPAHEITSAPHVTPITTTSLAQTRPSAALHDTPYHP 50
PP + + T AP P TTT A + P AA TP P
Sbjct: 36 PPASSKKTPAPAAAPTTTTPPAASTPPAAAPTTPATP 72
>01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,
6501915-6502156,6502229-6502457,6503020-6503184,
6503279-6503605,6504150-6504191,6504333-6504400,
6504748-6504934,6506249-6506311,6506748-6506790,
6506919-6507019,6507110-6507184,6507359-6507445,
6507593-6507682,6507906-6507992,6508585-6508783,
6509113-6509177,6509502-6509606,6509726-6509871,
6510100-6510224,6510335-6510437,6510482-6510596,
6510734-6510869,6511298-6511387,6511484-6511578,
6511698-6511763,6511868-6511936,6512034-6512147,
6512241-6512448,6512545-6512600,6512818-6513552
Length = 1671
Score = 30.3 bits (65), Expect = 0.22
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 28 CVAEPSVQGDMVCRAGRRWGESAPSWW 108
C + P V+ D+ A R W +AP WW
Sbjct: 987 CCSHPRVETDLKTLARRFWKVAAPYWW 1013
>03_01_0545 - 4086692-4087591
Length = 299
Score = 29.9 bits (64), Expect = 0.29
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -1
Query: 139 TSAPHVTPITTTSLAQTRPSAALHDTPYHPEQTVRRHRSRASCR 8
+SA P T TS Q S + PYH + RS SCR
Sbjct: 90 SSARQRPPWTCTSPLQRHGSTTMQALPYHTRTPLTNSRSSLSCR 133
>07_03_1139 + 24254662-24255306
Length = 214
Score = 29.5 bits (63), Expect = 0.39
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = -1
Query: 160 PPPAHE---ITSAPHVTPITTTSLAQTRPSAALHDTPYHPEQTVRRHRSRA 17
PPPAH T+ PH+ P+ P+A + T PE+ R S A
Sbjct: 150 PPPAHRPDPATAVPHLPPLGRDPSPSPLPTAGENSTSPTPEREHHRGESPA 200
>01_02_0031 + 10364487-10365407
Length = 306
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -1
Query: 160 PPPAHEITSAPHVTPITTTSLAQTRPSAALHDTPYHPEQ 44
PPPA + AP T +T + P A H +H Q
Sbjct: 183 PPPAPMLPLAPPPTHVTPAMPLSSMPPPAFHGMNHHHHQ 221
>07_03_1257 - 25241194-25242018
Length = 274
Score = 26.6 bits (56), Expect = 2.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 160 PPPAHEITSAPHVTPITTTSLAQTRPSAALHDTPYHP 50
P PA +T + T + +T+ + RP LH P HP
Sbjct: 63 PSPA-SMTPSRCRTTLASTTTTRRRPPRRLHSRPRHP 98
>01_01_0668 -
5109476-5110112,5110196-5110439,5110519-5110917,
5111390-5111668,5111886-5112257,5112371-5112475,
5112832-5112909,5112990-5113199,5113287-5113406,
5113508-5113606,5113685-5113750,5113914-5114141,
5114216-5114521,5115324-5115381
Length = 1066
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -1
Query: 160 PPPAHEITSAP-HVTPITTTSLAQTRPSAALHDTP 59
PPP AP HV P+ A P+ L TP
Sbjct: 126 PPPVELTPPAPTHVAPVAPPQAAVENPAPVLPGTP 160
>10_08_0352 + 17091637-17091945,17092049-17096617,17096975-17097187,
17097266-17097494,17097857-17097981
Length = 1814
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 115 ITTTSLAQTRPSAALHDTPYHPE 47
+ T AQ PS+ LHD P+ P+
Sbjct: 1374 VHATDTAQDLPSSLLHDDPHLPD 1396
>07_03_1748 -
29195037-29195427,29195552-29195679,29195810-29195938,
29196334-29196412,29196508-29196671,29196754-29196936,
29197021-29197146,29197237-29197328,29197412-29197508,
29198013-29198339
Length = 571
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -1
Query: 157 PPAHEITSAPHVTPITTTSLAQTRPSAALHDTPYHP 50
PPA T + + TT+ A + PS+A P P
Sbjct: 61 PPARAATPSSQADDVPTTTTATSPPSSAPSSPPSSP 96
>06_01_1114 -
9179614-9180167,9180223-9180544,9181524-9181820,
9181991-9182878,9182896-9182941,9182964-9183350,
9183648-9183985
Length = 943
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 130 PHVTPITTTSLAQTRPSAALHDTPYHPEQTV 38
P+ P TT +++ PS+ D PE+TV
Sbjct: 354 PYPNPAGTTGMSKEAPSSDSADKEVQPEKTV 384
>04_03_0092 +
11079185-11079589,11081319-11081409,11081507-11081612,
11081694-11081976,11082062-11082210,11083582-11083735,
11083837-11084793
Length = 714
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -1
Query: 139 TSAPHVTPITTTSLAQTRPSAALHDTPYHPEQTVRRHRS 23
T + H + + T + T+ + + H P+H V+RH S
Sbjct: 310 TYSVHGSALGTKEVEATKNNLSWHHEPFHVPDEVKRHWS 348
>03_02_0873 -
11991947-11992059,11992148-11992337,11992437-11992654,
11993409-11993503,11994201-11994406,11994658-11994750,
11994904-11994960,11995070-11995198,11996377-11996745
Length = 489
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 52 GDMVCRAGRRWGESAPS 102
G++V AGRRWG A S
Sbjct: 62 GELVAAAGRRWGPRAVS 78
>12_01_0176 - 1308813-1309640
Length = 275
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = -1
Query: 160 PPPAHEITSAPHVTPITTTSLAQTRPSAALHDTPYHPEQTVR 35
PPP H+ +A TP+ + PS + +Q +R
Sbjct: 18 PPPGHDAAAATETTPLHPSFRGAPPPSPGTYIIQIPKDQVLR 59
>09_06_0041 - 20440266-20441381
Length = 371
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 10 GTRLCFCVAEPSVQGDMVCRAGRRWGE 90
G C P V+GD + AGRR GE
Sbjct: 304 GFAACVDQDHPGVRGDCLYAAGRRLGE 330
>07_03_1225 + 24996082-24996774
Length = 230
Score = 25.4 bits (53), Expect = 6.3
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 154 PAHEITSAPHVTPITTTSLAQTRPSAALHDTPYHPEQTVR 35
PAH HV P S A +AAL +P +P VR
Sbjct: 86 PAHVAAVQGHVLPNALDSTAIDWVNAALVPSPVNPGSAVR 125
>07_03_1144 +
24331104-24331292,24331387-24331611,24332133-24332521,
24332762-24332856,24333300-24333673
Length = 423
Score = 25.4 bits (53), Expect = 6.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 25 FCVAEPSVQGDMVCRAG 75
FC+ +PS+ G +C AG
Sbjct: 228 FCMEQPSIAGRFLCAAG 244
>04_03_0301 +
14094370-14094584,14096694-14096727,14098084-14098095,
14098400-14098574,14099064-14099299,14099396-14100457
Length = 577
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -1
Query: 136 SAPHVTPITTTSLAQTRPSAALH-DTPYHPEQTVRR 32
+APHV PI + A P+AA P + RR
Sbjct: 378 AAPHVAPIAAVASAPAAPAAAARAAAPVRAARVARR 413
>08_02_0776 -
21083181-21083187,21083256-21083683,21083800-21084048,
21084172-21084248,21084351-21084483
Length = 297
Score = 25.0 bits (52), Expect = 8.3
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -1
Query: 157 PPAHEITSAPHVTPITTTSLAQTRPSAA----LHDTPYHPEQTVRRHRS 23
PP H SA + +TTTS ++ AA LH + EQ V+ R+
Sbjct: 213 PPRHHRQSAATDSCVTTTSSSEAESKAAGSKRLHTSDCTVEQPVQGKRA 261
>07_03_1166 -
24461881-24462013,24462255-24462643,24462877-24462948,
24463718-24463887,24464232-24464362,24464744-24464860,
24464969-24465351,24465582-24465764
Length = 525
Score = 25.0 bits (52), Expect = 8.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 25 FCVAEPSVQGDMVCRAG 75
FC+ +PS+ G +C AG
Sbjct: 149 FCMDQPSIAGRFLCAAG 165
Score = 25.0 bits (52), Expect = 8.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 25 FCVAEPSVQGDMVCRAG 75
FC+ +PS+ G +C AG
Sbjct: 442 FCMDQPSIAGRFLCAAG 458
>07_03_0206 +
15177873-15177921,15178047-15178174,15178431-15178521,
15178836-15179311
Length = 247
Score = 25.0 bits (52), Expect = 8.3
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
Frame = -1
Query: 106 TSLAQTRPSAA------LHDTPYHPE-QTVRRHRSRASCRTS 2
TS ++TR A+ D+P P+ + RRHRSR S TS
Sbjct: 101 TSFSETRSEASGSMDITAGDSPPSPDSRRSRRHRSRGSAATS 142
>07_03_0154 + 14509979-14512033
Length = 684
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -1
Query: 160 PPPAHEITSAPHVTPI-TTTSLAQTRPSAALHDTPYHPEQ 44
PPP ++ +A TP+ T L+ L P +PE+
Sbjct: 62 PPPPPQVQAATVATPVPATPDLSAAAVMTPLQSLPPNPEE 101
>07_03_0064 +
12995669-12995904,12996299-12996533,12998223-12998384,
12999446-12999566,13000095-13001608
Length = 755
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -1
Query: 157 PPAHEITSAPHVTPITTTSLAQTRPSAA 74
P AH +T P + P+T PS A
Sbjct: 283 PQAHNMTLGPLIHPVTVLEQCHVSPSPA 310
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,611,187
Number of Sequences: 37544
Number of extensions: 71001
Number of successful extensions: 384
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 381
length of database: 14,793,348
effective HSP length: 33
effective length of database: 13,554,396
effective search space used: 257533524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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