Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_B23
(160 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 30 0.19
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 29 0.34
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 28 0.78
Z70753-2|CAA94760.1| 275|Caenorhabditis elegans Hypothetical pr... 28 1.0
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 27 1.8
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 25 5.5
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 25 5.5
U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily ass... 25 5.5
U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily ass... 25 5.5
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 25 7.2
U00048-11|AAB53833.1| 995|Caenorhabditis elegans Hypothetical p... 25 7.2
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 25 7.2
Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical pr... 25 9.6
U61958-3|AAB03180.2| 149|Caenorhabditis elegans Hypothetical pr... 25 9.6
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 30.3 bits (65), Expect = 0.19
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -1
Query: 157 PPAHEITSAPHVTPITTTSLAQTRPSAALHDTPYHP 50
PPA + T P TP TTT+ T + AL Y P
Sbjct: 277 PPAAQTTPQPPCTPRTTTTTTTTTTTTALPPCVYTP 312
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 29.5 bits (63), Expect = 0.34
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = -1
Query: 160 PPPAHEITSAPHVTPITTTS---LAQTRPSAALHDTPYHPEQTVRRH 29
P PA TSAP V P+T S QT P+ + Y ++ H
Sbjct: 324 PAPAPAATSAPFVEPVTEESKPGYEQTAPAVETKEESYDEQEAEETH 370
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 28.3 bits (60), Expect = 0.78
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -1
Query: 157 PPAHEITSAPHVTPITTTSLAQTRPSAALHDTPYHP 50
PPA + T P TP TTT+ T + L Y P
Sbjct: 200 PPAVQTTPQPPCTPRTTTTTTTTTTTTTLPPCVYTP 235
>Z70753-2|CAA94760.1| 275|Caenorhabditis elegans Hypothetical
protein F40F9.3 protein.
Length = 275
Score = 27.9 bits (59), Expect = 1.0
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 160 PPPAHEITSAPHVTPITTTSLAQTRPSAALHDTPYHPEQ 44
PPPA + TSA + AQ + +A+ P PE+
Sbjct: 19 PPPAPKTTSAERAPEKVSAEKAQEQEKSAMGSVPIPPER 57
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = -1
Query: 157 PPAHEITSAPHVTPITTTSLAQTRPSAALHDTPYHPEQTVRRHRSRASCRTS 2
PP +S P TTT++ T P++ T P+ T S ++ T+
Sbjct: 584 PPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTT 635
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = -1
Query: 157 PPAHEITSAPHVTPITTTSLAQTRPSAALHDTPYHPEQTVRRHRSRASCRTS 2
PP +S P TTT++ T P++ T P+ T S ++ T+
Sbjct: 584 PPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTT 635
>Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical
protein T24D1.3 protein.
Length = 349
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -1
Query: 154 PAHEITSAPHVTPITTTSLAQTRPSAALHDTPYHPEQTV 38
PA++I +AP+ P ++ Q S+ +P PE T+
Sbjct: 116 PANQIPAAPNTQPEVPPTVQQPESSSQERASPTSPEITI 154
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
protein T23F1.5 protein.
Length = 1262
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1
Query: 154 PAHEITSAPHVTPITTTSLAQTRPSAALHDTPYHP 50
P H TS TP TTS TRP+A++ P P
Sbjct: 671 PLHPETSQS--TPTPTTSARSTRPTASVTRRPEFP 703
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 160 PPPAHEITSAPHVTPITTTSLAQTRP 83
PP TSAPH +P TSL +P
Sbjct: 175 PPQQPPSTSAPHSSPNNRTSLYNPQP 200
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -1
Query: 139 TSAPHVTPITTTSLAQTRPSAALHDTPYHPEQTVRRHR 26
T+ TP TTT+ P+ T +P Q V++ +
Sbjct: 327 TTTQRTTPYTTTTTTTAAPTTTTMKTIKYPIQEVKKEK 364
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -1
Query: 139 TSAPHVTPITTTSLAQTRPSAALHDTPYHPEQTVRRHR 26
T+ TP TTT+ P+ T +P Q V++ +
Sbjct: 327 TTTQRTTPYTTTTTTTAAPTTTTMKTIKYPIQEVKKEK 364
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical
protein F40H6.5 protein.
Length = 1288
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 151 AHEITSAPHVTPITTTSLAQTRPSAALHDT 62
+H T P TP+ T S +Q+ PSA L T
Sbjct: 906 SHTTTVEPS-TPLETASTSQSTPSATLTST 934
>U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform a protein.
Length = 1004
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 152 RPRDHVRAPRXXXXXHQLGADSPQRRPAR 66
R +HVRAPR Q+ D R P+R
Sbjct: 749 RSGNHVRAPRERIHDIQIQRDYGDRAPSR 777
>U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform c protein.
Length = 1099
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 152 RPRDHVRAPRXXXXXHQLGADSPQRRPAR 66
R +HVRAPR Q+ D R P+R
Sbjct: 844 RSGNHVRAPRERIHDIQIQRDYGDRAPSR 872
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 92 DSPQRRPARHTISP*TDGSATQK 24
D P RR A++ I P DGS K
Sbjct: 666 DEPARRQAKYVIQPSPDGSHRPK 688
>U00048-11|AAB53833.1| 995|Caenorhabditis elegans Hypothetical
protein C05D11.1 protein.
Length = 995
Score = 25.0 bits (52), Expect = 7.2
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 154 PAHEITS-APHVTPITTTSLAQTRPSAALHDTP 59
P +TS +P +TP +T LAQ A LH+ P
Sbjct: 522 PVQSLTSNSPSLTPQQSTFLAQFPFHANLHNCP 554
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -1
Query: 136 SAPHVTPITTTSLAQTRPSAALHDTPYHPE 47
S P +T IT QT L + YHPE
Sbjct: 81 SPPAITMITPNGRFQTNTRLCLSISDYHPE 110
>Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical
protein C03E10.5 protein.
Length = 623
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 160 PPPAHEITSAPHVTPITTTSLAQTRPSAALHD 65
PPP+ + T+ T TTS++ T+ A D
Sbjct: 411 PPPSTQSTTTMKSTTTATTSMSTTKKVCAKSD 442
>U61958-3|AAB03180.2| 149|Caenorhabditis elegans Hypothetical
protein C25A8.2 protein.
Length = 149
Score = 24.6 bits (51), Expect = 9.6
Identities = 13/53 (24%), Positives = 23/53 (43%)
Frame = -1
Query: 160 PPPAHEITSAPHVTPITTTSLAQTRPSAALHDTPYHPEQTVRRHRSRASCRTS 2
P A E +A + P+ T LA P+A + PE+ + + + + S
Sbjct: 53 PGAATEAGAASSLAPVDATKLATPVPAAPKKEEAPPPEEPKKEEKPKEKSKKS 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,399,513
Number of Sequences: 27780
Number of extensions: 47831
Number of successful extensions: 251
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 251
length of database: 12,740,198
effective HSP length: 33
effective length of database: 11,823,458
effective search space used: 224645702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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