Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_B21
         (176 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF588503-1|ABQ96738.1|  169|Anopheles gambiae transposase protein.     21   7.0  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    21   7.0  

>EF588503-1|ABQ96738.1|  169|Anopheles gambiae transposase protein.
          Length = 169

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 175 CYDCRRQSLVLYRKSPNQV 119
           C +C   +LV+Y  +PN +
Sbjct: 117 CKECLPFNLVVYTLNPNYI 135


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 172  YDCRRQSLVLYRKSPNQV 119
            Y+C +Q   + RKSP +V
Sbjct: 1294 YECIKQGQQVVRKSPLRV 1311


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.139    0.471 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,160
Number of Sequences: 2352
Number of extensions: 1514
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 563,979
effective HSP length: 37
effective length of database: 476,955
effective search space used: 10016055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.0 bits)