Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_B20
(367 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 146 4e-36
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 146 4e-36
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 146 4e-36
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 33 0.083
U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical pr... 30 0.58
Z83116-8|CAB05567.1| 397|Caenorhabditis elegans Hypothetical pr... 28 1.8
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 1.8
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 1.8
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 1.8
Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical p... 27 4.1
U97003-7|AAB52274.1| 357|Caenorhabditis elegans Hypothetical pr... 27 4.1
AC024826-6|AAF60801.1| 379|Caenorhabditis elegans Hypothetical ... 27 4.1
AC024746-12|AAF60401.1| 142|Caenorhabditis elegans Hypothetical... 27 5.4
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 26 7.2
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 26 7.2
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 26 7.2
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 26 7.2
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 26 9.5
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 146 bits (354), Expect = 4e-36
Identities = 72/116 (62%), Positives = 83/116 (71%)
Frame = +1
Query: 19 NITTEVKSVEMPRGSTRSLYPVTMLVSTSKTYLVQRELRRGYVAGDSKNNPPRGAADFTA 198
N+TTEVKSVEM S P + K V +++RRG V DSK +P + A F A
Sbjct: 250 NVTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSV-KDIRRGSVCSDSKQDPAKEARTFHA 308
Query: 199 QVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGD 366
QVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGD
Sbjct: 309 QVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGD 364
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 146 bits (354), Expect = 4e-36
Identities = 72/116 (62%), Positives = 83/116 (71%)
Frame = +1
Query: 19 NITTEVKSVEMPRGSTRSLYPVTMLVSTSKTYLVQRELRRGYVAGDSKNNPPRGAADFTA 198
N+TTEVKSVEM S P + K V +++RRG V DSK +P + A F A
Sbjct: 284 NVTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSV-KDIRRGSVCSDSKQDPAKEARTFHA 342
Query: 199 QVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGD 366
QVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGD
Sbjct: 343 QVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGD 398
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 146 bits (354), Expect = 4e-36
Identities = 72/116 (62%), Positives = 83/116 (71%)
Frame = +1
Query: 19 NITTEVKSVEMPRGSTRSLYPVTMLVSTSKTYLVQRELRRGYVAGDSKNNPPRGAADFTA 198
N+TTEVKSVEM S P + K V +++RRG V DSK +P + A F A
Sbjct: 284 NVTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSV-KDIRRGSVCSDSKQDPAKEARTFHA 342
Query: 199 QVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGD 366
QVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGD
Sbjct: 343 QVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGD 398
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 32.7 bits (71), Expect = 0.083
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +1
Query: 121 QRELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIK 300
+ EL+ G++ + G F A+V+VL H I++GY+ VL +A +
Sbjct: 409 ENELQGGFIICSPDSLAKTGRV-FDAEVLVLEHRSIIASGYSCVLHIQSAVEEVTVKGVI 467
Query: 301 EKVDRRTGK 327
+D++TG+
Sbjct: 468 ATIDKKTGE 476
>U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical
protein C10G11.6 protein.
Length = 425
Score = 29.9 bits (64), Expect = 0.58
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 255 GLPHSPHSLQICRNQRESRPSYW*INR 335
GL HSPHS N R S P ++ INR
Sbjct: 47 GLVHSPHSSFTTENLRSSDPMFFDINR 73
>Z83116-8|CAB05567.1| 397|Caenorhabditis elegans Hypothetical
protein M01B2.10 protein.
Length = 397
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -3
Query: 119 TRYVFDVETNIVTGYKLLVEPRGISTDLTSVVML 18
T +++V+T I G K LVE RG+S + ++V +
Sbjct: 135 TLTIYEVQTLIFPGEKYLVELRGVSLENNTLVAM 168
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 1.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 253 LDCHTAHIACKFAEIKEKVDRRTGKSTE 336
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 1.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 253 LDCHTAHIACKFAEIKEKVDRRTGKSTE 336
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 1.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 253 LDCHTAHIACKFAEIKEKVDRRTGKSTE 336
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 27.1 bits (57), Expect = 4.1
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +1
Query: 160 KNNPPRGAAD-FTAQVIVLNHP 222
K NPP+GAAD F +V+ L+ P
Sbjct: 279 KANPPQGAADKFHVKVVTLHEP 300
>Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 27.1 bits (57), Expect = 4.1
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +1
Query: 160 KNNPPRGAAD-FTAQVIVLNHP 222
K NPP+GAAD F +V+ L+ P
Sbjct: 279 KANPPQGAADKFHVKVVTLHEP 300
>U97003-7|AAB52274.1| 357|Caenorhabditis elegans Hypothetical
protein F47C10.4 protein.
Length = 357
Score = 27.1 bits (57), Expect = 4.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 170 HPGELQTSQRKSLC*ITQVKYQTDTHLYWI 259
H G + ++ SLC +T Y+ +LYWI
Sbjct: 311 HNGSSRFTELLSLCTVTNKYYEDVQYLYWI 340
>AC024826-6|AAF60801.1| 379|Caenorhabditis elegans Hypothetical
protein Y55F3AM.9 protein.
Length = 379
Score = 27.1 bits (57), Expect = 4.1
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 289 AEIKEKVDRRTGKSTEDNPKS 351
AEI + +D+ GKSTE++P++
Sbjct: 27 AEILQSLDKSLGKSTEESPEA 47
>AC024746-12|AAF60401.1| 142|Caenorhabditis elegans Hypothetical
protein Y110A2AL.1 protein.
Length = 142
Score = 26.6 bits (56), Expect = 5.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 133 RRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQI 231
RR Y D P+GA DF AQ++ PG I
Sbjct: 64 RRHYF--DLHGMTPQGAVDFVAQIVEGRRPGYI 94
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 26.2 bits (55), Expect = 7.2
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 253 LDCHTAHIACKFAEIKEKVDRRTGKSTE 336
L C ++C+ + +K+K + T KS E
Sbjct: 527 LQCQNEKLSCELSSLKDKHEEATSKSIE 554
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 26.2 bits (55), Expect = 7.2
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 253 LDCHTAHIACKFAEIKEKVDRRTGKSTE 336
L C ++C+ + +K+K + T KS E
Sbjct: 527 LQCQNEKLSCELSSLKDKHEEATSKSIE 554
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 199 QVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKE 303
Q+++LNHP QI +L A C+F ++E
Sbjct: 1375 QILLLNHPNQIGKSTCYILMSDVAKY-CRFLVVEE 1408
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 26.2 bits (55), Expect = 7.2
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 253 LDCHTAHIACKFAEIKEKVDRRTGKSTE 336
L C ++C+ + +K+K + T KS E
Sbjct: 525 LQCQNEKLSCELSSLKDKHEEATSKSIE 552
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 58 GSTRSLYPVTMLVSTSKTYLVQRELRRGYVAGDSKNNPPR 177
GSTR L+P+ + + V REL+ GD K + R
Sbjct: 91 GSTRGLWPMPLQSEEERIREVLRELKSRKEGGDVKEDIER 130
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 58 GSTRSLYPVTMLVSTSKTYLVQRELRRGYVAGDSKNNPPR 177
GSTR L+P+ + + V REL+ GD K + R
Sbjct: 91 GSTRGLWPMPLQSEEERIREVLRELKSRKEGGDVKEDIER 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.130 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,192,385
Number of Sequences: 27780
Number of extensions: 198688
Number of successful extensions: 410
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 404
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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