Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_B20
(367 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 180 4e-48
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 180 5e-48
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 171 2e-45
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 45 2e-07
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 0.65
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 2.6
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 3.4
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 21 4.6
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 4.6
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 6.0
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 6.0
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 6.0
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 6.0
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 6.0
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 20 8.0
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 20 8.0
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 20 8.0
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 20 8.0
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 20 8.0
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 180 bits (439), Expect = 4e-48
Identities = 89/117 (76%), Positives = 95/117 (81%)
Frame = +1
Query: 16 ANITTEVKSVEMPRGSTRSLYPVTMLVSTSKTYLVQRELRRGYVAGDSKNNPPRGAADFT 195
A +TTEVKSVEM + P + K V +ELRRGYVAGDSKN PPRGAADFT
Sbjct: 283 AALTTEVKSVEMHHEALTEALPGDNVGFNVKNISV-KELRRGYVAGDSKNQPPRGAADFT 341
Query: 196 AQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGD 366
AQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE+NPKSIKSGD
Sbjct: 342 AQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGD 398
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 180 bits (438), Expect = 5e-48
Identities = 87/117 (74%), Positives = 96/117 (82%)
Frame = +1
Query: 16 ANITTEVKSVEMPRGSTRSLYPVTMLVSTSKTYLVQRELRRGYVAGDSKNNPPRGAADFT 195
A +TTEVKSVEM + + P + K V +ELRRGYVAGDSKNNPP+GAADFT
Sbjct: 283 AGLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSV-KELRRGYVAGDSKNNPPKGAADFT 341
Query: 196 AQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGD 366
AQVIVLNHPGQISNGYTPVLDCHTAHIACKFA+IKEK DRR GK+TE+NPKSIKSGD
Sbjct: 342 AQVIVLNHPGQISNGYTPVLDCHTAHIACKFADIKEKCDRRNGKTTEENPKSIKSGD 398
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 171 bits (416), Expect = 2e-45
Identities = 84/110 (76%), Positives = 89/110 (80%)
Frame = +1
Query: 37 KSVEMPRGSTRSLYPVTMLVSTSKTYLVQRELRRGYVAGDSKNNPPRGAADFTAQVIVLN 216
KSVEM + P + K V +ELRRGYVAGDSKN PPRGAADFTAQVIVLN
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISV-KELRRGYVAGDSKNQPPRGAADFTAQVIVLN 59
Query: 217 HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGD 366
HPGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE+NPKSIKSGD
Sbjct: 60 HPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGD 109
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 45.2 bits (102), Expect = 2e-07
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = +1
Query: 16 ANITTEVKSVEMPRGSTRSLYPVTMLVSTSKTYLVQRELRRGYVAGDSKN 165
A +TTEVKSVEM + + P + K V +ELRRGYVAGDSKN
Sbjct: 226 AGLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSV-KELRRGYVAGDSKN 274
Score = 34.3 bits (75), Expect = 5e-04
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 66 KKLVPGDNVGFNVKNVS 116
++ VPGDNVGFNVKNVS
Sbjct: 243 QEAVPGDNVGFNVKNVS 259
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 0.65
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 162 KQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHSP 272
K TQ S + + + P S +R HT G+P P
Sbjct: 1048 KTYTQYSVVVQAFNKVGSGPMSEERRQHTAEGVPEQP 1084
Score = 22.2 bits (45), Expect = 2.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -3
Query: 89 IVTGYKLLVEPRG 51
++TGYK++V P G
Sbjct: 1113 VITGYKVIVIPSG 1125
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 2.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +2
Query: 305 KSTVVLVNQQRTTLNPLNLVM 367
KST V +R T+NP ++++
Sbjct: 142 KSTTTTVEVKRDTINPEDVIL 162
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 3.4
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 124 RELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 225
R+LR ++A + + P+G Q++VLN G
Sbjct: 285 RDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 21.0 bits (42), Expect = 4.6
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -1
Query: 331 LIYQYDGRLSL*FRQI--CRLCGLCGN 257
L+ DGR+S + C +CG CG+
Sbjct: 57 LLKDADGRVSCPVLRAYTCPICGACGD 83
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.0 bits (42), Expect = 4.6
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = -2
Query: 165 VFRISCNVTTAQFPLNQIR 109
+FR SC++ FP ++ R
Sbjct: 126 IFRSSCDIDVEFFPFDEQR 144
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 6.0
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2
Query: 305 KSTVVLVNQQRTTLNPLNLVM 367
KST+ V +R +NP ++++
Sbjct: 131 KSTITTVEVKRDIINPEDVIL 151
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 6.0
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2
Query: 305 KSTVVLVNQQRTTLNPLNLVM 367
KST+ V +R +NP ++++
Sbjct: 142 KSTITTVEVKRDIINPEDVIL 162
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 20.6 bits (41), Expect = 6.0
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = -2
Query: 165 VFRISCNVTTAQFPLNQ 115
+F+ SC + FP +Q
Sbjct: 140 IFKSSCEIDVRYFPFDQ 156
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.6 bits (41), Expect = 6.0
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +3
Query: 177 GSCRLHSASHCAKSPRSNIKRIHTCIGLPHSPHSLQICRNQRESR 311
G LHSA S SN+ + T + P +Q + ++S+
Sbjct: 938 GHSVLHSAQSVVASSASNVTNVTTNLTTILPPVKVQSQQQSQQSQ 982
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 20.6 bits (41), Expect = 6.0
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 165 QPTQGSCRLHSASHCAKSPRS 227
Q TQ LH S A+SP S
Sbjct: 665 QHTQSQLHLHLTSPPARSPSS 685
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 20.2 bits (40), Expect = 8.0
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 77 TR*QCWFQRQKRIWFKGN 130
T+ + WFQ ++ W K N
Sbjct: 50 TQVKIWFQNRRTKWKKQN 67
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 8.0
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 298 KEKVDRRTGKSTEDNPKSIKS 360
KE+ RT + T PK I S
Sbjct: 64 KERSQDRTERETSKEPKIISS 84
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 8.0
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 298 KEKVDRRTGKSTEDNPKSIKS 360
KE+ RT + T PK I S
Sbjct: 64 KERSQDRTERETSKEPKIISS 84
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 8.0
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2
Query: 305 KSTVVLVNQQRTTLNPLNLVM 367
KST +R T+NP ++++
Sbjct: 142 KSTTTTAEVKRDTINPEDVIL 162
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 20.2 bits (40), Expect = 8.0
Identities = 13/55 (23%), Positives = 22/55 (40%)
Frame = +3
Query: 153 RFEKQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHSPHSLQICRNQRESRPS 317
+ K P S ++ S S N+ R G+P ++ RNQ++ S
Sbjct: 1261 QMSKVPRDVSEGIYDGSGANGSFLDNLIRSSLETGIPRDQRAMTEARNQQQQASS 1315
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.314 0.130 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,840
Number of Sequences: 438
Number of extensions: 2560
Number of successful extensions: 30
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8680350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.6 bits)
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