Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_B19
         (236 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   0.86 
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    22   3.5  
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       21   4.6  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    21   4.6  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    21   8.0  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          21   8.0  

>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 23.8 bits (49), Expect = 0.86
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 157  VAAPIPELPPVTRATLPLKAITRMLLRK 74
            V+ P+P +PP +R   P    T M  R+
Sbjct: 1102 VSPPVPPIPPRSRRLPPSPRTTEMRRRR 1129


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +2

Query: 83  QHSCY-GFQRQSCSCNRRELRDRR 151
           Q  CY G+  ++C CN +  ++RR
Sbjct: 491 QCQCYVGWIGKTCECNLQNSQNRR 514


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 184 APSLVNCMAVAAPIPELPPVTRAT 113
           AP+L    A  AP+   PP TR T
Sbjct: 49  APALTQ--AAPAPVVSQPPATRDT 70


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 122 CNRRELRDRRRYCHTVY 172
           C R  L +RRR C+  Y
Sbjct: 202 CCRLRLLERRRQCYRCY 218


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 228 LFKSLLHFCRKSL 190
           ++K+LLH CR  L
Sbjct: 634 IYKNLLHACRSYL 646


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 49  PRFDWRLQI 75
           PR DWR++I
Sbjct: 238 PRLDWRIKI 246


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,110
Number of Sequences: 2352
Number of extensions: 3038
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 52
effective length of database: 441,675
effective search space used: 11483550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)