Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_B17
(284 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces po... 74 5e-15
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 72 1e-14
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 31 0.043
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 0.40
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 0.69
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 2.1
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 25 2.8
SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha sub... 24 3.7
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 24 3.7
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 24 4.9
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 24 4.9
SPAC644.11c |||pyruvate dehydrogenase |Schizosaccharomyces pombe... 23 6.5
SPBC29A3.07c |||U2 snRNP-associated protein Sf3b14 homolog |Schi... 23 6.5
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 23 6.5
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 23 6.5
SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Sc... 23 8.5
SPBC651.12c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 23 8.5
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 23 8.5
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 23 8.5
>SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 73.7 bits (173), Expect = 5e-15
Identities = 37/59 (62%), Positives = 44/59 (74%)
Frame = +1
Query: 106 SVDKEELVQRAKLAEQAERYDDMAGAMKEVMETGVELSNEERNLLSVAYKNVVGARRSS 282
+ +E+ V AKLAEQAERY+ M MK V T EL+ EERNLLSVAYKNV+GARR+S
Sbjct: 3 TTSREDAVYLAKLAEQAERYEGMVENMKSVASTDQELTVEERNLLSVAYKNVIGARRAS 61
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 72.1 bits (169), Expect = 1e-14
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +1
Query: 103 MSVDKEELVQRAKLAEQAERYDDMAGAMKEVMETGVELSNEERNLLSVAYKNVVGARRSS 282
MS +E V AKLAEQAERY++M MK+V + +LS EERNLLSVAYKN++GARR+S
Sbjct: 1 MSNSRENSVYLAKLAEQAERYEEMVENMKKVACSNDKLSVEERNLLSVAYKNIIGARRAS 60
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 30.7 bits (66), Expect = 0.043
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = -1
Query: 230 LSSLLSSTPVSITSFIAPAMSSY-RSACSANLARCTSSSLS 111
+SS SS+P+S +SF +PA SS+ S S++ + +SSS S
Sbjct: 57 ISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSSAS 97
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.5 bits (58), Expect = 0.40
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -1
Query: 230 LSSLLS-STPVSITSFIAPAMSSYRSACSANLARCTSSSLST 108
LSS S ST + +TS +APA++S S S+ + T S+ S+
Sbjct: 885 LSSTTSLSTSIPVTSSVAPAVTSTGSETSSVVGSGTDSATSS 926
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 26.6 bits (56), Expect = 0.69
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 248 ATERRFLSSLLSSTPVSITSFIAPAMSSYRSACSAN 141
+TE +SL SST + TS+I A SSY A +++
Sbjct: 560 STEALSSNSLSSSTSSASTSYIPSASSSYEVASNSS 595
Score = 24.2 bits (50), Expect = 3.7
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -1
Query: 227 SSLLSSTPVSITSFIAPAMSS-YRSACSANLARCTSSSLST 108
+SL SST TS+I A SS Y S+ A + SSS S+
Sbjct: 535 NSLSSSTSSVSTSYIPNASSSVYASSTEALSSNSLSSSTSS 575
Score = 23.8 bits (49), Expect = 4.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 227 SSLLSSTPVSITSFIAPAMSSYRSACSANLARCTSSS 117
SSL SST +TS + SS RS ++ A +S+S
Sbjct: 983 SSLSSSTTSGLTSSSSTIPSSTRSESNSESASTSSAS 1019
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.0 bits (52), Expect = 2.1
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -1
Query: 227 SSLLSSTPVSITSFIAPAMSSYRSACSANLARCTSSSLST 108
SS SS+P S +S I+ + SS S S + +SSS S+
Sbjct: 276 SSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSS 315
Score = 23.4 bits (48), Expect = 6.5
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -1
Query: 227 SSLLSSTPVSITSFIAPAMSSYRSACSANLARCTSSSLST 108
SS SS+P S +S I+ + SS S+ S+ L+ + SS S+
Sbjct: 293 SSSSSSSPTSTSSTISSSSSS-SSSFSSTLSSSSMSSSSS 331
Score = 23.4 bits (48), Expect = 6.5
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = -1
Query: 227 SSLLSSTPVSITSFIAPAMSSYRSACSANLARCTSSSLST 108
SS LSS+ +S +S + + +S S S++ + +SSS S+
Sbjct: 318 SSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSS 357
Score = 23.0 bits (47), Expect = 8.5
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -1
Query: 227 SSLLSSTPVSITSFI---APAMSSYRSACSANLARCTSSSLSTDIV 99
S+ S+ P S +S + +SS S S++ + TSSSLST +
Sbjct: 195 STFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSI 240
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 24.6 bits (51), Expect = 2.8
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +1
Query: 115 KEELVQRAKLAEQAERYDDMAGAMKEVMETGVELSNEERNLLSVAYKNV 261
KE L +L E + D + A + + V NLL + YKNV
Sbjct: 608 KEHLYSFLQLVEPSFAKSDSSNATESQISESVRKGISIFNLLFIVYKNV 656
>SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha
subunit Pda1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 24.2 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 166 DDMAGAMKEVMETGVELSNEERNL 237
D + G K +ME GV +NE +N+
Sbjct: 332 DPIEGLKKHIMEWGVANANELKNI 355
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 24.2 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 239 RRFLSSLLSSTPVSITSFIAPAMS 168
RR S+TP+S+++ IAP++S
Sbjct: 255 RRLRHKRHSTTPISLSNSIAPSLS 278
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 23.8 bits (49), Expect = 4.9
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -1
Query: 230 LSSLLSSTPVSITSFIAPAMSSYRSACSANLARCTSSSLST 108
L++ +STP ++T I P+ +SY S+ + + SSSL T
Sbjct: 570 LTATSTSTP-ALTHSITPSNTSYTSSLIPSSSTDYSSSLIT 609
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 23.8 bits (49), Expect = 4.9
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -1
Query: 227 SSLLSSTPVSITSFIAPAMSSYRSACSANLARCTSSSLST 108
SS SSTPVS+TS + SS S+ + T S+++T
Sbjct: 271 SSFTSSTPVSLTS---SSTSSSGSSQDSTTIDSTPSTIAT 307
>SPAC644.11c |||pyruvate dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 23.4 bits (48), Expect = 6.5
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 59 SNKGISEINIFHRPRCPSIRRN*YNAPSWLSRLND 163
S + I E+ P+C +NAP W S L D
Sbjct: 85 SMEEIIELKGVELPKCLPKHARYHNAPKWRSSLMD 119
>SPBC29A3.07c |||U2 snRNP-associated protein Sf3b14 homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 137
Score = 23.4 bits (48), Expect = 6.5
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +1
Query: 88 LPSSTMSVDKEEL--VQRAKLAEQAERYDDMAGAMKEVMETGVELSNEERNLLSVAYKNV 261
+P ST++ + + ++ AE D+ G V + + + + R V Y+NV
Sbjct: 1 MPPSTVNQEVNSILFIKNLSFKITAEEMYDLFGRYGPVRQIRLGNTVQTRGTAFVVYENV 60
Query: 262 VGARRS 279
ARR+
Sbjct: 61 QDARRA 66
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 23.4 bits (48), Expect = 6.5
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -1
Query: 272 RAPTTFL*ATERRFLSSLLSSTPVSITSFIAPAMSSYRSACSAN 141
R TTF +T +S+ SST S TSF + + S Y + +++
Sbjct: 646 RTSTTFTSSTS---ISTSSSSTATSSTSFASESSSFYSNVTTSS 686
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 23.4 bits (48), Expect = 6.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 227 SSLLSSTPVSITSFIAPAMSSYRSACSANLARCTSSSLST 108
SSL+SST S +S SS S+ S++ + + SS S+
Sbjct: 126 SSLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSSSSS 165
>SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein
Ubr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1958
Score = 23.0 bits (47), Expect = 8.5
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 246 NGKKVSFFVAELDAGFHHFLHRARHVIISF 157
N K + + +A FHH LH ++SF
Sbjct: 692 NSKLIEYDIALQPVSFHHPLHWLLVYLLSF 721
>SPBC651.12c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 23.0 bits (47), Expect = 8.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 209 TPVSITSFIAPAMSSYRSACSANLARCT 126
TP S SF++ ++SS S+ +L +CT
Sbjct: 160 TPPSKPSFLSSSVSSPASSKQKSLFQCT 187
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 23.0 bits (47), Expect = 8.5
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -1
Query: 227 SSLLSSTP--VSITSFIAPAMSSYRSACSANLARCTSSSLST 108
SS SS+P S T+ +P+ SS S+ S++ + +SSS S+
Sbjct: 137 SSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSS 178
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 23.0 bits (47), Expect = 8.5
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -1
Query: 269 APTTFL*ATERRFLSSLLSSTPVSITSFIAPAMSSYRSACSANLARCTSSSLST 108
AP+ T + + SSTP S +S + + SS S S++ +SSS S+
Sbjct: 133 APSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSS 186
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,194,767
Number of Sequences: 5004
Number of extensions: 20907
Number of successful extensions: 78
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 65671360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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