Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_B17
(284 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 101 1e-22
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 101 1e-22
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 100 1e-22
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 100 1e-22
AC084155-9|AAO25978.1| 423|Caenorhabditis elegans Hypothetical ... 29 0.71
AC084155-8|AAG23358.2| 499|Caenorhabditis elegans Hypothetical ... 29 0.71
Z96048-1|CAB09419.1| 351|Caenorhabditis elegans Hypothetical pr... 27 2.2
Z83106-4|CAB05496.1| 343|Caenorhabditis elegans Hypothetical pr... 27 2.9
Z68336-5|CAA92740.3| 442|Caenorhabditis elegans Hypothetical pr... 26 3.8
Z99281-19|CAD56260.1| 317|Caenorhabditis elegans Hypothetical p... 26 5.0
Z81128-10|CAB03395.3| 467|Caenorhabditis elegans Hypothetical p... 26 5.0
Z81033-3|CAD36479.1| 467|Caenorhabditis elegans Hypothetical pr... 26 5.0
AL023824-1|CAD36497.1| 467|Caenorhabditis elegans Hypothetical ... 26 5.0
AF487547-1|AAL93258.1| 467|Caenorhabditis elegans ARID DNA bind... 26 5.0
Z81062-5|CAB02944.1| 143|Caenorhabditis elegans Hypothetical pr... 25 6.6
U56966-1|AAA98717.1| 208|Caenorhabditis elegans Ets class trans... 25 6.6
U42436-4|AAF99896.2| 297|Caenorhabditis elegans Hypothetical pr... 25 6.6
Z82051-8|CAB04814.1| 349|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z82051-5|CAB04813.1| 216|Caenorhabditis elegans Hypothetical pr... 25 8.7
AF016672-8|AAB66117.4| 998|Caenorhabditis elegans Jnk interacti... 25 8.7
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 101 bits (241), Expect = 1e-22
Identities = 51/60 (85%), Positives = 53/60 (88%)
Frame = +1
Query: 103 MSVDKEELVQRAKLAEQAERYDDMAGAMKEVMETGVELSNEERNLLSVAYKNVVGARRSS 282
MS KEELV RAKLAEQAERYDDMA +MK+V E G ELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSS 60
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 101 bits (241), Expect = 1e-22
Identities = 51/60 (85%), Positives = 53/60 (88%)
Frame = +1
Query: 103 MSVDKEELVQRAKLAEQAERYDDMAGAMKEVMETGVELSNEERNLLSVAYKNVVGARRSS 282
MS KEELV RAKLAEQAERYDDMA +MK+V E G ELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSS 60
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 100 bits (240), Expect = 1e-22
Identities = 52/60 (86%), Positives = 53/60 (88%)
Frame = +1
Query: 103 MSVDKEELVQRAKLAEQAERYDDMAGAMKEVMETGVELSNEERNLLSVAYKNVVGARRSS 282
MS EELVQRAKLAEQAERYDDMA AMK+V E G ELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSS 60
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 100 bits (240), Expect = 1e-22
Identities = 52/60 (86%), Positives = 53/60 (88%)
Frame = +1
Query: 103 MSVDKEELVQRAKLAEQAERYDDMAGAMKEVMETGVELSNEERNLLSVAYKNVVGARRSS 282
MS EELVQRAKLAEQAERYDDMA AMK+V E G ELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSS 60
>AC084155-9|AAO25978.1| 423|Caenorhabditis elegans Hypothetical
protein Y45G5AM.9b protein.
Length = 423
Score = 28.7 bits (61), Expect = 0.71
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -1
Query: 227 SSLLSSTPVSITSFIAPAMSSYRSACSANLARCTSSSLSTDIVD 96
S+LL TP+ T+ + SS+ S+ +A + +SSS + ++D
Sbjct: 328 SNLLLPTPIQATTTSSSTESSHDSSATATNPKTSSSSPPSSVID 371
>AC084155-8|AAG23358.2| 499|Caenorhabditis elegans Hypothetical
protein Y45G5AM.9a protein.
Length = 499
Score = 28.7 bits (61), Expect = 0.71
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -1
Query: 227 SSLLSSTPVSITSFIAPAMSSYRSACSANLARCTSSSLSTDIVD 96
S+LL TP+ T+ + SS+ S+ +A + +SSS + ++D
Sbjct: 328 SNLLLPTPIQATTTSSSTESSHDSSATATNPKTSSSSPPSSVID 371
>Z96048-1|CAB09419.1| 351|Caenorhabditis elegans Hypothetical
protein F57A10.1 protein.
Length = 351
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -3
Query: 270 GADHIFISNGKKVSFFVAELDAGFHHFLHRARHVIISFSLLSQLG 136
G+ + N + + F A + FH FLH +I FSL LG
Sbjct: 44 GSYKYLLVNFQLLGFIFASFEFLFHTFLHTYNASLIYFSLSRPLG 88
>Z83106-4|CAB05496.1| 343|Caenorhabditis elegans Hypothetical
protein F22B8.5 protein.
Length = 343
Score = 26.6 bits (56), Expect = 2.9
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 270 GADHIFISNGKKVSFFVAELDAGFHHFLHRARHVIISFSLLSQLG 136
G+ + N + V F A + FH FLH +I FSL LG
Sbjct: 45 GSYKYLLVNFQLVGFCFASCEYLFHTFLHLYNASLIYFSLSHPLG 89
>Z68336-5|CAA92740.3| 442|Caenorhabditis elegans Hypothetical
protein F22B3.8 protein.
Length = 442
Score = 26.2 bits (55), Expect = 3.8
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 106 SVDKEELVQRAKLAEQAERYDDMAGAMKEVM-ETGVELSNEERNLLS 243
SVD++E + +A + + DD A+ EVM E ++L +N+L+
Sbjct: 181 SVDQKEFHKWCDVAVKTVKNDDSRAALLEVMHEARLQLQLRHKNVLA 227
>Z99281-19|CAD56260.1| 317|Caenorhabditis elegans Hypothetical
protein Y57G11C.38 protein.
Length = 317
Score = 25.8 bits (54), Expect = 5.0
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -1
Query: 227 SSLLSSTPVSITSFIAPAMSSYRSACSANLARCTSSSLSTDIVDDG 90
SS LSS+ +I+ A SS +S CS N C S + S + G
Sbjct: 60 SSTLSSS-ANISCSAASTSSSIKSTCSCNSDFCNSLAKSKSALSVG 104
>Z81128-10|CAB03395.3| 467|Caenorhabditis elegans Hypothetical
protein T23D8.8 protein.
Length = 467
Score = 25.8 bits (54), Expect = 5.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 195 DGNRRRAQQRRKKPSF 242
DGNRR A RR PSF
Sbjct: 286 DGNRREAPGRRTAPSF 301
>Z81033-3|CAD36479.1| 467|Caenorhabditis elegans Hypothetical
protein T23D8.8 protein.
Length = 467
Score = 25.8 bits (54), Expect = 5.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 195 DGNRRRAQQRRKKPSF 242
DGNRR A RR PSF
Sbjct: 286 DGNRREAPGRRTAPSF 301
>AL023824-1|CAD36497.1| 467|Caenorhabditis elegans Hypothetical
protein T23D8.8 protein.
Length = 467
Score = 25.8 bits (54), Expect = 5.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 195 DGNRRRAQQRRKKPSF 242
DGNRR A RR PSF
Sbjct: 286 DGNRREAPGRRTAPSF 301
>AF487547-1|AAL93258.1| 467|Caenorhabditis elegans ARID DNA binding
protein CFI-1 protein.
Length = 467
Score = 25.8 bits (54), Expect = 5.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 195 DGNRRRAQQRRKKPSF 242
DGNRR A RR PSF
Sbjct: 286 DGNRREAPGRRTAPSF 301
>Z81062-5|CAB02944.1| 143|Caenorhabditis elegans Hypothetical
protein F15A4.6 protein.
Length = 143
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 215 SSTPVSITSFIAPAMSSYRSACSANLARCTSS 120
+ TP + + P S+ RS C+AN +RC S
Sbjct: 96 TGTPSTCADLVNP--STGRSECAANKSRCNDS 125
>U56966-1|AAA98717.1| 208|Caenorhabditis elegans Ets class
transcription factorprotein 5 protein.
Length = 208
Score = 25.4 bits (53), Expect = 6.6
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -1
Query: 206 PVSITSFIAPAMSSYRSACSANLARCTSSSLSTDIV 99
P+ +TS ++ +MSSY S S+ TSS+ S I+
Sbjct: 154 PIGVTSRLSTSMSSYHSILSS-----TSSTSSNQII 184
>U42436-4|AAF99896.2| 297|Caenorhabditis elegans Hypothetical
protein C49H3.9 protein.
Length = 297
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 92 HRPRCPSIRRN*YNAPSWLSRLNDMM 169
H CP I + + PSW S LN ++
Sbjct: 233 HERWCPRIEMDDHGEPSWQSDLNTVL 258
>Z82051-8|CAB04814.1| 349|Caenorhabditis elegans Hypothetical
protein T23D5.11 protein.
Length = 349
Score = 25.0 bits (52), Expect = 8.7
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 270 GADHIFISNGKKVSFFVAELDAGFHHFLHRARHVIISFSLLSQLG 136
G+ + N + + F A + FH FLH +I FS LG
Sbjct: 29 GSYKYLLVNFQVLGFIFATFEYLFHTFLHTYNASLIYFSFSRPLG 73
>Z82051-5|CAB04813.1| 216|Caenorhabditis elegans Hypothetical
protein T23D5.8 protein.
Length = 216
Score = 25.0 bits (52), Expect = 8.7
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 270 GADHIFISNGKKVSFFVAELDAGFHHFLHRARHVIISFSLLSQLG 136
G+ + N + + F A + FH FLH +I FS LG
Sbjct: 29 GSYKYLLVNFQVLGFIFATFEYLFHTFLHTYNASLIYFSFSRPLG 73
>AF016672-8|AAB66117.4| 998|Caenorhabditis elegans Jnk interacting
protein (scaffoldprotein) protein 1 protein.
Length = 998
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 183 DEGSDGNRRRAQQRR 227
++G +GNRRR QQR+
Sbjct: 740 EDGINGNRRRRQQRK 754
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,597,128
Number of Sequences: 27780
Number of extensions: 114042
Number of successful extensions: 367
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 270584450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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