Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_B14
         (235 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    23   1.4  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    23   1.4  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    23   1.4  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   1.9  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    22   3.3  
DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.       21   5.8  

>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 230 FIHCVIMLRKKGSNW 186
           F+ CVI +RKK S W
Sbjct: 16  FVLCVIHIRKKYSFW 30


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 135 WLKVPYWV*LWRIV*RYPIASFFPKHD 215
           WLK PYW     IV  + +   + KHD
Sbjct: 321 WLKEPYW-----IVNAFNVDPLYLKHD 342


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 135 WLKVPYWV*LWRIV*RYPIASFFPKHD 215
           WLK PYW     IV  + +   + KHD
Sbjct: 352 WLKEPYW-----IVNAFNVDPLYLKHD 373


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 83  VMKIVKHCHEESCSNMEVAQGALLG 157
           ++KI KH  +E  S+  V QG+ +G
Sbjct: 726 IVKIDKHMSKEIVSSSGVPQGSNIG 750


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 20   TSRRVPDNEPTITYVQCDGLAVM 88
            T+RRVP N+     +  D LA +
Sbjct: 1192 TARRVPSNQGVREVLSADALAAI 1214


>DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.
          Length = 391

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 107 GSA*LFSLPPIHRI 66
           G   +FSLPP H++
Sbjct: 165 GEGDVFSLPPCHKL 178


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 284,433
Number of Sequences: 2352
Number of extensions: 5117
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 52
effective length of database: 441,675
effective search space used: 11041875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)