Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_B14
(235 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U54559-1|AAD03465.1| 352|Homo sapiens translation initiation fa... 64 1e-10
CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein. 64 1e-10
BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation ... 64 1e-10
BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation ... 64 1e-10
AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation ... 64 1e-10
AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation ... 64 1e-10
AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation ... 62 3e-10
BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein. 52 3e-07
BC101793-1|AAI01794.1| 400|Homo sapiens sirtuin (silent mating ... 31 0.66
BC101791-1|AAI01792.1| 400|Homo sapiens sirtuin (silent mating ... 31 0.66
BC017305-1|AAH17305.1| 400|Homo sapiens sirtuin (silent mating ... 31 0.66
AF233395-1|AAF43431.1| 400|Homo sapiens sir2-related protein ty... 31 0.66
AF242521-1|AAF99601.1| 189|Homo sapiens ornithine decarboxylase... 28 4.6
AF057297-1|AAD03265.1| 189|Homo sapiens ornithine decarboxylase... 28 4.6
AF098798-1|AAD20219.1| 349|Homo sapiens unknown protein. 27 8.1
AF029689-1|AAD22381.1| 349|Homo sapiens quinone oxidoreductase ... 27 8.1
>U54559-1|AAD03465.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/68 (50%), Positives = 43/68 (63%)
Frame = +2
Query: 5 EGRGGTSRRVPDNEPTITYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEI 184
+G+GG+ + + VQ DGL V+KI+KH EE EV QG LLGLVVE+RLEI
Sbjct: 26 KGKGGSG------DSAVKQVQIDGLVVLKIIKHYQEEG-QGTEVVQGVLLGLVVEDRLEI 78
Query: 185 PNCFLFSE 208
NCF F +
Sbjct: 79 TNCFPFPQ 86
>CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein.
Length = 352
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/68 (50%), Positives = 43/68 (63%)
Frame = +2
Query: 5 EGRGGTSRRVPDNEPTITYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEI 184
+G+GG+ + + VQ DGL V+KI+KH EE EV QG LLGLVVE+RLEI
Sbjct: 26 KGKGGSG------DSAVKQVQIDGLVVLKIIKHYQEEG-QGTEVVQGVLLGLVVEDRLEI 78
Query: 185 PNCFLFSE 208
NCF F +
Sbjct: 79 TNCFPFPQ 86
>BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/68 (50%), Positives = 43/68 (63%)
Frame = +2
Query: 5 EGRGGTSRRVPDNEPTITYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEI 184
+G+GG+ + + VQ DGL V+KI+KH EE EV QG LLGLVVE+RLEI
Sbjct: 26 KGKGGSG------DSAVKQVQIDGLVVLKIIKHYQEEG-QGTEVVQGVLLGLVVEDRLEI 78
Query: 185 PNCFLFSE 208
NCF F +
Sbjct: 79 TNCFPFPQ 86
>BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/68 (50%), Positives = 43/68 (63%)
Frame = +2
Query: 5 EGRGGTSRRVPDNEPTITYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEI 184
+G+GG+ + + VQ DGL V+KI+KH EE EV QG LLGLVVE+RLEI
Sbjct: 26 KGKGGSG------DSAVKQVQIDGLVVLKIIKHYQEEG-QGTEVVQGVLLGLVVEDRLEI 78
Query: 185 PNCFLFSE 208
NCF F +
Sbjct: 79 TNCFPFPQ 86
>AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/68 (50%), Positives = 43/68 (63%)
Frame = +2
Query: 5 EGRGGTSRRVPDNEPTITYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEI 184
+G+GG+ + + VQ DGL V+KI+KH EE EV QG LLGLVVE+RLEI
Sbjct: 26 KGKGGSG------DSAVKQVQIDGLVVLKIIKHYQEEG-QGTEVVQGVLLGLVVEDRLEI 78
Query: 185 PNCFLFSE 208
NCF F +
Sbjct: 79 TNCFPFPQ 86
>AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/68 (50%), Positives = 43/68 (63%)
Frame = +2
Query: 5 EGRGGTSRRVPDNEPTITYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEI 184
+G+GG+ + + VQ DGL V+KI+KH EE EV QG LLGLVVE+RLEI
Sbjct: 26 KGKGGSG------DSAVKQVQIDGLVVLKIIKHYQEEG-QGTEVVQGVLLGLVVEDRLEI 78
Query: 185 PNCFLFSE 208
NCF F +
Sbjct: 79 TNCFPFPQ 86
>AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 62.1 bits (144), Expect = 3e-10
Identities = 33/68 (48%), Positives = 43/68 (63%)
Frame = +2
Query: 5 EGRGGTSRRVPDNEPTITYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEI 184
+G+GG+ + + VQ DGL V+KI+KH EE EV QG LLGLVV++RLEI
Sbjct: 26 KGKGGSG------DSAVKQVQIDGLVVLKIIKHYQEEG-QGTEVVQGVLLGLVVKDRLEI 78
Query: 185 PNCFLFSE 208
NCF F +
Sbjct: 79 TNCFPFPQ 86
>BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein.
Length = 349
Score = 52.0 bits (119), Expect = 3e-07
Identities = 32/68 (47%), Positives = 39/68 (57%)
Frame = +2
Query: 5 EGRGGTSRRVPDNEPTITYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEI 184
+G+GG+ + + VQ DGL V K H EE EV QG LLGLVVE+RLEI
Sbjct: 26 KGKGGSG------DSAVKQVQIDGLVVFK---HYQEEG-QGTEVVQGVLLGLVVEDRLEI 75
Query: 185 PNCFLFSE 208
NCF F +
Sbjct: 76 TNCFPFPQ 83
>BC101793-1|AAI01794.1| 400|Homo sapiens sirtuin (silent mating
type information regulation 2 homolog) 7 (S. cerevisiae)
protein.
Length = 400
Score = 31.1 bits (67), Expect = 0.66
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +2
Query: 5 EGRGGTSRRVPDNEPTITYVQCDGLAVMKIVKHCHEESCSNMEVAQG 145
+GR ++ + + EPT+T++ L K+V+H ++C + + G
Sbjct: 131 KGRSVSAADLSEAEPTLTHMSITRLHEQKLVQHVVSQNCDGLHLRSG 177
>BC101791-1|AAI01792.1| 400|Homo sapiens sirtuin (silent mating
type information regulation 2 homolog) 7 (S. cerevisiae)
protein.
Length = 400
Score = 31.1 bits (67), Expect = 0.66
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +2
Query: 5 EGRGGTSRRVPDNEPTITYVQCDGLAVMKIVKHCHEESCSNMEVAQG 145
+GR ++ + + EPT+T++ L K+V+H ++C + + G
Sbjct: 131 KGRSVSAADLSEAEPTLTHMSITRLHEQKLVQHVVSQNCDGLHLRSG 177
>BC017305-1|AAH17305.1| 400|Homo sapiens sirtuin (silent mating
type information regulation 2 homolog) 7 (S. cerevisiae)
protein.
Length = 400
Score = 31.1 bits (67), Expect = 0.66
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +2
Query: 5 EGRGGTSRRVPDNEPTITYVQCDGLAVMKIVKHCHEESCSNMEVAQG 145
+GR ++ + + EPT+T++ L K+V+H ++C + + G
Sbjct: 131 KGRSVSAADLSEAEPTLTHMSITRLHEQKLVQHVVSQNCDGLHLRSG 177
>AF233395-1|AAF43431.1| 400|Homo sapiens sir2-related protein type
7 protein.
Length = 400
Score = 31.1 bits (67), Expect = 0.66
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +2
Query: 5 EGRGGTSRRVPDNEPTITYVQCDGLAVMKIVKHCHEESCSNMEVAQG 145
+GR ++ + + EPT+T++ L K+V+H ++C + + G
Sbjct: 131 KGRSVSAADLSEAEPTLTHMSITRLHEQKLVQHVVSQNCDGLHLRSG 177
>AF242521-1|AAF99601.1| 189|Homo sapiens ornithine decarboxylase
antizyme protein.
Length = 189
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 212 MLRKKGSNWVSLNDSPQLNPVRHLEPPPYYC 120
M+ + S+ + L++ PQL RH+ P P +C
Sbjct: 1 MINTQDSSILPLSNCPQLQCCRHIVPGPLWC 31
>AF057297-1|AAD03265.1| 189|Homo sapiens ornithine decarboxylase
antizyme 2 protein.
Length = 189
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 212 MLRKKGSNWVSLNDSPQLNPVRHLEPPPYYC 120
M+ + S+ + L++ PQL RH+ P P +C
Sbjct: 1 MINTQDSSILPLSNCPQLQCCRHIVPGPLWC 31
>AF098798-1|AAD20219.1| 349|Homo sapiens unknown protein.
Length = 349
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 224 HCVIMLRKKGSNWVSLNDSPQLNPVRHLEPPPYYCMILHGSA*LF 90
H +I L G +WV+ ++ Q L+PP +C++L G+ F
Sbjct: 246 HDIITLLGVGGHWVTTEENLQ------LDPPDSHCLLLKGATLAF 284
>AF029689-1|AAD22381.1| 349|Homo sapiens quinone oxidoreductase
homolog-1 protein.
Length = 349
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 224 HCVIMLRKKGSNWVSLNDSPQLNPVRHLEPPPYYCMILHGSA*LF 90
H +I L G +WV+ ++ Q L+PP +C++L G+ F
Sbjct: 246 HDIITLLGVGGHWVTTEENLQ------LDPPDSHCLLLKGATLAF 284
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,133,340
Number of Sequences: 237096
Number of extensions: 844379
Number of successful extensions: 5099
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5088
length of database: 76,859,062
effective HSP length: 56
effective length of database: 63,581,686
effective search space used: 1335215406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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