Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_B14
         (235 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.          21   2.0  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   2.6  
M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee homeobox-...    20   3.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    20   3.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   3.5  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    20   4.6  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    19   6.0  

>AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.
          Length = 88

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -3

Query: 221 CVIMLRKKGSNWVSLNDS 168
           C+++ RK   NW+ ++ S
Sbjct: 57  CIVVRRKLEENWIHVDIS 74


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 199 FFRSMMTQWM 228
           FFR MM  WM
Sbjct: 346 FFRGMMQAWM 355


>M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H40. ).
          Length = 74

 Score = 20.2 bits (40), Expect = 3.5
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1

Query: 172 SFRDTQLLPFFRSMMTQWMKR 234
           S  +TQ+  +F++  T+W K+
Sbjct: 46  SLTETQVKIWFQNRRTKWKKQ 66


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.2 bits (40), Expect = 3.5
 Identities = 4/9 (44%), Positives = 8/9 (88%)
 Frame = +3

Query: 126 IWRWLKVPY 152
           +WRW+++ Y
Sbjct: 58  LWRWIRLTY 66


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.2 bits (40), Expect = 3.5
 Identities = 4/9 (44%), Positives = 8/9 (88%)
 Frame = +3

Query: 126 IWRWLKVPY 152
           +WRW+++ Y
Sbjct: 96  LWRWIRLTY 104


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.8 bits (39), Expect = 4.6
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -3

Query: 131 PYYCMILHGSA*LFSLPPIHRIERK**LVHYQE 33
           P Y +   GS   +++   HRI  K  LV + E
Sbjct: 59  PRYPLPYSGSKCTWTITSYHRINLKCSLVEFSE 91


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 78  NPSH*T*VIVGSLSGTRLDVPP 13
           NPSH    + G +  T   +PP
Sbjct: 471 NPSHMYRAVCGRIENTIQGLPP 492


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,477
Number of Sequences: 438
Number of extensions: 1499
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  3772710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)