Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_B13
(442 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK125767-1|BAC86280.1| 168|Homo sapiens protein ( Homo sapiens ... 36 0.047
BC063822-1|AAH63822.1| 1009|Homo sapiens EGF-like, fibronectin t... 29 7.1
AK096474-1|BAC04800.1| 403|Homo sapiens protein ( Homo sapiens ... 29 7.1
M61893-1|AAA52375.1| 610|Homo sapiens endothelial leukocyte adh... 29 9.4
M30640-1|AAA52377.1| 610|Homo sapiens endothelial leukocyte adh... 29 9.4
M24736-1|AAA52376.1| 610|Homo sapiens endothelial leukocyte adh... 29 9.4
BC142711-1|AAI42712.1| 610|Homo sapiens selectin E (endothelial... 29 9.4
BC142677-1|AAI42678.1| 610|Homo sapiens selectin E (endothelial... 29 9.4
BC131551-1|AAI31552.1| 610|Homo sapiens selectin E (endothelial... 29 9.4
AL021940-6|CAA17434.1| 610|Homo sapiens selectin E (endothelial... 29 9.4
AL021940-5|CAI19360.1| 484|Homo sapiens selectin E (endothelial... 29 9.4
AL021940-4|CAI19359.1| 547|Homo sapiens selectin E (endothelial... 29 9.4
AL021940-3|CAI19357.1| 485|Homo sapiens selectin E (endothelial... 29 9.4
AL021940-2|CAI19358.1| 547|Homo sapiens selectin E (endothelial... 29 9.4
AF540378-1|AAN01237.1| 610|Homo sapiens selectin E (endothelial... 29 9.4
>AK125767-1|BAC86280.1| 168|Homo sapiens protein ( Homo sapiens
cDNA FLJ43779 fis, clone TESTI2051488. ).
Length = 168
Score = 36.3 bits (80), Expect = 0.047
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = +1
Query: 10 ARGSAWSPSP----CKWCGCRPPHGSRH 81
+RGS+WS SP C+WC C H S H
Sbjct: 106 SRGSSWSSSPPGSTCRWCSCHSHHHSHH 133
>BC063822-1|AAH63822.1| 1009|Homo sapiens EGF-like, fibronectin type
III and laminin G domains protein.
Length = 1009
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 291 LTARRHAVRVQDSRCVYPPALPWPHFCEESDSEVQVIAAEGGS 419
L++ RH + C+ P A PH SDSEV + G S
Sbjct: 125 LSSPRHVTTLSQDSCLPPAAPQQPHVIVVSDSEVALSWKPGAS 167
>AK096474-1|BAC04800.1| 403|Homo sapiens protein ( Homo sapiens
cDNA FLJ39155 fis, clone OCBBF2001983. ).
Length = 403
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 291 LTARRHAVRVQDSRCVYPPALPWPHFCEESDSEVQVIAAEGGS 419
L++ RH + C+ P A PH SDSEV + G S
Sbjct: 125 LSSPRHVTTLSQDSCLPPAAPQQPHVIVVSDSEVALSWKPGAS 167
>M61893-1|AAA52375.1| 610|Homo sapiens endothelial leukocyte
adhesion molecule 1 protein.
Length = 610
Score = 28.7 bits (61), Expect = 9.4
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -1
Query: 415 PPSAAITCTSL---SDSSQKCGHGNAGGYTQRESCTRT 311
P A+TC ++ + S +C H AG +T + SC T
Sbjct: 297 PTCKAVTCRAVRQPQNGSVRCSHSPAGEFTFKSSCNFT 334
>M30640-1|AAA52377.1| 610|Homo sapiens endothelial leukocyte
adhesion molecule 1 protein.
Length = 610
Score = 28.7 bits (61), Expect = 9.4
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -1
Query: 415 PPSAAITCTSL---SDSSQKCGHGNAGGYTQRESCTRT 311
P A+TC ++ + S +C H AG +T + SC T
Sbjct: 297 PTCKAVTCRAVRQPQNGSVRCSHSPAGEFTFKSSCNFT 334
>M24736-1|AAA52376.1| 610|Homo sapiens endothelial leukocyte
adhesion molecule 1 protein.
Length = 610
Score = 28.7 bits (61), Expect = 9.4
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -1
Query: 415 PPSAAITCTSL---SDSSQKCGHGNAGGYTQRESCTRT 311
P A+TC ++ + S +C H AG +T + SC T
Sbjct: 297 PTCKAVTCRAVRQPQNGSVRCSHSPAGEFTFKSSCNFT 334
>BC142711-1|AAI42712.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 28.7 bits (61), Expect = 9.4
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -1
Query: 415 PPSAAITCTSL---SDSSQKCGHGNAGGYTQRESCTRT 311
P A+TC ++ + S +C H AG +T + SC T
Sbjct: 297 PTCKAVTCRAVRQPQNGSVRCSHSPAGEFTFKSSCNFT 334
>BC142677-1|AAI42678.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 28.7 bits (61), Expect = 9.4
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -1
Query: 415 PPSAAITCTSL---SDSSQKCGHGNAGGYTQRESCTRT 311
P A+TC ++ + S +C H AG +T + SC T
Sbjct: 297 PTCKAVTCRAVRQPQNGSVRCSHSPAGEFTFKSSCNFT 334
>BC131551-1|AAI31552.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 28.7 bits (61), Expect = 9.4
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -1
Query: 415 PPSAAITCTSL---SDSSQKCGHGNAGGYTQRESCTRT 311
P A+TC ++ + S +C H AG +T + SC T
Sbjct: 297 PTCKAVTCRAVRQPQNGSVRCSHSPAGEFTFKSSCNFT 334
>AL021940-6|CAA17434.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 28.7 bits (61), Expect = 9.4
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -1
Query: 415 PPSAAITCTSL---SDSSQKCGHGNAGGYTQRESCTRT 311
P A+TC ++ + S +C H AG +T + SC T
Sbjct: 297 PTCKAVTCRAVRQPQNGSVRCSHSPAGEFTFKSSCNFT 334
>AL021940-5|CAI19360.1| 484|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 484
Score = 28.7 bits (61), Expect = 9.4
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -1
Query: 415 PPSAAITCTSL---SDSSQKCGHGNAGGYTQRESCTRT 311
P A+TC ++ + S +C H AG +T + SC T
Sbjct: 297 PTCKAVTCRAVRQPQNGSVRCSHSPAGEFTFKSSCNFT 334
>AL021940-4|CAI19359.1| 547|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 547
Score = 28.7 bits (61), Expect = 9.4
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -1
Query: 415 PPSAAITCTSL---SDSSQKCGHGNAGGYTQRESCTRT 311
P A+TC ++ + S +C H AG +T + SC T
Sbjct: 297 PTCKAVTCRAVRQPQNGSVRCSHSPAGEFTFKSSCNFT 334
>AL021940-3|CAI19357.1| 485|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 485
Score = 28.7 bits (61), Expect = 9.4
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -1
Query: 415 PPSAAITCTSL---SDSSQKCGHGNAGGYTQRESCTRT 311
P A+TC ++ + S +C H AG +T + SC T
Sbjct: 235 PTCKAVTCRAVRQPQNGSVRCSHSPAGEFTFKSSCNFT 272
>AL021940-2|CAI19358.1| 547|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 547
Score = 28.7 bits (61), Expect = 9.4
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -1
Query: 415 PPSAAITCTSL---SDSSQKCGHGNAGGYTQRESCTRT 311
P A+TC ++ + S +C H AG +T + SC T
Sbjct: 297 PTCKAVTCRAVRQPQNGSVRCSHSPAGEFTFKSSCNFT 334
>AF540378-1|AAN01237.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 28.7 bits (61), Expect = 9.4
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -1
Query: 415 PPSAAITCTSL---SDSSQKCGHGNAGGYTQRESCTRT 311
P A+TC ++ + S +C H AG +T + SC T
Sbjct: 297 PTCKAVTCRAVRQPQNGSVRCSHSPAGEFTFKSSCNFT 334
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,277,481
Number of Sequences: 237096
Number of extensions: 1005362
Number of successful extensions: 2791
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2787
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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