Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_B12
         (176 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    22   3.0  
EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       21   7.0  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    21   7.0  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 9/18 (50%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
 Frame = +1

Query: 70  DIMPRPTRESYG-DQKPP 120
           +  P+P   SYG  QKPP
Sbjct: 683 EFFPQPKYRSYGLQQKPP 700


>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 141 RYGHLEFTGAH 173
           RYG ++FT  H
Sbjct: 302 RYGEIDFTNGH 312


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 154 RWP*RSRLCMRRVVSDHRK 98
           R P RS LC +  +S H+K
Sbjct: 291 REPDRSNLCWKCGLSGHKK 309


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,280
Number of Sequences: 2352
Number of extensions: 2183
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 37
effective length of database: 476,955
effective search space used: 10016055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)