Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_B11
         (193 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   0.33 
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   0.58 
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   1.8  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           20   2.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    20   3.1  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    19   4.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    19   4.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    19   7.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    18   9.4  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    18   9.4  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 0.33
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 154 ASSCFIIGLCCYFIAHV 104
           A+S  ++   CYF AHV
Sbjct: 154 ATSLLVVAEVCYFTAHV 170


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 0.58
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 163 ILQASSCFIIGLCCYFIAHVCDLRK 89
           IL+ + CF+I +   F+A     RK
Sbjct: 222 ILKKTVCFVIPIMLLFLAFFVSFRK 246


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 166 RILQASSCFIIGLC 125
           RIL  S+ F +GLC
Sbjct: 10  RILLISAVFCVGLC 23


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 20.2 bits (40), Expect = 2.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 59  TTYFHPRAEFMQPRGSTS 6
           T +FHP + F +   STS
Sbjct: 390 TLFFHPMSSFREFAVSTS 407


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 145 CFIIGLCCYFIAHVCDL 95
           CF +  CC F A  C++
Sbjct: 743 CFALCHCCDFDACDCEM 759


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 5   N*WIPVAA*IRHEGE 49
           N W+P    +RH+G+
Sbjct: 130 NIWVPQKYRLRHKGD 144


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 5   N*WIPVAA*IRHEGE 49
           N W+P    +RH+G+
Sbjct: 130 NIWVPQKYRLRHKGD 144


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +3

Query: 93  RKSQTWAIK*QQRPMIKQL 149
           R  + W  K  QRP+ + L
Sbjct: 6   RDGEKWKGKMSQRPLARML 24


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 139 IIGLCCYFIAHVCD 98
           I G   +FI H CD
Sbjct: 570 IYGNISHFINHSCD 583


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +1

Query: 4   ELVDPRGC 27
           E VDP GC
Sbjct: 400 ETVDPAGC 407


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,865
Number of Sequences: 438
Number of extensions: 869
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 43
effective length of database: 127,509
effective search space used:  2550180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)