Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_B10
(275 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 0.70
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 1.6
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 21 2.8
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 2.8
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 2.8
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 2.8
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 3.7
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 3.7
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 20 4.9
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 19 8.6
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 19 8.6
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 19 8.6
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.0 bits (47), Expect = 0.70
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = +1
Query: 40 RTARKHVNHRRE----QRWADKEFKKAH--MGTRWKANPFGGASHAKGIVLEKVGVEAKQ 201
RT + + +RRE Q+ ++E++K M ++ +H K +VLE+ ++K
Sbjct: 30 RTKEERLQYRREAWLVQQEREQEYEKLKRKMILEYELYIKYSHTHEKKLVLERSKTKSKS 89
Query: 202 PNSAIR 219
P S R
Sbjct: 90 PESRDR 95
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 1.6
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +1
Query: 202 PNSAIRKCV 228
PNSA+RKC+
Sbjct: 584 PNSAVRKCM 592
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.0 bits (42), Expect = 2.8
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +3
Query: 48 AQARESSSRAAMGRQGIQKSPHGYEMEGEPLRWCISC*GH 167
A + E+S+ A + + K P + + RW SC G+
Sbjct: 34 ATSHEASAPAEGKFKTVSKVPGPFSLPIFGTRWIFSCIGY 73
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 2.8
Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
Frame = -2
Query: 61 SRACAPCEYPEV--YP 20
S CA CE PEV YP
Sbjct: 216 SNMCALCEKPEVCDYP 231
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 2.8
Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
Frame = -2
Query: 61 SRACAPCEYPEV--YP 20
S CA CE PEV YP
Sbjct: 216 SNMCALCEKPEVCDYP 231
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 2.8
Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
Frame = -2
Query: 61 SRACAPCEYPEV--YP 20
S CA CE PEV YP
Sbjct: 216 SNMCALCEKPEVCDYP 231
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.6 bits (41), Expect = 3.7
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 110 TWVRDGRRTP 139
TW +DGR+ P
Sbjct: 366 TWYKDGRQLP 375
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.6 bits (41), Expect = 3.7
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 110 TWVRDGRRTP 139
TW +DGR+ P
Sbjct: 366 TWYKDGRQLP 375
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 20.2 bits (40), Expect = 4.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -2
Query: 127 SISYPCGLF*IPCRPIAARD 68
++SY G + IP I++RD
Sbjct: 113 AVSYTSGFYHIPVIGISSRD 132
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 19.4 bits (38), Expect = 8.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 111 VGFFEFLVGPSL 76
+G EFL+ PSL
Sbjct: 98 IGMGEFLIDPSL 109
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 19.4 bits (38), Expect = 8.6
Identities = 5/15 (33%), Positives = 10/15 (66%)
Frame = +1
Query: 76 QRWADKEFKKAHMGT 120
+RW D+ ++ H G+
Sbjct: 311 ERWRDRIYEAIHTGS 325
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 19.4 bits (38), Expect = 8.6
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -3
Query: 138 GVRLPSRTHVGFFEFL 91
G L THV FF L
Sbjct: 383 GAELMQETHVCFFSLL 398
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,912
Number of Sequences: 438
Number of extensions: 1557
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 5388717
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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