Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_B08
         (376 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    24   0.58 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   2.4  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   3.1  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   5.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    20   9.5  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 0.58
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 269 ASQKVFGERDWIGEIRHFVRLCGHL 195
           AS+KV  E+ WI     + RLC HL
Sbjct: 254 ASEKVTSEKSWIALNDDYNRLC-HL 277


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 204 WSSLGGYLRTRKDFGTHGMEKPRKTNP 124
           W S  G+ R+   FG   +  P + NP
Sbjct: 177 WHSHSGFQRSDGTFGPFIVRVPEEDNP 203


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 12/48 (25%), Positives = 21/48 (43%)
 Frame = -2

Query: 147 EKPRKTNPRFLIRRFGVIS*SQEHRGRCVPFLKFDRSRSLAVLHGGAS 4
           + P  + P F  +R GVIS       + V   +   + +   +HGG +
Sbjct: 8   DTPTSSAPAFSEQRGGVISEGVASSLQVVALFQLSETTAPRSIHGGTT 55


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 346 TCWTWSSNLTRSMGATPVLET 284
           TC   SS ++R+    P LET
Sbjct: 40  TCTRISSTVSRNTDTYPTLET 60


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 150 MEKPRKTNPRF 118
           +EKPRK  P F
Sbjct: 92  LEKPRKVLPNF 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,927
Number of Sequences: 336
Number of extensions: 2053
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)