Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_B08
(376 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309 48 2e-06
05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887 47 4e-06
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377... 47 6e-06
11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733 45 2e-05
07_03_0117 + 13589997-13590998 45 2e-05
01_06_0447 + 29452194-29452361,29453232-29453317,29453403-294536... 44 3e-05
02_02_0134 + 7082462-7082627,7084199-7084325,7084404-7084611,708... 42 1e-04
01_05_0410 + 21914995-21915168,21915268-21915353,21915446-219156... 42 2e-04
02_01_0763 - 5665010-5665202,5665285-5665375,5665460-5666245,566... 38 0.003
06_03_0691 + 23552437-23552914,23555168-23555953,23556045-235561... 38 0.003
05_06_0233 + 26599068-26599466,26601214-26601829,26601871-266019... 38 0.003
03_02_0489 + 8836306-8836500,8836906-8837082,8837175-8837321,883... 35 0.024
01_07_0083 + 40970890-40971015,40971886-40971994,40972679-409727... 34 0.042
01_01_1139 - 9024609-9024708,9024832-9024910,9025083-9025252,902... 33 0.055
07_03_0982 + 23116343-23117089,23117227-23117313,23117424-231175... 31 0.22
05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717 31 0.22
06_03_1450 + 30246702-30247346,30248603-30248689,30248789-302489... 30 0.52
03_01_0644 - 4719954-4720022,4720445-4720912,4721009-4721312,472... 30 0.68
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 30 0.68
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 29 1.2
01_01_0877 - 6878905-6879600,6880696-6880968 29 1.2
06_01_0805 + 6043248-6043551,6043654-6043755,6044858-6044964,604... 27 3.6
06_01_0185 - 1437693-1437834,1437969-1438078,1438214-1438264,143... 27 3.6
11_04_0307 + 16185405-16185713,16185847-16185942,16186626-161867... 27 4.8
10_07_0101 - 12872296-12873288 27 6.3
07_03_1611 - 28136398-28136572,28137995-28138567,28138762-28139123 27 6.3
04_03_0895 + 20633554-20634480 27 6.3
11_06_0418 - 23317077-23317343,23317614-23317787,23317886-233179... 26 8.4
09_03_0027 - 11690348-11690828,11694815-11695749 26 8.4
07_01_1100 + 10097044-10097949,10098074-10098274,10098796-100989... 26 8.4
03_01_0436 + 3384526-3385236,3387857-3388720 26 8.4
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 26 8.4
>02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309
Length = 382
Score = 48.0 bits (109), Expect = 2e-06
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3
Query: 246 FAKDFLAGGISAGVSKTGVAPIERVKLLLQVQ 341
F DFL GG+SA VSKT APIERVKLL+Q Q
Sbjct: 82 FMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQ 113
>05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887
Length = 380
Score = 47.2 bits (107), Expect = 4e-06
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = +3
Query: 246 FAKDFLAGGISAGVSKTGVAPIERVKLLLQVQHVSKESRR 365
F DF+ GG+SA VSKT APIER+KLL+Q Q +S R
Sbjct: 80 FMIDFMMGGVSAAVSKTAAAPIERIKLLIQNQDEMIKSGR 119
>05_07_0283 -
28937027-28937110,28937211-28937549,28937641-28937754,
28937843-28937955,28939050-28939087,28939315-28939478,
28939746-28939794,28940986-28941152
Length = 355
Score = 46.8 bits (106), Expect = 6e-06
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = +3
Query: 240 VAFAKDFLAGGISAGVSKTGVAPIERVKLLLQVQH 344
++ K AGG++ GVS+T VAP+ER+K+LLQVQ+
Sbjct: 41 LSICKSLFAGGVAGGVSRTAVAPLERMKILLQVQN 75
>11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733
Length = 329
Score = 45.2 bits (102), Expect = 2e-05
Identities = 25/42 (59%), Positives = 30/42 (71%)
Frame = +3
Query: 243 AFAKDFLAGGISAGVSKTGVAPIERVKLLLQVQHVSKESRRG 368
A A DF GG +A V+KTG AP+ERVKLLLQ Q ++ RRG
Sbjct: 23 AAAADFAMGGAAAVVAKTGAAPVERVKLLLQNQ--AEMLRRG 62
>07_03_0117 + 13589997-13590998
Length = 333
Score = 45.2 bits (102), Expect = 2e-05
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +3
Query: 174 LSASIHPKMTT*SNKMSNLADPVAFAKDFLAGGISAGVSKTGVAPIERVKLLLQV 338
LS+ P S + + AFA++ +AGG++ V+KT VAP+ERV L+ QV
Sbjct: 17 LSSDAAPSPANLSRTATAICSTPAFAREMVAGGVAGVVAKTAVAPLERVNLMRQV 71
>01_06_0447 +
29452194-29452361,29453232-29453317,29453403-29453610,
29454252-29454381,29454561-29454745,29454858-29454989,
29455747-29455851
Length = 337
Score = 44.4 bits (100), Expect = 3e-05
Identities = 17/32 (53%), Positives = 26/32 (81%)
Frame = +3
Query: 246 FAKDFLAGGISAGVSKTGVAPIERVKLLLQVQ 341
FAK+ +AGG++ SKT +AP+ER+K+LLQ +
Sbjct: 27 FAKEMIAGGVAGAFSKTAIAPLERLKILLQTR 58
>02_02_0134 +
7082462-7082627,7084199-7084325,7084404-7084611,
7084864-7084990,7085071-7085255,7085332-7085454,
7085777-7085836,7085980-7086117
Length = 377
Score = 42.3 bits (95), Expect = 1e-04
Identities = 18/35 (51%), Positives = 28/35 (80%)
Frame = +3
Query: 237 PVAFAKDFLAGGISAGVSKTGVAPIERVKLLLQVQ 341
P+A ++ +AGG++ GV+KT VAP+ERVK+L Q +
Sbjct: 23 PLA-VRELVAGGVAGGVAKTAVAPLERVKILFQAR 56
>01_05_0410 +
21914995-21915168,21915268-21915353,21915446-21915656,
21915869-21915998,21916740-21916924,21917014-21917145,
21917329-21917433
Length = 340
Score = 41.9 bits (94), Expect = 2e-04
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +3
Query: 246 FAKDFLAGGISAGVSKTGVAPIERVKLLLQVQ 341
+AK+ +AGG + +KT VAP+ERVK+LLQ +
Sbjct: 29 YAKELIAGGAAGAFAKTAVAPLERVKILLQTR 60
>02_01_0763 -
5665010-5665202,5665285-5665375,5665460-5666245,
5667745-5668225
Length = 516
Score = 37.9 bits (84), Expect = 0.003
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = +3
Query: 249 AKDFLAGGISAGVSKTGVAPIERVKLLLQVQ 341
+K +AGG+S S+T AP++R+K+++QVQ
Sbjct: 234 SKYLIAGGVSGATSRTATAPLDRLKVIMQVQ 264
Score = 28.3 bits (60), Expect = 2.1
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 213 NKMSNLADPVAFAKDFLAGGISAGVSKTGVAPIERVKLLLQ 335
+K N +D + + +AGG++ V++T + PI+ VK LQ
Sbjct: 318 SKGENKSD-IGTSGRLMAGGLAGAVAQTAIYPIDLVKTRLQ 357
>06_03_0691 +
23552437-23552914,23555168-23555953,23556045-23556135,
23556214-23556406
Length = 515
Score = 37.5 bits (83), Expect = 0.003
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +3
Query: 228 LADPVAFAKDFLAGGISAGVSKTGVAPIERVKLLLQVQ 341
++ V +K +AGGI+ S+T AP++R+K+++QVQ
Sbjct: 226 ISKSVNASKYLIAGGIAGAASRTATAPLDRLKVIMQVQ 263
Score = 27.1 bits (57), Expect = 4.8
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 261 LAGGISAGVSKTGVAPIERVKLLLQ 335
+AGG++ V++T + P++ VK LQ
Sbjct: 332 VAGGLAGAVAQTAIYPVDLVKTRLQ 356
>05_06_0233 +
26599068-26599466,26601214-26601829,26601871-26601917,
26602101-26602268
Length = 409
Score = 37.5 bits (83), Expect = 0.003
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = +3
Query: 246 FAKDFLAGGISAGVSKTGVAPIERVKLLLQVQ 341
F +D +AG G T VAPIER KLLLQ Q
Sbjct: 48 FERDLVAGAAMGGAVHTVVAPIERAKLLLQTQ 79
>03_02_0489 +
8836306-8836500,8836906-8837082,8837175-8837321,
8837636-8837737,8837824-8837894,8837992-8838059,
8838595-8838836
Length = 333
Score = 34.7 bits (76), Expect = 0.024
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +3
Query: 261 LAGGISAGVSKTGVAPIERVKLLLQVQ 341
LAGG++ VSKT AP+ R+ +L QVQ
Sbjct: 41 LAGGVAGAVSKTCTAPLARLTILFQVQ 67
>01_07_0083 +
40970890-40971015,40971886-40971994,40972679-40972790,
40972944-40973100,40973609-40973761,40974143-40974292,
40974803-40974999,40975446-40975473
Length = 343
Score = 33.9 bits (74), Expect = 0.042
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 255 DFLAGGISAGVSKTGVAPIERVKLLLQVQ 341
D LAG IS G+S+T +P++ +K+ QVQ
Sbjct: 16 DALAGAISGGISRTVTSPLDVIKIRFQVQ 44
>01_01_1139 -
9024609-9024708,9024832-9024910,9025083-9025252,
9025339-9025451,9025518-9025586,9025867-9025944,
9026022-9026084,9026590-9026670,9027166-9027222,
9027352-9027705
Length = 387
Score = 33.5 bits (73), Expect = 0.055
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 258 FLAGGISAGVSKTGVAPIERVKLLLQVQHV 347
F AG + V+KT AP++RVKLL+Q V
Sbjct: 93 FAAGAAAGAVAKTITAPLDRVKLLMQTHSV 122
>07_03_0982 +
23116343-23117089,23117227-23117313,23117424-23117555,
23118135-23118269,23118644-23118709,23118797-23118907,
23119237-23119329,23119555-23119659,23119752-23119829
Length = 517
Score = 31.5 bits (68), Expect = 0.22
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 224 RHFVRLCGHLWVDTCGQGRTSAHTE 150
RH R CG ++ D C QGRT+ E
Sbjct: 389 RHHCRNCGEIFCDKCSQGRTALTAE 413
>05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717
Length = 415
Score = 31.5 bits (68), Expect = 0.22
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 252 KDFLAGGISAGVSKTGVAPIERVKLLLQV 338
K ++GGI+ VS+T VAP+E ++ L V
Sbjct: 136 KRLISGGIAGAVSRTAVAPLETIRTHLMV 164
>06_03_1450 +
30246702-30247346,30248603-30248689,30248789-30248920,
30249016-30249162,30250375-30250440,30250519-30250629,
30251551-30251584,30251667-30251743,30251829-30251906
Length = 458
Score = 30.3 bits (65), Expect = 0.52
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 224 RHFVRLCGHLWVDTCGQGRTSAHTE 150
RH R CG ++ D C QGRT T+
Sbjct: 359 RHHCRNCGDIFCDKCTQGRTPLTTD 383
>03_01_0644 -
4719954-4720022,4720445-4720912,4721009-4721312,
4722321-4722745
Length = 421
Score = 29.9 bits (64), Expect = 0.68
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 231 ADPVAFAKDFLAGGISAGVSKTGVAPIERVKL 326
A + K +G ++A VS+T VAP+ER+KL
Sbjct: 122 AGAMNMTKHLWSGAVAAMVSRTVVAPLERLKL 153
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 29.9 bits (64), Expect = 0.68
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 264 AGGISAGVSKTGVAPIERVKLLLQV 338
AGG + VSKT AP+ R+ +L QV
Sbjct: 14 AGGFAGAVSKTCTAPLARLTILFQV 38
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 29.1 bits (62), Expect = 1.2
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -3
Query: 242 DWIGEIRHFVRLCGHL-W-VDTCGQGRTSAHTEWKNHEK 132
D G +HF R G W D CG+ R + H++WK H K
Sbjct: 147 DLTGIKKHFCRKHGEKKWKCDRCGK-RYAVHSDWKAHSK 184
>01_01_0877 - 6878905-6879600,6880696-6880968
Length = 322
Score = 29.1 bits (62), Expect = 1.2
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +3
Query: 222 SNLADPVAFAKDFLAGGISAGVSKTGVAPIERVKLLLQVQHVSKESRR 365
S++++P ++ LAG + + ++P+E VK+ LQ++ ++ RR
Sbjct: 110 SSMSEPPSYTSVALAGVGTGALQTLILSPVELVKIRLQLEAAGQKHRR 157
>06_01_0805 +
6043248-6043551,6043654-6043755,6044858-6044964,
6045687-6045824,6046340-6046651
Length = 320
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 292 LETPAEIPPARKSLANATGSARFD 221
++TPAEIPPA + A A R D
Sbjct: 1 MQTPAEIPPAAAAAAEAPAVPRSD 24
>06_01_0185 -
1437693-1437834,1437969-1438078,1438214-1438264,
1438877-1439122,1439244-1439315,1439614-1439648,
1439755-1439845,1440546-1440610,1440733-1440813,
1441020-1441137,1441535-1441627,1441865-1441997,
1442471-1442503,1443264-1443343,1443444-1443549,
1443621-1443795,1443884-1443980,1444819-1445251,
1445329-1445459,1446052-1446341,1446429-1447002
Length = 1051
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 267 QPESLWRTRLDRRDSTFCSIMW 202
+P SLW+ LD STF S +W
Sbjct: 560 RPSSLWKPYLDMLPSTFGSSIW 581
>11_04_0307 +
16185405-16185713,16185847-16185942,16186626-16186730,
16186938-16187090,16188395-16188478,16188566-16188694,
16188986-16189165,16189555-16189677,16189678-16189794,
16189889-16190053
Length = 486
Score = 27.1 bits (57), Expect = 4.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 210 IMWSSLGGYLRTRKDFGTHGMEKPR 136
++W L GYL T + F H +EK R
Sbjct: 132 LVWKLLLGYLPTERAFWPHELEKKR 156
>10_07_0101 - 12872296-12873288
Length = 330
Score = 26.6 bits (56), Expect = 6.3
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 228 LADPVAFAKDFLAGGISAGVSKTGV-APIERVKLLLQVQ 341
+A+P A A AGG+SA V+ V P++ V L VQ
Sbjct: 131 VAEPAASAAASAAGGVSAAVAAQVVWTPVDVVSQRLMVQ 169
>07_03_1611 - 28136398-28136572,28137995-28138567,28138762-28139123
Length = 369
Score = 26.6 bits (56), Expect = 6.3
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = -3
Query: 227 IRHFVRLCGHLWVDTCGQGRTSAHTEWKNH 138
+ H ++ C L D C + T EW++H
Sbjct: 287 VSHNIKFCSRLGGDECTRRLTELGLEWQHH 316
>04_03_0895 + 20633554-20634480
Length = 308
Score = 26.6 bits (56), Expect = 6.3
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +3
Query: 144 FPFRVCRSPSLSASIHPKMTT*SNKMSNLADPVAFAKDFLAGGISAGVSKTGVAPI 311
FP + SPS + S ++ T + + +P D GG GV G+A I
Sbjct: 141 FPPELLLSPSAAMSPAARLATIERSVRPMPEPAPEYVDITNGGGGGGVDDGGLAAI 196
>11_06_0418 -
23317077-23317343,23317614-23317787,23317886-23317971,
23318125-23318244,23318338-23318368,23318457-23318532,
23318672-23318759,23318877-23318938,23319041-23319117,
23319890-23319992,23320237-23320298,23321116-23321289,
23322160-23322405
Length = 521
Score = 26.2 bits (55), Expect = 8.4
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = -1
Query: 367 PRRLSLLTCW-TWSSNLTRSMGATPVLETPAEIPPARKSLANATGSA 230
P T W T + TRS+G TP L TP P S NA A
Sbjct: 8 PASSQATTAWATRTLTSTRSVGRTPTLSTP-HAPGPYTSSTNAEAIA 53
>09_03_0027 - 11690348-11690828,11694815-11695749
Length = 471
Score = 26.2 bits (55), Expect = 8.4
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -3
Query: 278 GDTASQKVFGERDWIGEIRHFVRLCGHLWVDTCGQGRTSAHTEWKNHEKRTPD 120
G+T+S VF E + E + VR LW+ G G + W+ PD
Sbjct: 378 GNTSSSLVFYELAYF-EAKRRVRAGDRLWMLAFGTGFKACSNVWRALRDSAPD 429
>07_01_1100 +
10097044-10097949,10098074-10098274,10098796-10098991,
10099697-10099881
Length = 495
Score = 26.2 bits (55), Expect = 8.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 224 RHFVRLCGHLWVDTCGQGR 168
RH R CG ++ TC +GR
Sbjct: 205 RHHCRFCGGIFCRTCSKGR 223
>03_01_0436 + 3384526-3385236,3387857-3388720
Length = 524
Score = 26.2 bits (55), Expect = 8.4
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -3
Query: 305 RYACLGDAGGDT-ASQKVFGERDWIGEIRHFVRLCGHLWVDTC 180
R+ GD G++ A Q+ ER +GE HF L VD C
Sbjct: 110 RFGLAGDFTGESMAFQRRMMERSGLGEATHFPASLFALPVDMC 152
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 26.2 bits (55), Expect = 8.4
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -3
Query: 242 DWIGEIRHFVRLCGHL-W-VDTCGQGRTSAHTEWKNHEK 132
D G +HF R G W D C + R + H++WK H K
Sbjct: 134 DLTGIKKHFSRKHGEKKWKCDKCSK-RYAVHSDWKAHSK 171
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,441,619
Number of Sequences: 37544
Number of extensions: 245357
Number of successful extensions: 728
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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