Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_B07
(184 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC069387-1|AAH69387.1| 449|Homo sapiens VPS13C protein protein. 51 8e-07
AK128650-1|BAC87549.1| 1662|Homo sapiens protein ( Homo sapiens ... 51 8e-07
AK000143-1|BAA90972.1| 442|Homo sapiens protein ( Homo sapiens ... 51 8e-07
AJ626861-1|CAF25188.1| 3628|Homo sapiens VPS13C-2B protein protein. 51 8e-07
AJ626860-1|CAF25187.1| 3585|Homo sapiens VPS13C-1B protein protein. 51 8e-07
AJ608771-1|CAE75583.1| 3753|Homo sapiens VPS13C-2A protein protein. 51 8e-07
AJ608770-1|CAE75582.1| 3710|Homo sapiens VPS13C-1A protein protein. 51 8e-07
BC041852-1|AAH41852.1| 1246|Homo sapiens VPS13A protein protein. 46 2e-05
AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sortin... 46 2e-05
AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sortin... 46 2e-05
AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sortin... 46 2e-05
AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sortin... 46 2e-05
AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sortin... 46 2e-05
AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sortin... 46 2e-05
AK022967-1|BAB14337.1| 975|Homo sapiens protein ( Homo sapiens ... 46 2e-05
AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein. 46 2e-05
AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein. 46 2e-05
AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis p... 46 2e-05
AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein. 46 2e-05
AB023203-1|BAA76830.1| 1458|Homo sapiens KIAA0986 protein protein. 46 2e-05
M61764-1|AAA52620.1| 451|Homo sapiens gamma-tubulin protein. 28 6.2
CR407642-1|CAG28570.1| 451|Homo sapiens TUBG1 protein. 28 6.2
BT019931-1|AAV38734.1| 451|Homo sapiens tubulin, gamma 1 protein. 28 6.2
BC108739-1|AAI08740.1| 451|Homo sapiens tubulin, gamma 2 protein. 28 6.2
BC051890-1|AAH51890.1| 451|Homo sapiens tubulin, gamma 2 protein. 28 6.2
BC047501-1|AAH47501.1| 541|Homo sapiens zinc finger protein 329... 28 6.2
BC009670-1|AAH09670.1| 451|Homo sapiens tubulin, gamma 2 protein. 28 6.2
BC000619-1|AAH00619.1| 451|Homo sapiens tubulin, gamma 1 protein. 28 6.2
AK022324-1|BAB14012.1| 451|Homo sapiens protein ( Homo sapiens ... 28 6.2
AF225971-1|AAF34188.1| 451|Homo sapiens gamma-tubulin protein. 28 6.2
AL442645-6|CAM17596.1| 1704|Homo sapiens transient receptor pote... 27 8.1
AL442645-5|CAM17595.1| 1322|Homo sapiens transient receptor pote... 27 8.1
AL442645-2|CAM17591.1| 1552|Homo sapiens transient receptor pote... 27 8.1
AL358786-6|CAM15782.1| 1704|Homo sapiens transient receptor pote... 27 8.1
AL358786-5|CAM15781.1| 1322|Homo sapiens transient receptor pote... 27 8.1
AL358786-2|CAM15777.1| 1552|Homo sapiens transient receptor pote... 27 8.1
AL356318-12|CAM13169.1| 1704|Homo sapiens transient receptor pot... 27 8.1
AL356318-11|CAM13168.1| 1322|Homo sapiens transient receptor pot... 27 8.1
AL356318-2|CAM13163.1| 1552|Homo sapiens transient receptor pote... 27 8.1
AL161913-2|CAM22746.1| 1704|Homo sapiens transient receptor pote... 27 8.1
AL161913-1|CAM22745.1| 1322|Homo sapiens transient receptor pote... 27 8.1
AL159990-10|CAM13096.1| 1704|Homo sapiens transient receptor pot... 27 8.1
AL159990-9|CAM13095.1| 1322|Homo sapiens transient receptor pote... 27 8.1
AL159990-2|CAM13090.1| 1552|Homo sapiens transient receptor pote... 27 8.1
>BC069387-1|AAH69387.1| 449|Homo sapiens VPS13C protein protein.
Length = 449
Score = 50.8 bits (116), Expect = 8e-07
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +3
Query: 9 ERNYEFLSQKELIGQVQSHYTGQALKQXXXXXXXXXXXXNPYGLVVGLKKGVEDLFYE 182
E Y+F + +LI V HY+ Q LKQ NP+GL+ GL +GVE LFYE
Sbjct: 82 EIRYQFYKRDQLIWSVVRHYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGVEALFYE 139
>AK128650-1|BAC87549.1| 1662|Homo sapiens protein ( Homo sapiens cDNA
FLJ46809 fis, clone TRACH3035451. ).
Length = 1662
Score = 50.8 bits (116), Expect = 8e-07
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +3
Query: 9 ERNYEFLSQKELIGQVQSHYTGQALKQXXXXXXXXXXXXNPYGLVVGLKKGVEDLFYE 182
E Y+F + +LI V HY+ Q LKQ NP+GL+ GL +GVE LFYE
Sbjct: 1549 EIRYQFYKRDQLIWSVVRHYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGVEALFYE 1606
>AK000143-1|BAA90972.1| 442|Homo sapiens protein ( Homo sapiens
cDNA FLJ20136 fis, clone COL07068. ).
Length = 442
Score = 50.8 bits (116), Expect = 8e-07
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +3
Query: 9 ERNYEFLSQKELIGQVQSHYTGQALKQXXXXXXXXXXXXNPYGLVVGLKKGVEDLFYE 182
E Y+F + +LI V HY+ Q LKQ NP+GL+ GL +GVE LFYE
Sbjct: 75 EIRYQFYKRDQLIWSVVRHYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGVEALFYE 132
>AJ626861-1|CAF25188.1| 3628|Homo sapiens VPS13C-2B protein protein.
Length = 3628
Score = 50.8 bits (116), Expect = 8e-07
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +3
Query: 9 ERNYEFLSQKELIGQVQSHYTGQALKQXXXXXXXXXXXXNPYGLVVGLKKGVEDLFYE 182
E Y+F + +LI V HY+ Q LKQ NP+GL+ GL +GVE LFYE
Sbjct: 3386 EIRYQFYKRDQLIWSVVRHYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGVEALFYE 3443
>AJ626860-1|CAF25187.1| 3585|Homo sapiens VPS13C-1B protein protein.
Length = 3585
Score = 50.8 bits (116), Expect = 8e-07
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +3
Query: 9 ERNYEFLSQKELIGQVQSHYTGQALKQXXXXXXXXXXXXNPYGLVVGLKKGVEDLFYE 182
E Y+F + +LI V HY+ Q LKQ NP+GL+ GL +GVE LFYE
Sbjct: 3343 EIRYQFYKRDQLIWSVVRHYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGVEALFYE 3400
>AJ608771-1|CAE75583.1| 3753|Homo sapiens VPS13C-2A protein protein.
Length = 3753
Score = 50.8 bits (116), Expect = 8e-07
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +3
Query: 9 ERNYEFLSQKELIGQVQSHYTGQALKQXXXXXXXXXXXXNPYGLVVGLKKGVEDLFYE 182
E Y+F + +LI V HY+ Q LKQ NP+GL+ GL +GVE LFYE
Sbjct: 3386 EIRYQFYKRDQLIWSVVRHYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGVEALFYE 3443
>AJ608770-1|CAE75582.1| 3710|Homo sapiens VPS13C-1A protein protein.
Length = 3710
Score = 50.8 bits (116), Expect = 8e-07
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +3
Query: 9 ERNYEFLSQKELIGQVQSHYTGQALKQXXXXXXXXXXXXNPYGLVVGLKKGVEDLFYE 182
E Y+F + +LI V HY+ Q LKQ NP+GL+ GL +GVE LFYE
Sbjct: 3343 EIRYQFYKRDQLIWSVVRHYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGVEALFYE 3400
>BC041852-1|AAH41852.1| 1246|Homo sapiens VPS13A protein protein.
Length = 1246
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +3
Query: 9 ERNYEFLSQKELIGQVQSHYTGQALKQXXXXXXXXXXXXNPYGLVVGLKKGVEDLFYE 182
E NY+F + +L +V HY+ QA+KQ NP+GL+ +GVE FYE
Sbjct: 980 ELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYE 1037
>AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +3
Query: 9 ERNYEFLSQKELIGQVQSHYTGQALKQXXXXXXXXXXXXNPYGLVVGLKKGVEDLFYE 182
E NY+F + +L +V HY+ QA+KQ NP+GL+ +GVE FYE
Sbjct: 2829 ELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYE 2886
>AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +3
Query: 9 ERNYEFLSQKELIGQVQSHYTGQALKQXXXXXXXXXXXXNPYGLVVGLKKGVEDLFYE 182
E NY+F + +L +V HY+ QA+KQ NP+GL+ +GVE FYE
Sbjct: 2829 ELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYE 2886
>AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +3
Query: 9 ERNYEFLSQKELIGQVQSHYTGQALKQXXXXXXXXXXXXNPYGLVVGLKKGVEDLFYE 182
E NY+F + +L +V HY+ QA+KQ NP+GL+ +GVE FYE
Sbjct: 2829 ELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYE 2886
>AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +3
Query: 9 ERNYEFLSQKELIGQVQSHYTGQALKQXXXXXXXXXXXXNPYGLVVGLKKGVEDLFYE 182
E NY+F + +L +V HY+ QA+KQ NP+GL+ +GVE FYE
Sbjct: 2829 ELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYE 2886
>AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +3
Query: 9 ERNYEFLSQKELIGQVQSHYTGQALKQXXXXXXXXXXXXNPYGLVVGLKKGVEDLFYE 182
E NY+F + +L +V HY+ QA+KQ NP+GL+ +GVE FYE
Sbjct: 2829 ELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYE 2886
>AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +3
Query: 9 ERNYEFLSQKELIGQVQSHYTGQALKQXXXXXXXXXXXXNPYGLVVGLKKGVEDLFYE 182
E NY+F + +L +V HY+ QA+KQ NP+GL+ +GVE FYE
Sbjct: 2829 ELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYE 2886
>AK022967-1|BAB14337.1| 975|Homo sapiens protein ( Homo sapiens
cDNA FLJ12905 fis, clone NT2RP2004366, weakly similar to
VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13. ).
Length = 975
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +3
Query: 9 ERNYEFLSQKELIGQVQSHYTGQALKQXXXXXXXXXXXXNPYGLVVGLKKGVEDLFYE 182
E NY+F + +L +V HY+ QA+KQ NP+GL+ +GVE FYE
Sbjct: 630 ELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYE 687
>AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein.
Length = 3069
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +3
Query: 9 ERNYEFLSQKELIGQVQSHYTGQALKQXXXXXXXXXXXXNPYGLVVGLKKGVEDLFYE 182
E NY+F + +L +V HY+ QA+KQ NP+GL+ +GVE FYE
Sbjct: 2829 ELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYE 2886
>AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein.
Length = 3135
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +3
Query: 9 ERNYEFLSQKELIGQVQSHYTGQALKQXXXXXXXXXXXXNPYGLVVGLKKGVEDLFYE 182
E NY+F + +L +V HY+ QA+KQ NP+GL+ +GVE FYE
Sbjct: 2790 ELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYE 2847
>AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis
protein.
Length = 3174
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +3
Query: 9 ERNYEFLSQKELIGQVQSHYTGQALKQXXXXXXXXXXXXNPYGLVVGLKKGVEDLFYE 182
E NY+F + +L +V HY+ QA+KQ NP+GL+ +GVE FYE
Sbjct: 2829 ELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYE 2886
>AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein.
Length = 3095
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +3
Query: 9 ERNYEFLSQKELIGQVQSHYTGQALKQXXXXXXXXXXXXNPYGLVVGLKKGVEDLFYE 182
E NY+F + +L +V HY+ QA+KQ NP+GL+ +GVE FYE
Sbjct: 2829 ELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYE 2886
>AB023203-1|BAA76830.1| 1458|Homo sapiens KIAA0986 protein protein.
Length = 1458
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +3
Query: 9 ERNYEFLSQKELIGQVQSHYTGQALKQXXXXXXXXXXXXNPYGLVVGLKKGVEDLFYE 182
E NY+F + +L +V HY+ QA+KQ NP+GL+ +GVE FYE
Sbjct: 1192 ELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYE 1249
>M61764-1|AAA52620.1| 451|Homo sapiens gamma-tubulin protein.
Length = 451
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 179 VEEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVV 63
V +++ LLQ N + +D QT H YI + + G V
Sbjct: 290 VLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEV 328
>CR407642-1|CAG28570.1| 451|Homo sapiens TUBG1 protein.
Length = 451
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 179 VEEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVV 63
V +++ LLQ N + +D QT H YI + + G V
Sbjct: 290 VLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEV 328
>BT019931-1|AAV38734.1| 451|Homo sapiens tubulin, gamma 1 protein.
Length = 451
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 179 VEEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVV 63
V +++ LLQ N + +D QT H YI + + G V
Sbjct: 290 VLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEV 328
>BC108739-1|AAI08740.1| 451|Homo sapiens tubulin, gamma 2 protein.
Length = 451
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 179 VEEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVV 63
V +++ LLQ N + +D QT H YI + + G V
Sbjct: 290 VLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEV 328
>BC051890-1|AAH51890.1| 451|Homo sapiens tubulin, gamma 2 protein.
Length = 451
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 179 VEEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVV 63
V +++ LLQ N + +D QT H YI + + G V
Sbjct: 290 VLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEV 328
>BC047501-1|AAH47501.1| 541|Homo sapiens zinc finger protein 329
protein.
Length = 541
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 47 RSSAKSLHRAGTQTAVCIGAGFG 115
R SA +L + GTQ A+C GFG
Sbjct: 48 RQSALTLEKPGTQEAICEYPGFG 70
>BC009670-1|AAH09670.1| 451|Homo sapiens tubulin, gamma 2 protein.
Length = 451
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 179 VEEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVV 63
V +++ LLQ N + +D QT H YI + + G V
Sbjct: 290 VLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEV 328
>BC000619-1|AAH00619.1| 451|Homo sapiens tubulin, gamma 1 protein.
Length = 451
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 179 VEEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVV 63
V +++ LLQ N + +D QT H YI + + G V
Sbjct: 290 VLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEV 328
>AK022324-1|BAB14012.1| 451|Homo sapiens protein ( Homo sapiens
cDNA FLJ12262 fis, clone MAMMA1001576, highly similar to
Human gamma-tubulin mRNA. ).
Length = 451
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 179 VEEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVV 63
V +++ LLQ N + +D QT H YI + + G V
Sbjct: 290 VLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEV 328
>AF225971-1|AAF34188.1| 451|Homo sapiens gamma-tubulin protein.
Length = 451
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 179 VEEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVV 63
V +++ LLQ N + +D QT H YI + + G V
Sbjct: 290 VLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEV 328
>AL442645-6|CAM17596.1| 1704|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1704
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 176 EEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVVTLHL 51
E + D LL KT T+ Q QH +I L EC+ + +
Sbjct: 387 ESLRDQLLVTIQKTFTYTR-TQAQHLFIILMECMKKITVFRM 427
>AL442645-5|CAM17595.1| 1322|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1322
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 176 EEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVVTLHL 51
E + D LL KT T+ Q QH +I L EC+ + +
Sbjct: 387 ESLRDQLLVTIQKTFTYTR-TQAQHLFIILMECMKKITVFRM 427
>AL442645-2|CAM17591.1| 1552|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1552
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 176 EEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVVTLHL 51
E + D LL KT T+ Q QH +I L EC+ + +
Sbjct: 233 ESLRDQLLVTIQKTFTYTR-TQAQHLFIILMECMKKITVFRM 273
>AL358786-6|CAM15782.1| 1704|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1704
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 176 EEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVVTLHL 51
E + D LL KT T+ Q QH +I L EC+ + +
Sbjct: 387 ESLRDQLLVTIQKTFTYTR-TQAQHLFIILMECMKKITVFRM 427
>AL358786-5|CAM15781.1| 1322|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1322
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 176 EEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVVTLHL 51
E + D LL KT T+ Q QH +I L EC+ + +
Sbjct: 387 ESLRDQLLVTIQKTFTYTR-TQAQHLFIILMECMKKITVFRM 427
>AL358786-2|CAM15777.1| 1552|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1552
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 176 EEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVVTLHL 51
E + D LL KT T+ Q QH +I L EC+ + +
Sbjct: 233 ESLRDQLLVTIQKTFTYTR-TQAQHLFIILMECMKKITVFRM 273
>AL356318-12|CAM13169.1| 1704|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1704
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 176 EEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVVTLHL 51
E + D LL KT T+ Q QH +I L EC+ + +
Sbjct: 387 ESLRDQLLVTIQKTFTYTR-TQAQHLFIILMECMKKITVFRM 427
>AL356318-11|CAM13168.1| 1322|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1322
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 176 EEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVVTLHL 51
E + D LL KT T+ Q QH +I L EC+ + +
Sbjct: 387 ESLRDQLLVTIQKTFTYTR-TQAQHLFIILMECMKKITVFRM 427
>AL356318-2|CAM13163.1| 1552|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1552
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 176 EEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVVTLHL 51
E + D LL KT T+ Q QH +I L EC+ + +
Sbjct: 233 ESLRDQLLVTIQKTFTYTR-TQAQHLFIILMECMKKITVFRM 273
>AL161913-2|CAM22746.1| 1704|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1704
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 176 EEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVVTLHL 51
E + D LL KT T+ Q QH +I L EC+ + +
Sbjct: 387 ESLRDQLLVTIQKTFTYTR-TQAQHLFIILMECMKKITVFRM 427
>AL161913-1|CAM22745.1| 1322|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1322
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 176 EEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVVTLHL 51
E + D LL KT T+ Q QH +I L EC+ + +
Sbjct: 387 ESLRDQLLVTIQKTFTYTR-TQAQHLFIILMECMKKITVFRM 427
>AL159990-10|CAM13096.1| 1704|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1704
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 176 EEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVVTLHL 51
E + D LL KT T+ Q QH +I L EC+ + +
Sbjct: 387 ESLRDQLLVTIQKTFTYTR-TQAQHLFIILMECMKKITVFRM 427
>AL159990-9|CAM13095.1| 1322|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1322
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 176 EEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVVTLHL 51
E + D LL KT T+ Q QH +I L EC+ + +
Sbjct: 387 ESLRDQLLVTIQKTFTYTR-TQAQHLFIILMECMKKITVFRM 427
>AL159990-2|CAM13090.1| 1552|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1552
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 176 EEILDALLQANNKTIRVTQDVQTQHQYIQLFECLPGVVTLHL 51
E + D LL KT T+ Q QH +I L EC+ + +
Sbjct: 233 ESLRDQLLVTIQKTFTYTR-TQAQHLFIILMECMKKITVFRM 273
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,517,833
Number of Sequences: 237096
Number of extensions: 481980
Number of successful extensions: 1296
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 76,859,062
effective HSP length: 40
effective length of database: 67,375,222
effective search space used: 1347504440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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