Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_B06
(280 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 153 1e-39
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 153 1e-39
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 153 1e-39
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 150 1e-38
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 24 0.94
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 23 1.6
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 23 1.6
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 1.6
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 23 1.6
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 23 2.2
AJ007394-1|CAA07489.1| 112|Anopheles gambiae mucin protein. 22 3.8
AF046924-1|AAC08530.1| 122|Anopheles gambiae mucin protein. 22 5.0
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 21 6.6
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 21 6.6
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 21 8.7
CR954256-9|CAJ14150.1| 872|Anopheles gambiae putative calcium/c... 21 8.7
AY062205-1|AAL58566.1| 154|Anopheles gambiae cytochrome P450 CY... 21 8.7
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 153 bits (371), Expect = 1e-39
Identities = 70/72 (97%), Positives = 72/72 (100%)
Frame = +2
Query: 65 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPI 280
SKRGILTLKYPI
Sbjct: 61 SKRGILTLKYPI 72
Score = 21.0 bits (42), Expect = 8.7
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = +3
Query: 99 TMAPACAKPVSPVTTRLAPSSRPSWVALATRVSWSAW 209
TM P A + T LAPS+ + +S W
Sbjct: 305 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 341
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 153 bits (371), Expect = 1e-39
Identities = 70/72 (97%), Positives = 72/72 (100%)
Frame = +2
Query: 65 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPI 280
SKRGILTLKYPI
Sbjct: 61 SKRGILTLKYPI 72
Score = 21.0 bits (42), Expect = 8.7
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = +3
Query: 99 TMAPACAKPVSPVTTRLAPSSRPSWVALATRVSWSAW 209
TM P A + T LAPS+ + +S W
Sbjct: 305 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 341
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 153 bits (371), Expect = 1e-39
Identities = 70/72 (97%), Positives = 72/72 (100%)
Frame = +2
Query: 65 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPI 280
SKRGILTLKYPI
Sbjct: 61 SKRGILTLKYPI 72
Score = 21.0 bits (42), Expect = 8.7
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = +3
Query: 99 TMAPACAKPVSPVTTRLAPSSRPSWVALATRVSWSAW 209
TM P A + T LAPS+ + +S W
Sbjct: 305 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 341
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 150 bits (363), Expect = 1e-38
Identities = 68/72 (94%), Positives = 69/72 (95%)
Frame = +2
Query: 65 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCDDD ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+YVGDEAQ
Sbjct: 1 MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60
Query: 245 SKRGILTLKYPI 280
SKRGILTLKYPI
Sbjct: 61 SKRGILTLKYPI 72
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 24.2 bits (50), Expect = 0.94
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEGL 222
G P PPG +G G +GL
Sbjct: 716 GPPGPPGFNGPKGDKGL 732
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEG 219
G+P PPG G G +G
Sbjct: 146 GTPGPPGYPGDVGPKG 161
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEGL 222
G P PG G G GL
Sbjct: 317 GEPGVPGLRGNDGIPGL 333
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 23.4 bits (48), Expect = 1.6
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 105 APACAKPVSPVTTRLAPSSRPSWVALATRVSWSAWDRRTLTS 230
APA AKP + APSS + + R S+ D ++ TS
Sbjct: 411 APATAKPTPKPIPKPAPSSETNGSSSQERGMESSDDAKSETS 452
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 23.4 bits (48), Expect = 1.6
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 105 APACAKPVSPVTTRLAPSSRPSWVALATRVSWSAWDRRTLTS 230
APA AKP + APSS + + R S+ D ++ TS
Sbjct: 411 APATAKPTPKPIPKPAPSSETNGSSSQERGMESSDDAKSETS 452
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 181 SPPGCHGRHGTEGLLRR**GPEQERYPH 264
+P CHGR GT+ + Q RY H
Sbjct: 2342 NPSLCHGREGTKSIFND--FIHQHRYSH 2367
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 23.4 bits (48), Expect = 1.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 60 PKCATTMLLRS*LTMAPACAKPVSPVTTRLAPSSR 164
P+ + ++ S + AP A+P P TTR AP R
Sbjct: 86 PQPSLAPVVPSSVVTAPP-ARPSQPPTTRFAPEPR 119
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 23.0 bits (47), Expect = 2.2
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 181 SPPGCHGRHGTEGLLRR**GPEQERYPH 264
+P CHGR GT+ + Q RY H
Sbjct: 2332 NPSLCHGREGTKSIFSD--FIHQHRYSH 2357
>AJ007394-1|CAA07489.1| 112|Anopheles gambiae mucin protein.
Length = 112
Score = 22.2 bits (45), Expect = 3.8
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 42 PTQKHTPKCATTMLLRS*LTMAPACAKPVSPVTTRLAPSSRPSWVALAT 188
PT P ATT + + T+AP V+P TT + + +A+
Sbjct: 25 PTTTVAP--ATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVAS 71
>AF046924-1|AAC08530.1| 122|Anopheles gambiae mucin protein.
Length = 122
Score = 21.8 bits (44), Expect = 5.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 42 PTQKHTPKCATTMLLRS*LTMAPACAKPVSPVTT 143
PT P ATT + + T+AP V+P TT
Sbjct: 25 PTTTVAP--ATTTVAPTTTTVAPTTTTTVAPTTT 56
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 21.4 bits (43), Expect = 6.6
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 38 RPDTKTHAKMCDDDVAALVVDNGSGMCKAGFAG 136
R K H + DD+ +GSG AG AG
Sbjct: 1493 RQRKKQHTESSDDENGGSGGGSGSGAGGAGSAG 1525
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEG 219
G P PG GR G +G
Sbjct: 541 GRPGAPGLPGRDGEKG 556
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +2
Query: 218 DSYVGDEAQSKRGILTLKY 274
DSY DEA+ G L Y
Sbjct: 101 DSYASDEARHSGGYLANPY 119
>CR954256-9|CAJ14150.1| 872|Anopheles gambiae putative
calcium/calmodulin-dependentprotein kinase, CAKI
protein.
Length = 872
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 47 CRDAVDIDSTAA 12
CRDA+D+ S+ A
Sbjct: 391 CRDAIDVISSTA 402
>AY062205-1|AAL58566.1| 154|Anopheles gambiae cytochrome P450
CYP4C26 protein.
Length = 154
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1
Query: 184 PPGCHGRH 207
P CHGRH
Sbjct: 126 PENCHGRH 133
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 334,191
Number of Sequences: 2352
Number of extensions: 6883
Number of successful extensions: 29
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 16604898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -