Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_B06
(280 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 156 2e-39
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 156 2e-39
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 156 2e-39
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 155 6e-39
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 155 6e-39
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 155 6e-39
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 155 6e-39
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 155 6e-39
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 155 6e-39
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 155 6e-39
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 155 6e-39
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 155 6e-39
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 145 4e-36
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 116 3e-27
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 72 5e-14
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 62 8e-11
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 56 4e-09
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 41 2e-04
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 34 0.017
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 31 0.12
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 30 0.21
Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical pr... 30 0.28
AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr prote... 30 0.28
Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 28 0.86
AL023837-1|CAA19499.1| 718|Caenorhabditis elegans Hypothetical ... 28 1.1
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 1.1
Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical pr... 27 2.0
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 27 2.0
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 27 2.0
Z81076-6|CAB03054.1| 387|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z81076-5|CAB03055.1| 389|Caenorhabditis elegans Hypothetical pr... 27 2.6
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 27 2.6
U53153-7|AAC69037.1| 1280|Caenorhabditis elegans Hypothetical pr... 26 3.5
L23651-12|AAA27958.1| 305|Caenorhabditis elegans Collagen prote... 26 3.5
AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen pro... 26 3.5
Z68159-3|CAD89733.1| 351|Caenorhabditis elegans Hypothetical pr... 26 4.6
Z68159-2|CAD89732.1| 354|Caenorhabditis elegans Hypothetical pr... 26 4.6
U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical pr... 26 4.6
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 26 4.6
U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protei... 26 4.6
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 25 6.1
Z68216-1|CAA92459.1| 493|Caenorhabditis elegans Hypothetical pr... 25 6.1
Z48006-4|CAA88048.1| 429|Caenorhabditis elegans Hypothetical pr... 25 6.1
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 25 6.1
AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen prot... 25 6.1
Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical pr... 25 8.0
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 25 8.0
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 25 8.0
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 25 8.0
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 25 8.0
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 25 8.0
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 25 8.0
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 25 8.0
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 25 8.0
AC025726-36|AAL27268.1| 487|Caenorhabditis elegans Hypothetical... 25 8.0
AC025726-35|AAL27267.1| 489|Caenorhabditis elegans Hypothetical... 25 8.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 156 bits (379), Expect = 2e-39
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 65 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPI 280
SKRGILTLKYPI
Sbjct: 61 SKRGILTLKYPI 72
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 156 bits (379), Expect = 2e-39
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 65 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPI 280
SKRGILTLKYPI
Sbjct: 61 SKRGILTLKYPI 72
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 156 bits (379), Expect = 2e-39
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 65 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPI 280
SKRGILTLKYPI
Sbjct: 61 SKRGILTLKYPI 72
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 155 bits (375), Expect = 6e-39
Identities = 71/72 (98%), Positives = 72/72 (100%)
Frame = +2
Query: 65 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPI 280
SKRGILTLKYPI
Sbjct: 61 SKRGILTLKYPI 72
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 155 bits (375), Expect = 6e-39
Identities = 71/72 (98%), Positives = 72/72 (100%)
Frame = +2
Query: 65 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPI 280
SKRGILTLKYPI
Sbjct: 61 SKRGILTLKYPI 72
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 155 bits (375), Expect = 6e-39
Identities = 71/72 (98%), Positives = 72/72 (100%)
Frame = +2
Query: 65 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPI 280
SKRGILTLKYPI
Sbjct: 61 SKRGILTLKYPI 72
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 155 bits (375), Expect = 6e-39
Identities = 71/72 (98%), Positives = 72/72 (100%)
Frame = +2
Query: 65 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPI 280
SKRGILTLKYPI
Sbjct: 61 SKRGILTLKYPI 72
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 155 bits (375), Expect = 6e-39
Identities = 70/72 (97%), Positives = 72/72 (100%)
Frame = +2
Query: 65 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPI 280
SKRGILTLKYPI
Sbjct: 61 SKRGILTLKYPI 72
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 155 bits (375), Expect = 6e-39
Identities = 71/72 (98%), Positives = 72/72 (100%)
Frame = +2
Query: 65 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPI 280
SKRGILTLKYPI
Sbjct: 61 SKRGILTLKYPI 72
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 155 bits (375), Expect = 6e-39
Identities = 71/72 (98%), Positives = 72/72 (100%)
Frame = +2
Query: 65 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPI 280
SKRGILTLKYPI
Sbjct: 61 SKRGILTLKYPI 72
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 155 bits (375), Expect = 6e-39
Identities = 71/72 (98%), Positives = 72/72 (100%)
Frame = +2
Query: 65 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPI 280
SKRGILTLKYPI
Sbjct: 61 SKRGILTLKYPI 72
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 155 bits (375), Expect = 6e-39
Identities = 71/72 (98%), Positives = 72/72 (100%)
Frame = +2
Query: 65 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKRGILTLKYPI 280
SKRGILTLKYPI
Sbjct: 61 SKRGILTLKYPI 72
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 145 bits (352), Expect = 4e-36
Identities = 66/70 (94%), Positives = 70/70 (100%)
Frame = +2
Query: 71 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 250
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 251 RGILTLKYPI 280
RGILTLKYPI
Sbjct: 62 RGILTLKYPI 71
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 116 bits (278), Expect = 3e-27
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +2
Query: 119 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 280
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 58
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 72.1 bits (169), Expect = 5e-14
Identities = 33/73 (45%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Frame = +2
Query: 71 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 241
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
Query: 242 QSKRGILTLKYPI 280
+S RG+ +++YP+
Sbjct: 62 ESNRGLFSIEYPM 74
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 61.7 bits (143), Expect = 8e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 197 MVGMGQKDSYVGDEAQSKRGILTLKYPI 280
MVGMGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPI 28
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 56.0 bits (129), Expect = 4e-09
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Frame = +2
Query: 89 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 262
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 263 TLKYPI 280
+ YP+
Sbjct: 69 DINYPM 74
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 40.7 bits (91), Expect = 2e-04
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Frame = +2
Query: 65 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 208
M + A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 209 GQKDSYVGDEAQSKRGI-LTLKYPI 280
D ++GDEA S T+KYPI
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPI 85
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 33.9 bits (74), Expect = 0.017
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 74 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 172
D+V+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 31.1 bits (67), Expect = 0.12
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 210 PMPTMTPWWRGRPTMDGKTARGASSPAKPALHMPEPL 100
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 30.3 bits (65), Expect = 0.21
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEGLLRR**GPEQER-YPHPEVP 276
G P P G G HGTEG + GPE + YP P P
Sbjct: 510 GPPGPMGLRGPHGTEGETGK-QGPEGSKGYPGPMGP 544
Score = 25.0 bits (52), Expect = 8.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEGL 222
G P PPG GR G GL
Sbjct: 181 GPPGPPGPAGRDGRHGL 197
Score = 25.0 bits (52), Expect = 8.0
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEG 219
G P PPG G HG G
Sbjct: 419 GPPGPPGPRGHHGPVG 434
>Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical
protein C41C4.4 protein.
Length = 967
Score = 29.9 bits (64), Expect = 0.28
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -1
Query: 193 TLVARATHDGREDGARRVVTGETGFAHAGA 104
T+V R T DGRE +RVV+ FAH A
Sbjct: 531 TVVYRGTFDGREVAVKRVVSEFVKFAHREA 560
>AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr protein
kinase protein.
Length = 967
Score = 29.9 bits (64), Expect = 0.28
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -1
Query: 193 TLVARATHDGREDGARRVVTGETGFAHAGA 104
T+V R T DGRE +RVV+ FAH A
Sbjct: 531 TVVYRGTFDGREVAVKRVVSEFVKFAHREA 560
>Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical
protein C30F2.1 protein.
Length = 307
Score = 28.3 bits (60), Expect = 0.86
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEGL 222
G P PPGC G G GL
Sbjct: 112 GPPGPPGCRGEPGPSGL 128
>AL023837-1|CAA19499.1| 718|Caenorhabditis elegans Hypothetical
protein Y37H2C.1 protein.
Length = 718
Score = 27.9 bits (59), Expect = 1.1
Identities = 17/75 (22%), Positives = 28/75 (37%)
Frame = +2
Query: 47 TKTHAKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 226
+K H D L++ +C GF G A + + G HQ + + +
Sbjct: 495 SKRHGMFVVDSSLRLIIKIVFSICSIGFTGYFAYKYFYERPSGLQSHQWICTPLSSQQKV 554
Query: 227 VGDEAQSKRGILTLK 271
+ D+ KR L K
Sbjct: 555 LEDDKNVKRRPLNSK 569
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 1.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 119 KAGFAGDDAPRAVFPSIVGRPRHQG 193
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical
protein C17G1.4b protein.
Length = 844
Score = 27.1 bits (57), Expect = 2.0
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEGL---LRR**GPEQERYPHPEVPH 279
G PS PG G HGT G L +Q++ H +PH
Sbjct: 366 GQPSTPGTPGSHGTVGSNAPLSHQKPSQQQQSMHNHLPH 404
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 27.1 bits (57), Expect = 2.0
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEGL---LRR**GPEQERYPHPEVPH 279
G PS PG G HGT G L +Q++ H +PH
Sbjct: 366 GQPSTPGTPGSHGTVGSNAPLSHQKPSQQQQSMHNHLPH 404
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 27.1 bits (57), Expect = 2.0
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEGLLRR**GPEQERYPHP 267
GS PG HGR G G+ + P YP P
Sbjct: 193 GSKGAPGTHGRQGMPGVRYQLGEPGPAGYPGP 224
>Z81076-6|CAB03054.1| 387|Caenorhabditis elegans Hypothetical
protein F35C5.5b protein.
Length = 387
Score = 26.6 bits (56), Expect = 2.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 1 ARGLAAVESISTASRHKNTRQNVRR 75
A+G+ A E + A R NTR+N ++
Sbjct: 125 AKGIGAAEQLLAAGRKNNTRKNYKQ 149
>Z81076-5|CAB03055.1| 389|Caenorhabditis elegans Hypothetical
protein F35C5.5a protein.
Length = 389
Score = 26.6 bits (56), Expect = 2.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 1 ARGLAAVESISTASRHKNTRQNVRR 75
A+G+ A E + A R NTR+N ++
Sbjct: 125 AKGIGAAEQLLAAGRKNNTRKNYKQ 149
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 26.6 bits (56), Expect = 2.6
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEGL 222
G P PPG G++GT G+
Sbjct: 250 GRPGPPGAPGKNGTPGV 266
>U53153-7|AAC69037.1| 1280|Caenorhabditis elegans Hypothetical
protein T19A5.1 protein.
Length = 1280
Score = 26.2 bits (55), Expect = 3.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 12 RCRRVNIHRVPTQKHTPKCATTML 83
+C+R I+R P H ATTM+
Sbjct: 468 KCQRAQINRFPATNHKLNWATTMI 491
>L23651-12|AAA27958.1| 305|Caenorhabditis elegans Collagen protein
90 protein.
Length = 305
Score = 26.2 bits (55), Expect = 3.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEGLL 225
G P PPG G+ G EG++
Sbjct: 96 GPPGPPGLPGKRGDEGVV 113
>AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen
protein 106 protein.
Length = 296
Score = 26.2 bits (55), Expect = 3.5
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEG 219
G P PPG +G++G +G
Sbjct: 219 GPPGPPGANGKNGKQG 234
Score = 25.8 bits (54), Expect = 4.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEG 219
G P P GC G GT+G
Sbjct: 144 GPPGPDGCAGEPGTDG 159
>Z68159-3|CAD89733.1| 351|Caenorhabditis elegans Hypothetical
protein C33D9.3b protein.
Length = 351
Score = 25.8 bits (54), Expect = 4.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 5 EVSLP*SQYPPRPDTKTHAKMCDDDVAALVVD 100
E++L S++ PD +AK C +AA+ D
Sbjct: 176 EITLEFSKFNQNPDPADYAKTCLQQIAAIDAD 207
>Z68159-2|CAD89732.1| 354|Caenorhabditis elegans Hypothetical
protein C33D9.3a protein.
Length = 354
Score = 25.8 bits (54), Expect = 4.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 5 EVSLP*SQYPPRPDTKTHAKMCDDDVAALVVD 100
E++L S++ PD +AK C +AA+ D
Sbjct: 179 EITLEFSKFNQNPDPADYAKTCLQQIAAIDAD 210
>U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical
protein T23H2.3 protein.
Length = 1009
Score = 25.8 bits (54), Expect = 4.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 63 KCATTMLLRS*LTMAPACAKPVSPVTTRLAPSSRP 167
KC+T RS + + KPV+P+T +L S P
Sbjct: 86 KCSTDDHYRSRSFIDNSFEKPVTPITKKLQESDEP 120
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein
110 protein.
Length = 304
Score = 25.8 bits (54), Expect = 4.6
Identities = 11/19 (57%), Positives = 12/19 (63%), Gaps = 3/19 (15%)
Frame = +1
Query: 172 GSPSP---PGCHGRHGTEG 219
G+P P PG HGRHG G
Sbjct: 106 GAPGPSGTPGRHGRHGAPG 124
>U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protein
173 protein.
Length = 325
Score = 25.8 bits (54), Expect = 4.6
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEGLLRR**GPEQERYPHPEVP 276
G P PPG G G G GP ++ P P P
Sbjct: 187 GPPGPPGLKGMPGIPGNQGEDAGPGRQGMPGPTGP 221
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 25.4 bits (53), Expect = 6.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEG 219
G+P PPG G+ G EG
Sbjct: 96 GAPGPPGNPGKRGDEG 111
Score = 25.4 bits (53), Expect = 6.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 99 TMAPACAKPVSPVTTRLAPSSRP 167
T AP P TTR AP+S+P
Sbjct: 318 TRAPPATTRAPPATTRPAPASQP 340
>Z68216-1|CAA92459.1| 493|Caenorhabditis elegans Hypothetical
protein F27C8.1 protein.
Length = 493
Score = 25.4 bits (53), Expect = 6.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 171 WVALATRVSWSAWDRRTLTSVMRP 242
W+A+ T ++ W RRT+ RP
Sbjct: 389 WLAIGTAIAALFWLRRTMPDASRP 412
>Z48006-4|CAA88048.1| 429|Caenorhabditis elegans Hypothetical
protein F19C6.3 protein.
Length = 429
Score = 25.4 bits (53), Expect = 6.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1
Query: 91 ERSNIVVAHFGVCFCVGTRWILT 23
+RS+ ++AH+ +G WILT
Sbjct: 21 DRSSYILAHYMNLLSIGESWILT 43
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 25.4 bits (53), Expect = 6.1
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEG 219
G P PPG G GT+G
Sbjct: 201 GPPGPPGTSGNPGTDG 216
>AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen protein
115 protein.
Length = 393
Score = 25.4 bits (53), Expect = 6.1
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEG 219
G P PPG HG G+ G
Sbjct: 282 GPPGPPGLHGSPGSYG 297
>Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical
protein F22D6.10 protein.
Length = 302
Score = 25.0 bits (52), Expect = 8.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEG 219
G P PPG G +GT+G
Sbjct: 98 GPPGPPGEPGENGTDG 113
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 25.0 bits (52), Expect = 8.0
Identities = 12/53 (22%), Positives = 25/53 (47%)
Frame = +2
Query: 80 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE 238
+ ++ DNG K G ++PR V P+ + + +H+ V + + D+
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLV-PNSIVKAKHEKKRVFVAHEQEECSDK 54
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 25.0 bits (52), Expect = 8.0
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEGLLRR**GPEQERYPHPEVP 276
G P PG G+ G G L P YP P+ P
Sbjct: 761 GEPGTPGYRGQPGEPGNLAYPGQPGDVGYPGPDGP 795
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 25.0 bits (52), Expect = 8.0
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEGLLRR**GPEQERYPHPEVP 276
G P PG G+ G G L P YP P+ P
Sbjct: 1018 GEPGTPGYRGQPGEPGNLAYPGQPGDVGYPGPDGP 1052
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 25.0 bits (52), Expect = 8.0
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEGLLRR**GPEQERYPHPEVP 276
G P PG G+ G G L P YP P+ P
Sbjct: 1017 GEPGTPGYRGQPGEPGNLAYPGQPGDVGYPGPDGP 1051
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 25.0 bits (52), Expect = 8.0
Identities = 12/53 (22%), Positives = 25/53 (47%)
Frame = +2
Query: 80 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE 238
+ ++ DNG K G ++PR V P+ + + +H+ V + + D+
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLV-PNSIVKAKHEKKRVFVAHEQEECSDK 54
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 25.0 bits (52), Expect = 8.0
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEG 219
G PP C GRHG G
Sbjct: 355 GRHGPPHCPGRHGRHG 370
Score = 25.0 bits (52), Expect = 8.0
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 172 GSPSPPGCHGRHGT 213
G P PG HGRHG+
Sbjct: 358 GPPHCPGRHGRHGS 371
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 25.0 bits (52), Expect = 8.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 172 GSPSPPGCHGRHGTEG 219
G P PPG GR G +G
Sbjct: 193 GPPGPPGYPGRQGCQG 208
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 25.0 bits (52), Expect = 8.0
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +3
Query: 60 PKCATTMLLRS*LTMAPACAKPVSPVTTRLAPSSRPSWVALATR 191
PK A R +AP A P S TR APS + VA R
Sbjct: 222 PKTAAGAPKRLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRR 265
>AC025726-36|AAL27268.1| 487|Caenorhabditis elegans Hypothetical
protein Y71G12B.1b protein.
Length = 487
Score = 25.0 bits (52), Expect = 8.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 129 SPVTTRLAPSSRPSWVALATRVSWSAWDR 215
SPVT L PS++ + + L R+ W A ++
Sbjct: 308 SPVTFSLLPSTKENHLGLPYRLLWIALNK 336
>AC025726-35|AAL27267.1| 489|Caenorhabditis elegans Hypothetical
protein Y71G12B.1a protein.
Length = 489
Score = 25.0 bits (52), Expect = 8.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 129 SPVTTRLAPSSRPSWVALATRVSWSAWDR 215
SPVT L PS++ + + L R+ W A ++
Sbjct: 310 SPVTFSLLPSTKENHLGLPYRLLWIALNK 338
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,249,092
Number of Sequences: 27780
Number of extensions: 151163
Number of successful extensions: 1157
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 248937694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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