Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_B05
(288 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VXE0 Cluster: Probable small nuclear ribonucleoprotei... 109 9e-24
UniRef50_P62308 Cluster: Small nuclear ribonucleoprotein G; n=46... 105 2e-22
UniRef50_Q9N4G9 Cluster: Probable small nuclear ribonucleoprotei... 91 3e-18
UniRef50_O74966 Cluster: Probable small nuclear ribonucleoprotei... 72 3e-12
UniRef50_Q54RX0 Cluster: LSM (Like-Sm) domain-containing protein... 65 3e-10
UniRef50_Q4PED8 Cluster: Putative uncharacterized protein; n=1; ... 64 6e-10
UniRef50_Q8IB57 Cluster: Small nuclear ribonucleoprotein, putati... 60 7e-09
UniRef50_Q677D4 Cluster: Small nuclear ribonucleoprotein polypep... 59 2e-08
UniRef50_Q00XA2 Cluster: Putative small nuclear ribonucleoprotei... 59 2e-08
UniRef50_A7TGG5 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-08
UniRef50_A2R8P2 Cluster: Function: snRPG of H. sapiens is associ... 58 3e-08
UniRef50_Q2URY1 Cluster: Predicted protein; n=1; Aspergillus ory... 56 1e-07
UniRef50_A7QWV4 Cluster: Chromosome chr13 scaffold_210, whole ge... 56 2e-07
UniRef50_Q5K900 Cluster: U6 snRNA binding protein, putative; n=1... 56 2e-07
UniRef50_Q7SDP3 Cluster: Putative uncharacterized protein NCU019... 56 2e-07
UniRef50_A4S1J9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 55 3e-07
UniRef50_Q6MY59 Cluster: U6 snrna-associated sm-like protein, pu... 55 3e-07
UniRef50_A6QY75 Cluster: Predicted protein; n=2; Fungi/Metazoa g... 55 3e-07
UniRef50_Q6CRN4 Cluster: Similar to sp|P40204 Saccharomyces cere... 54 5e-07
UniRef50_UPI0000D9E97B Cluster: PREDICTED: LSM7 homolog, U6 smal... 54 8e-07
UniRef50_Q9UK45 Cluster: U6 snRNA-associated Sm-like protein LSm... 54 8e-07
UniRef50_Q5CY65 Cluster: Putative uncharacterized protein; n=1; ... 53 1e-06
UniRef50_UPI000049841B Cluster: small nuclear ribonucleoprotein ... 51 4e-06
UniRef50_P53905 Cluster: U6 snRNA-associated Sm-like protein LSm... 50 7e-06
UniRef50_Q4Q5H5 Cluster: Small nuclear ribonucleoprotein, putati... 49 2e-05
UniRef50_Q4MYV9 Cluster: U6 snRNA-associated protein, putative; ... 49 2e-05
UniRef50_A0D0Y9 Cluster: Chromosome undetermined scaffold_33, wh... 48 4e-05
UniRef50_O74499 Cluster: U6 snRNP-associated protein Lsm7; n=19;... 47 9e-05
UniRef50_Q4Z0C4 Cluster: U6 snRNA-associated Sm-like protein, pu... 46 2e-04
UniRef50_A2GMH6 Cluster: Sm protein; n=3; Trichomonas vaginalis ... 45 3e-04
UniRef50_Q40942 Cluster: Small nucleolar ribonucleoprotein E hom... 45 4e-04
UniRef50_Q6BPZ2 Cluster: Debaryomyces hansenii chromosome E of s... 45 4e-04
UniRef50_A2Y859 Cluster: Putative uncharacterized protein; n=2; ... 43 0.001
UniRef50_Q8SRW7 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN G; n=1;... 43 0.001
UniRef50_Q4V6D7 Cluster: IP05148p; n=2; Drosophila melanogaster|... 42 0.002
UniRef50_Q2FT45 Cluster: Like-Sm ribonucleoprotein, core; n=3; M... 42 0.002
UniRef50_Q4N4E0 Cluster: Small nuclear ribonucleoprotein G, puta... 42 0.003
UniRef50_Q4PA95 Cluster: Putative uncharacterized protein; n=1; ... 42 0.003
UniRef50_A3LX11 Cluster: Predicted protein; n=3; Saccharomycetac... 42 0.003
UniRef50_A7PDU1 Cluster: Chromosome chr11 scaffold_13, whole gen... 41 0.005
UniRef50_A1DH91 Cluster: Small nuclear ribonucleoprotein (LSM1),... 41 0.005
UniRef50_P40018 Cluster: Small nuclear ribonucleoprotein-associa... 41 0.006
UniRef50_Q8ZYP8 Cluster: Small nuclear ribonucleoprotein homolog... 40 0.011
UniRef50_Q6DBW5 Cluster: Zgc:101136; n=6; Euteleostomi|Rep: Zgc:... 39 0.019
UniRef50_Q54W83 Cluster: Putative uncharacterized protein; n=1; ... 39 0.019
UniRef50_Q755T6 Cluster: AER432Cp; n=1; Eremothecium gossypii|Re... 39 0.019
UniRef50_Q979R0 Cluster: Small nuclear ribonucleoprotein; n=4; T... 39 0.019
UniRef50_O75243 Cluster: R30783_1; n=3; Mammalia|Rep: R30783_1 -... 39 0.024
UniRef50_Q6CGS0 Cluster: Similar to sp|P47017 Saccharomyces cere... 39 0.024
UniRef50_O74483 Cluster: U6 snRNA-associated Sm-like protein LSm... 39 0.024
UniRef50_O95777 Cluster: U6 snRNA-associated Sm-like protein LSm... 39 0.024
UniRef50_A4S5K5 Cluster: Predicted protein; n=1; Ostreococcus lu... 38 0.032
UniRef50_Q20229 Cluster: Putative uncharacterized protein lsm-1;... 38 0.032
UniRef50_A4VCU1 Cluster: Small nuclear ribonucleoprotein E, puta... 38 0.032
UniRef50_P47017 Cluster: Sm-like protein LSm1; n=11; Saccharomyc... 38 0.032
UniRef50_Q1HQ51 Cluster: LSM1-like protein; n=3; Endopterygota|R... 38 0.043
UniRef50_A7DR38 Cluster: Like-Sm ribonucleoprotein, core; n=1; C... 38 0.043
UniRef50_A3H6D3 Cluster: Like-Sm ribonucleoprotein, core; n=1; C... 38 0.043
UniRef50_Q701X8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.057
UniRef50_P87173 Cluster: Uncharacterized protein C3D6.08c; n=1; ... 38 0.057
UniRef50_O15116 Cluster: U6 snRNA-associated Sm-like protein LSm... 38 0.057
UniRef50_Q01J34 Cluster: OSIGBa0140O07.9 protein; n=5; Oryza sat... 37 0.075
UniRef50_Q4UHZ4 Cluster: (U6) snRNA-associated Sm-like protein, ... 37 0.075
UniRef50_Q8TYS2 Cluster: Small nuclear ribonucleoprotein (SnRNP)... 37 0.075
UniRef50_Q9UUI1 Cluster: U6 snRNA-associated Sm-like protein LSm... 37 0.099
UniRef50_P57743 Cluster: U6 snRNA-associated Sm-like protein LSm... 37 0.099
UniRef50_Q05E36 Cluster: Putative small nucleolar RNP protein Sm... 36 0.17
UniRef50_A3DMZ9 Cluster: Like-Sm ribonucleoprotein, core; n=1; S... 36 0.17
UniRef50_O26745 Cluster: Putative snRNP Sm-like protein; n=4; Eu... 36 0.17
UniRef50_P62312 Cluster: U6 snRNA-associated Sm-like protein LSm... 36 0.17
UniRef50_P40089 Cluster: U6 snRNA-associated Sm-like protein LSm... 36 0.17
UniRef50_Q7QZM9 Cluster: GLP_680_47464_47838; n=1; Giardia lambl... 36 0.23
UniRef50_A4VDT4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.23
UniRef50_Q6CWY1 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 36 0.23
UniRef50_Q5CQ90 Cluster: Small nuclear ribonucleoprotein U6; n=1... 35 0.30
UniRef50_Q4Q9J1 Cluster: Lsm7p protein, putative; n=6; Trypanoso... 35 0.30
UniRef50_Q17E06 Cluster: Small nuclear ribonucleoprotein, core, ... 35 0.30
UniRef50_A2FZR2 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 35 0.40
UniRef50_A0D2M7 Cluster: Chromosome undetermined scaffold_35, wh... 35 0.40
UniRef50_Q5KN63 Cluster: Sm-like protein, putative; n=1; Filobas... 35 0.40
UniRef50_Q0UX37 Cluster: Predicted protein; n=1; Phaeosphaeria n... 34 0.53
UniRef50_A7TII8 Cluster: Putative uncharacterized protein; n=1; ... 34 0.53
UniRef50_Q9Y4Y9 Cluster: U6 snRNA-associated Sm-like protein LSm... 34 0.53
UniRef50_Q98S49 Cluster: Small nuclear ribonucleoprotein F; n=1;... 34 0.70
UniRef50_Q6BR90 Cluster: Similar to CA5853|CaLSM6 Candida albica... 34 0.70
UniRef50_A1CDT1 Cluster: Small nuclear ribonucleoprotein SmE, pu... 34 0.70
UniRef50_Q8ZYG5 Cluster: Small nuclear ribonucleoprotein homolog... 34 0.70
UniRef50_Q0WMZ9 Cluster: Sm-like protein; n=19; Eukaryota|Rep: S... 33 0.92
UniRef50_Q6BQK4 Cluster: Similar to CA3420|CaSMX4 Candida albica... 33 0.92
UniRef50_Q0ULJ4 Cluster: Putative uncharacterized protein; n=1; ... 33 0.92
UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4; Th... 33 0.92
UniRef50_Q4MZX3 Cluster: Small nuclear ribonucleoprotein, putati... 33 1.2
UniRef50_Q8SRU9 Cluster: U6 snRNA-ASSOCIATED SMALL RIBONUCLEOPRO... 33 1.2
UniRef50_Q6CX51 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 33 1.2
UniRef50_Q9LMB5 Cluster: F14D16.28; n=6; core eudicotyledons|Rep... 33 1.6
UniRef50_A2E014 Cluster: Sm protein; n=2; Trichomonas vaginalis ... 33 1.6
UniRef50_Q74ZR8 Cluster: AGR130Wp; n=2; Saccharomycetales|Rep: A... 33 1.6
UniRef50_Q6FJA6 Cluster: Similar to sp|P47093 Saccharomyces cere... 33 1.6
UniRef50_Q4P7M4 Cluster: Putative uncharacterized protein; n=1; ... 33 1.6
UniRef50_Q7QPB0 Cluster: GLP_122_3813_3433; n=1; Giardia lamblia... 32 2.1
UniRef50_Q4MZU2 Cluster: U6 snRNA-associated Sm-like protein LSm... 32 2.1
UniRef50_A7TI36 Cluster: Putative uncharacterized protein; n=1; ... 32 2.1
UniRef50_A1CE19 Cluster: LSM domain protein; n=3; Trichocomaceae... 32 2.1
UniRef50_Q9HPS2 Cluster: SnRNP homolog; n=2; Halobacteriaceae|Re... 32 2.1
UniRef50_Q9W087 Cluster: CG2021-PA; n=14; Eukaryota|Rep: CG2021-... 32 2.8
UniRef50_Q8IIJ2 Cluster: Tyrosine--tRNA ligase, putative; n=5; E... 32 2.8
UniRef50_O29386 Cluster: Putative snRNP Sm-like protein; n=10; A... 32 2.8
UniRef50_Q12330 Cluster: Small nuclear ribonucleoprotein E; n=3;... 32 2.8
UniRef50_UPI0000499A4F Cluster: small nuclear ribonucleoprotein ... 31 3.7
UniRef50_Q6QA14 Cluster: Lsm8p; n=6; Trypanosomatidae|Rep: Lsm8p... 31 3.7
UniRef50_A7AQW8 Cluster: Small nuclear ribonucleoprotein F, puta... 31 3.7
UniRef50_Q9YEQ5 Cluster: Putative snRNP Sm-like protein; n=1; Ae... 31 3.7
UniRef50_Q116G3 Cluster: Orn/Lys/Arg decarboxylase, major region... 31 4.9
UniRef50_Q9FI15 Cluster: Similarity to small nuclear ribonucleop... 31 4.9
UniRef50_O94488 Cluster: MT organizer Mto1; n=1; Schizosaccharom... 31 4.9
UniRef50_A2X0E3 Cluster: Putative uncharacterized protein; n=2; ... 31 6.5
UniRef50_A7ARJ0 Cluster: Small nuclear ribonucleoprotein F, puta... 31 6.5
UniRef50_A3FQK4 Cluster: Small nuclear ribonucleoprotein, putati... 31 6.5
UniRef50_A0C1J5 Cluster: Chromosome undetermined scaffold_142, w... 31 6.5
UniRef50_A4RQ29 Cluster: U6 snRNA-associated Sm-like protein LSm... 31 6.5
UniRef50_Q10163 Cluster: Uncharacterized protein C26A3.08; n=38;... 31 6.5
UniRef50_Q9SUM2 Cluster: Probable small nuclear ribonucleoprotei... 31 6.5
UniRef50_P62304 Cluster: Small nuclear ribonucleoprotein E; n=51... 31 6.5
UniRef50_Q5KWM7 Cluster: Hypothetical conserved protein; n=2; Ge... 30 8.6
UniRef50_Q5KRD7 Cluster: Putative uncharacterized protein; n=2; ... 30 8.6
UniRef50_A3BPN8 Cluster: Putative uncharacterized protein; n=1; ... 30 8.6
UniRef50_Q8IL38 Cluster: Small nuclear ribonuclear protein, puta... 30 8.6
UniRef50_Q75BR7 Cluster: ACR204Cp; n=2; Saccharomycetales|Rep: A... 30 8.6
UniRef50_Q5K712 Cluster: U6 snRNA-associated sm-like protein lsm... 30 8.6
UniRef50_Q4WP21 Cluster: Small nuclear ribonucleoprotein SmB, pu... 30 8.6
UniRef50_Q0UQD0 Cluster: Putative uncharacterized protein; n=1; ... 30 8.6
>UniRef50_Q9VXE0 Cluster: Probable small nuclear ribonucleoprotein
G; n=14; Eukaryota|Rep: Probable small nuclear
ribonucleoprotein G - Drosophila melanogaster (Fruit
fly)
Length = 76
Score = 109 bits (263), Expect = 9e-24
Identities = 46/60 (76%), Positives = 56/60 (93%)
Frame = +2
Query: 107 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNIGMV 286
MSKAHPPE+KK+MDK++ +KLN GRAVTG+LRGFDPFMN+VLD++VEECKD +NNIGMV
Sbjct: 1 MSKAHPPEVKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNNIGMV 60
>UniRef50_P62308 Cluster: Small nuclear ribonucleoprotein G; n=46;
Eukaryota|Rep: Small nuclear ribonucleoprotein G - Homo
sapiens (Human)
Length = 76
Score = 105 bits (252), Expect = 2e-22
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +2
Query: 107 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNIGMV 286
MSKAHPPELKKFMDKKLS+KLN GR V G+LRGFDPFMNLV+DE VE GQ+NNIGMV
Sbjct: 1 MSKAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMV 60
>UniRef50_Q9N4G9 Cluster: Probable small nuclear ribonucleoprotein
G; n=16; Bilateria|Rep: Probable small nuclear
ribonucleoprotein G - Caenorhabditis elegans
Length = 77
Score = 91.5 bits (217), Expect = 3e-18
Identities = 39/59 (66%), Positives = 49/59 (83%)
Frame = +2
Query: 107 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNIGM 283
MSK HPPELKK+MDK++ +KLN R V+G+LRGFDPFMN+V+DE+VE KDG N+GM
Sbjct: 1 MSKTHPPELKKYMDKEMDLKLNGNRRVSGILRGFDPFMNMVIDEAVEYQKDGGSVNLGM 59
>UniRef50_O74966 Cluster: Probable small nuclear ribonucleoprotein
G; n=7; Ascomycota|Rep: Probable small nuclear
ribonucleoprotein G - Schizosaccharomyces pombe (Fission
yeast)
Length = 77
Score = 71.7 bits (168), Expect = 3e-12
Identities = 31/60 (51%), Positives = 47/60 (78%)
Frame = +2
Query: 107 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNIGMV 286
MSKA P+LKK++D+++ ++LN R V GVLRG+D F+N+VL++S+EE DG++ IG V
Sbjct: 1 MSKAGAPDLKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIEEKVDGEKVKIGSV 60
>UniRef50_Q54RX0 Cluster: LSM (Like-Sm) domain-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: LSM (Like-Sm)
domain-containing protein - Dictyostelium discoideum AX4
Length = 85
Score = 64.9 bits (151), Expect = 3e-10
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +2
Query: 113 KAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNIGMV 286
K P+L K +DKKL+IKLN R V G+LRGFD FMN+ L ++VE ++ IGMV
Sbjct: 5 KQADPDLTKLLDKKLAIKLNGNRTVHGILRGFDTFMNIALKDTVEVVSPTEKYEIGMV 62
>UniRef50_Q4PED8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 134
Score = 64.1 bits (149), Expect = 6e-10
Identities = 24/48 (50%), Positives = 38/48 (79%)
Frame = +2
Query: 107 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEE 250
M+K PELK+F+DK++++ + GR + G LRGFD F+NLV+DE++E+
Sbjct: 48 MAKVSQPELKRFLDKRIAVNIQGGRKIQGTLRGFDMFLNLVVDEAIEQ 95
>UniRef50_Q8IB57 Cluster: Small nuclear ribonucleoprotein, putative;
n=8; Eukaryota|Rep: Small nuclear ribonucleoprotein,
putative - Plasmodium falciparum (isolate 3D7)
Length = 83
Score = 60.5 bits (140), Expect = 7e-09
Identities = 31/61 (50%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Frame = +2
Query: 107 MSKAHPP-ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNIGM 283
+ KA P + +KFM+K+L I LN R V G+LRG+D FMNLVLD ++E KD ++ +IG+
Sbjct: 5 VGKAGPASDFRKFMEKRLQIYLNGNRQVVGILRGYDTFMNLVLDNTMEIKKD-EQIDIGV 63
Query: 284 V 286
V
Sbjct: 64 V 64
>UniRef50_Q677D4 Cluster: Small nuclear ribonucleoprotein
polypeptide G; n=1; Hyacinthus orientalis|Rep: Small
nuclear ribonucleoprotein polypeptide G - Hyacinthus
orientalis (Common hyacinth)
Length = 96
Score = 59.3 bits (137), Expect = 2e-08
Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +2
Query: 110 SKAHPPELKKFMD-KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNIGMV 286
+ PP LK+ KL IKLNA R V G LRGFD FMNLV+D ++ E +N+IGMV
Sbjct: 18 ASGQPPALKQVHGTSKLQIKLNANRVVVGTLRGFDQFMNLVIDNTM-EVNGNDKNDIGMV 76
>UniRef50_Q00XA2 Cluster: Putative small nuclear ribonucleoprotein
E; n=1; Ostreococcus tauri|Rep: Putative small nuclear
ribonucleoprotein E - Ostreococcus tauri
Length = 101
Score = 59.3 bits (137), Expect = 2e-08
Identities = 26/50 (52%), Positives = 38/50 (76%)
Frame = +2
Query: 137 KFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNIGMV 286
++MDKKL ++LN R+VTG+LRGFD F+NLVLD+S + ++ +GMV
Sbjct: 29 RYMDKKLRLRLNGNRSVTGILRGFDQFLNLVLDDSTNDTTT-EKTPMGMV 77
>UniRef50_A7TGG5 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 126
Score = 58.4 bits (135), Expect = 3e-08
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +2
Query: 128 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNI 277
+L K+ D K+ +KL GR VTGVL+G+DP M LVLDE+VE +D + ++I
Sbjct: 40 DLAKYKDTKIRVKLMGGRLVTGVLKGYDPLMTLVLDETVEYLRDLEDSSI 89
>UniRef50_A2R8P2 Cluster: Function: snRPG of H. sapiens is
associated with small nuclear ribonucleoproteins; n=1;
Aspergillus niger|Rep: Function: snRPG of H. sapiens is
associated with small nuclear ribonucleoproteins -
Aspergillus niger
Length = 105
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/59 (42%), Positives = 43/59 (72%)
Frame = +2
Query: 110 SKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNIGMV 286
++A+ +++M+K++ +LN R V G+LRG+D FMN+VLDE+ EE + G++ IGM+
Sbjct: 12 TEANIAVFQQYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGEKVAIGMI 70
>UniRef50_Q2URY1 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 122
Score = 56.4 bits (130), Expect = 1e-07
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = +2
Query: 143 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNIGMV 286
M+K++ +LN R V G+LRG+D FMN+VLDE+ EE + G++ IGMV
Sbjct: 1 MEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGEKVAIGMV 48
>UniRef50_A7QWV4 Cluster: Chromosome chr13 scaffold_210, whole
genome shotgun sequence; n=8; Eukaryota|Rep: Chromosome
chr13 scaffold_210, whole genome shotgun sequence -
Vitis vinifera (Grape)
Length = 113
Score = 56.0 bits (129), Expect = 2e-07
Identities = 24/44 (54%), Positives = 33/44 (75%)
Frame = +2
Query: 128 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKD 259
+L KF+DK + +KL GR VTG L+G+D +NLVLDE+VE +D
Sbjct: 24 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD 67
>UniRef50_Q5K900 Cluster: U6 snRNA binding protein, putative; n=1;
Filobasidiella neoformans|Rep: U6 snRNA binding protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 131
Score = 56.0 bits (129), Expect = 2e-07
Identities = 24/53 (45%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ-RNNIGMV 286
L +F+DK + +K GR TG+L+G+D MNLV+D+ VEE +DG+ ++G+V
Sbjct: 29 LAQFVDKSIRVKFMGGREATGILKGYDQLMNLVMDDVVEEYEDGRPTRSLGLV 81
>UniRef50_Q7SDP3 Cluster: Putative uncharacterized protein
NCU01930.1; n=2; Sordariomycetes|Rep: Putative
uncharacterized protein NCU01930.1 - Neurospora crassa
Length = 132
Score = 55.6 bits (128), Expect = 2e-07
Identities = 24/45 (53%), Positives = 35/45 (77%)
Frame = +2
Query: 128 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDG 262
+LKK+MD+++++K N GR VTG L+G+D MNLVLD+ V+E G
Sbjct: 57 DLKKYMDQRITVKFNGGREVTGTLKGYDALMNLVLDD-VQEAVRG 100
>UniRef50_A4S1J9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 100
Score = 55.2 bits (127), Expect = 3e-07
Identities = 21/46 (45%), Positives = 35/46 (76%)
Frame = +2
Query: 128 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ 265
+L +F+D+ + +KL+ GR VTG L+G+D +NLVLDE++E +D +
Sbjct: 9 DLARFIDRGVRVKLSGGREVTGTLKGYDQLLNLVLDEAIEHLRDAE 54
>UniRef50_Q6MY59 Cluster: U6 snrna-associated sm-like protein,
putative (Small nuclear ribonucleoprotein (LSM7),
putative); n=2; Pezizomycotina|Rep: U6 snrna-associated
sm-like protein, putative (Small nuclear
ribonucleoprotein (LSM7), putative) - Aspergillus
fumigatus (Sartorya fumigata)
Length = 134
Score = 55.2 bits (127), Expect = 3e-07
Identities = 23/50 (46%), Positives = 35/50 (70%)
Frame = +2
Query: 128 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNI 277
+L K+MDK++ +K N GR V+G+L+G+D MNLVLD+ E + N+I
Sbjct: 54 DLSKYMDKEVKVKFNGGREVSGMLKGYDQLMNLVLDDVKESMRGKSLNDI 103
>UniRef50_A6QY75 Cluster: Predicted protein; n=2; Fungi/Metazoa
group|Rep: Predicted protein - Ajellomyces capsulatus
NAm1
Length = 171
Score = 54.8 bits (126), Expect = 3e-07
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +2
Query: 128 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRN 271
+L K+M+K++ +K N GR VTG L+G+D MNLVLD+ E +D + N
Sbjct: 86 DLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVREVMRDDEGN 133
>UniRef50_Q6CRN4 Cluster: Similar to sp|P40204 Saccharomyces
cerevisiae YFL017wa SNP2 snRNP G protein; n=1;
Kluyveromyces lactis|Rep: Similar to sp|P40204
Saccharomyces cerevisiae YFL017wa SNP2 snRNP G protein -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 71
Score = 54.4 bits (125), Expect = 5e-07
Identities = 21/44 (47%), Positives = 34/44 (77%)
Frame = +2
Query: 134 KKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ 265
K++MDKKL ++LN R + G+LRG+D F+NLVLD ++ ++G+
Sbjct: 5 KQYMDKKLILQLNGNRKIIGILRGYDAFLNLVLDNPIQIFEEGE 48
>UniRef50_UPI0000D9E97B Cluster: PREDICTED: LSM7 homolog, U6 small
nuclear RNA associated (S. cerevisiae); n=1; Macaca
mulatta|Rep: PREDICTED: LSM7 homolog, U6 small nuclear
RNA associated (S. cerevisiae) - Macaca mulatta
Length = 123
Score = 53.6 bits (123), Expect = 8e-07
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = +2
Query: 128 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKD 259
+L K++DK + +K GR +G+L+GFDP +NLVLD ++E +D
Sbjct: 14 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRD 57
>UniRef50_Q9UK45 Cluster: U6 snRNA-associated Sm-like protein LSm7;
n=26; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm7 - Homo sapiens (Human)
Length = 103
Score = 53.6 bits (123), Expect = 8e-07
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = +2
Query: 128 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKD 259
+L K++DK + +K GR +G+L+GFDP +NLVLD ++E +D
Sbjct: 14 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRD 57
>UniRef50_Q5CY65 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 73
Score = 52.8 bits (121), Expect = 1e-06
Identities = 27/54 (50%), Positives = 34/54 (62%)
Frame = +2
Query: 86 YLI*DFNMSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
YL + MS L KF +K++ +KL GR V G+LRGFD NLVLDE+VE
Sbjct: 9 YLSFNIEMSSKSILGLNKFNNKEIKVKLCGGREVIGILRGFDAVTNLVLDETVE 62
>UniRef50_UPI000049841B Cluster: small nuclear ribonucleoprotein G;
n=2; Entamoeba histolytica HM-1:IMSS|Rep: small nuclear
ribonucleoprotein G - Entamoeba histolytica HM-1:IMSS
Length = 81
Score = 51.2 bits (117), Expect = 4e-06
Identities = 19/41 (46%), Positives = 33/41 (80%)
Frame = +2
Query: 125 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
PELK +++K++ +K++ R++ GVL G+D +MNLVLDE+ +
Sbjct: 6 PELKHYLEKRILVKIHGKRSIIGVLSGYDEYMNLVLDEAYD 46
>UniRef50_P53905 Cluster: U6 snRNA-associated Sm-like protein LSm7;
n=6; Saccharomycetales|Rep: U6 snRNA-associated Sm-like
protein LSm7 - Saccharomyces cerevisiae (Baker's yeast)
Length = 115
Score = 50.4 bits (115), Expect = 7e-06
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = +2
Query: 128 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
+L K+ D K+ +KL G+ V GVL+G+D MNLVLD++VE
Sbjct: 29 DLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVE 68
>UniRef50_Q4Q5H5 Cluster: Small nuclear ribonucleoprotein, putative;
n=5; Trypanosomatidae|Rep: Small nuclear
ribonucleoprotein, putative - Leishmania major
Length = 81
Score = 49.2 bits (112), Expect = 2e-05
Identities = 18/45 (40%), Positives = 34/45 (75%)
Frame = +2
Query: 125 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKD 259
P L FM+K++ +K+ GR+++GVLRG D M++VL ++++E ++
Sbjct: 8 PNLNHFMEKRIVVKIQGGRSISGVLRGVDEHMSIVLHDAMDETRN 52
>UniRef50_Q4MYV9 Cluster: U6 snRNA-associated protein, putative;
n=2; Theileria|Rep: U6 snRNA-associated protein,
putative - Theileria parva
Length = 104
Score = 49.2 bits (112), Expect = 2e-05
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 8/60 (13%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKD--------GQRNNIGMV 286
L K ++K++ +K + GR V GVLRG D NLVLD++VE KD G++ N+G++
Sbjct: 17 LNKHLNKEVYVKFSGGREVKGVLRGHDAMSNLVLDDTVEYLKDSSDSSKLTGEKRNLGLL 76
>UniRef50_A0D0Y9 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_33,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 104
Score = 48.0 bits (109), Expect = 4e-05
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +2
Query: 113 KAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
+ + +L K+ K+L IKLNA R + G + GFD FMNLVLD E
Sbjct: 12 QGYQADLNKYFGKRLKIKLNAKRTIIGTVIGFDIFMNLVLDHCKE 56
>UniRef50_O74499 Cluster: U6 snRNP-associated protein Lsm7; n=19;
Eukaryota|Rep: U6 snRNP-associated protein Lsm7 -
Schizosaccharomyces pombe (Fission yeast)
Length = 113
Score = 46.8 bits (106), Expect = 9e-05
Identities = 17/44 (38%), Positives = 30/44 (68%)
Frame = +2
Query: 128 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKD 259
+L ++ D+++ GR +TG+L+GFD MNLVLD+ E+ ++
Sbjct: 27 DLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRN 70
>UniRef50_Q4Z0C4 Cluster: U6 snRNA-associated Sm-like protein,
putative; n=4; Plasmodium|Rep: U6 snRNA-associated
Sm-like protein, putative - Plasmodium berghei
Length = 108
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/44 (45%), Positives = 30/44 (68%)
Frame = +2
Query: 128 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKD 259
++KKFM++K+ +K + GR V G L G D NLVLD++ E +D
Sbjct: 20 DIKKFMNQKIRVKFDGGREVVGNLIGHDAIFNLVLDKTEEFIRD 63
>UniRef50_A2GMH6 Cluster: Sm protein; n=3; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 81
Score = 45.2 bits (102), Expect = 3e-04
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = +2
Query: 107 MSKAHPP--ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDES 241
M++A PP ELK + KK+ I N R V+G+L GFD FMNL + ++
Sbjct: 5 MTQAQPPYPELKGHLQKKVKIMSNKDREVSGILTGFDHFMNLTIRDA 51
>UniRef50_Q40942 Cluster: Small nucleolar ribonucleoprotein E
homolog; n=2; Bigelowiella natans|Rep: Small nucleolar
ribonucleoprotein E homolog - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 71
Score = 44.8 bits (101), Expect = 4e-04
Identities = 19/43 (44%), Positives = 31/43 (72%)
Frame = +2
Query: 113 KAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDES 241
K + P+LK FM++++ I+L + G LRGFD F+N+VL++S
Sbjct: 4 KINIPDLKLFMEEEIQIQLKNKLCLKGTLRGFDQFLNIVLEKS 46
>UniRef50_Q6BPZ2 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=1;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 78
Score = 44.8 bits (101), Expect = 4e-04
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +2
Query: 128 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECK 256
+L + DK++ +K GR V GVL+GFD MNLVL++ E +
Sbjct: 34 DLNNYKDKQIRVKFIGGRQVIGVLKGFDQLMNLVLEDVKENIR 76
>UniRef50_A2Y859 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 141
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +2
Query: 125 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
P L+ +D+ +S+ N GR + G LRGFD N++LDES E
Sbjct: 6 PGLESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHE 46
>UniRef50_Q8SRW7 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN G; n=1;
Encephalitozoon cuniculi|Rep: SMALL NUCLEAR
RIBONUCLEOPROTEIN G - Encephalitozoon cuniculi
Length = 78
Score = 43.2 bits (97), Expect = 0.001
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +2
Query: 107 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
M K+ P L + K++ +++ G + G+L G+D FMN+VL E E
Sbjct: 1 MGKSAVPNLASLLHKRIVVRIGGGHTLKGLLTGYDAFMNIVLSEVTE 47
>UniRef50_Q4V6D7 Cluster: IP05148p; n=2; Drosophila
melanogaster|Rep: IP05148p - Drosophila melanogaster
(Fruit fly)
Length = 99
Score = 42.3 bits (95), Expect = 0.002
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +2
Query: 143 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQR 268
+DKKL + L GR + G LR D F NLVL ++E GQR
Sbjct: 34 VDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIPCGQR 75
>UniRef50_Q2FT45 Cluster: Like-Sm ribonucleoprotein, core; n=3;
Methanomicrobiales|Rep: Like-Sm ribonucleoprotein, core
- Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 80
Score = 42.3 bits (95), Expect = 0.002
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +2
Query: 161 IKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNIG 280
I L GR + GVL+G+D MNLVLD++ EE GQ +IG
Sbjct: 25 ISLKGGREIKGVLQGYDVHMNLVLDKA-EEIVQGQAQSIG 63
>UniRef50_Q4N4E0 Cluster: Small nuclear ribonucleoprotein G,
putative; n=2; Piroplasmida|Rep: Small nuclear
ribonucleoprotein G, putative - Theileria parva
Length = 86
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2
Query: 161 IKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ 265
+ LN R V GVLRG+D FMN+VLD ++E + Q
Sbjct: 27 VHLNGSRHVVGVLRGYDTFMNIVLDNALEVVGEDQ 61
>UniRef50_Q4PA95 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 148
Score = 41.5 bits (93), Expect = 0.003
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +2
Query: 143 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQR 268
+DKK+ + L G+ + GVLR +D F NLVL ++VE G R
Sbjct: 22 VDKKMLVVLRDGKKLIGVLRSYDQFANLVLQDTVERVFVGNR 63
>UniRef50_A3LX11 Cluster: Predicted protein; n=3;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 92
Score = 41.5 bits (93), Expect = 0.003
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +2
Query: 107 MSKAHPPELK--KFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKD 259
M+ A P L +F+ L + + GR VTG+L DPF NL+L +EE +D
Sbjct: 1 MASASNPSLTPDQFIGSNLRVAIKDGRVVTGILTVIDPFGNLLLSNVIEESED 53
>UniRef50_A7PDU1 Cluster: Chromosome chr11 scaffold_13, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr11 scaffold_13, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 242
Score = 41.1 bits (92), Expect = 0.005
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
L ++DKKL + L GR + GVLR FD F N VL+ + E
Sbjct: 15 LASYLDKKLLVLLRDGRKLLGVLRSFDQFANAVLEGACE 53
Score = 33.9 bits (74), Expect = 0.70
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 149 KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
+KL + L GR + GVLR FD F N VL+ + E
Sbjct: 135 EKLLVLLRDGRKLLGVLRSFDQFANAVLEGACE 167
>UniRef50_A1DH91 Cluster: Small nuclear ribonucleoprotein (LSM1),
putative; n=11; Pezizomycotina|Rep: Small nuclear
ribonucleoprotein (LSM1), putative - Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 177
Score = 41.1 bits (92), Expect = 0.005
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +2
Query: 128 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDG 262
+L DKKL + L GR + GVLR +D F NLVL +++E G
Sbjct: 52 QLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAG 96
>UniRef50_P40018 Cluster: Small nuclear ribonucleoprotein-associated
protein B; n=4; Saccharomycetales|Rep: Small nuclear
ribonucleoprotein-associated protein B - Saccharomyces
cerevisiae (Baker's yeast)
Length = 196
Score = 40.7 bits (91), Expect = 0.006
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = +2
Query: 116 AHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEE 250
AH L +D KL + GR G L FD MNLVL+E +EE
Sbjct: 7 AHSSRLANLIDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIEE 51
>UniRef50_Q8ZYP8 Cluster: Small nuclear ribonucleoprotein homolog;
n=4; Pyrobaculum|Rep: Small nuclear ribonucleoprotein
homolog - Pyrobaculum aerophilum
Length = 85
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ 265
L K ++K++ +L G AV GVL +D MNLVL+++ E K G+
Sbjct: 16 LTKMLNKEIIARLKGGVAVKGVLTAYDGCMNLVLNDAAELDKSGE 60
>UniRef50_Q6DBW5 Cluster: Zgc:101136; n=6; Euteleostomi|Rep:
Zgc:101136 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 133
Score = 39.1 bits (87), Expect = 0.019
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +2
Query: 143 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQR 268
+DKK + L GR + G+LR D F NLVL ++VE G++
Sbjct: 14 IDKKHLVLLRDGRTLIGILRSIDQFANLVLHQTVERIHVGKK 55
>UniRef50_Q54W83 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 129
Score = 39.1 bits (87), Expect = 0.019
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +2
Query: 143 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
+DKKL + L GR G++R FD F N+VL +++E
Sbjct: 9 VDKKLIVVLRDGRKFIGIMRTFDQFANIVLQDTIE 43
>UniRef50_Q755T6 Cluster: AER432Cp; n=1; Eremothecium gossypii|Rep:
AER432Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 158
Score = 39.1 bits (87), Expect = 0.019
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = +2
Query: 116 AHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEE 250
+H LK +D KL + GR G L FD MNLVL + VEE
Sbjct: 6 SHRSTLKDLIDYKLRVLSQDGRVYVGTLLAFDAHMNLVLADCVEE 50
>UniRef50_Q979R0 Cluster: Small nuclear ribonucleoprotein; n=4;
Thermoplasmatales|Rep: Small nuclear ribonucleoprotein -
Thermoplasma volcanium
Length = 71
Score = 39.1 bits (87), Expect = 0.019
Identities = 18/52 (34%), Positives = 33/52 (63%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNIGMV 286
L++ ++K++S+ L R + G L G+D +MN+VLD+ V+E + +G V
Sbjct: 8 LEESVNKRVSLLLKDNRVLEGTLTGYDDYMNMVLDD-VDENSENVSRKLGTV 58
>UniRef50_O75243 Cluster: R30783_1; n=3; Mammalia|Rep: R30783_1 -
Homo sapiens (Human)
Length = 145
Score = 38.7 bits (86), Expect = 0.024
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +2
Query: 176 GRAVTGVLRGFDPFMNLVLDESVEECKD 259
GR +G+L+GFDP +NLVLD ++E +D
Sbjct: 72 GRPRSGILKGFDPLLNLVLDGTIEYMRD 99
>UniRef50_Q6CGS0 Cluster: Similar to sp|P47017 Saccharomyces
cerevisiae YJL124c LSM1 Sm-like; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P47017 Saccharomyces
cerevisiae YJL124c LSM1 Sm-like - Yarrowia lipolytica
(Candida lipolytica)
Length = 144
Score = 38.7 bits (86), Expect = 0.024
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 143 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEE 250
+D+K+ + L GR G+LR FD F NLVL ++ E+
Sbjct: 24 IDRKVVVTLRGGRKFFGILRSFDQFANLVLQDTYEK 59
>UniRef50_O74483 Cluster: U6 snRNA-associated Sm-like protein LSm8;
n=1; Schizosaccharomyces pombe|Rep: U6 snRNA-associated
Sm-like protein LSm8 - Schizosaccharomyces pombe
(Fission yeast)
Length = 94
Score = 38.7 bits (86), Expect = 0.024
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
L FM++++ + N GR V G L+GFD NL+L +S E
Sbjct: 3 LADFMEQRVQVITNDGRVVLGSLKGFDHTTNLILSDSFE 41
>UniRef50_O95777 Cluster: U6 snRNA-associated Sm-like protein LSm8;
n=23; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm8 - Homo sapiens (Human)
Length = 96
Score = 38.7 bits (86), Expect = 0.024
Identities = 15/39 (38%), Positives = 28/39 (71%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
L+ ++++ +++ + GR + G L+GFD +NL+LDES E
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHE 43
>UniRef50_A4S5K5 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 126
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 143 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
+DK+L + L G + G LR FD F N+VL+ +VE
Sbjct: 17 LDKRLLVALRDGSNIIGTLRSFDQFANIVLESAVE 51
>UniRef50_Q20229 Cluster: Putative uncharacterized protein lsm-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein lsm-1 - Caenorhabditis elegans
Length = 125
Score = 38.3 bits (85), Expect = 0.032
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +2
Query: 143 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
+DKKL + L GR + G LR D F NL+L++ VE
Sbjct: 18 LDKKLLVVLRDGRKLIGFLRSIDQFANLILEDVVE 52
>UniRef50_A4VCU1 Cluster: Small nuclear ribonucleoprotein E,
putative; n=1; Tetrahymena thermophila SB210|Rep: Small
nuclear ribonucleoprotein E, putative - Tetrahymena
thermophila SB210
Length = 140
Score = 38.3 bits (85), Expect = 0.032
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Frame = +2
Query: 140 FMDKKLSIKL----NAGRAVTGVLRGFDPFMNLVLDESVE-ECKDGQRNNIGMV 286
F+ K++ +++ N + G + GFD +MN+VLDE+ E +CK Q+ IG +
Sbjct: 19 FLQKQVRVQIWLFENTEIKLEGKIIGFDEYMNMVLDETSEVDCKTNQKREIGRI 72
>UniRef50_P47017 Cluster: Sm-like protein LSm1; n=11;
Saccharomycetales|Rep: Sm-like protein LSm1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 172
Score = 38.3 bits (85), Expect = 0.032
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 143 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRN 271
+D+K+ + L GR + GVLR FD + NL+L + VE + N
Sbjct: 50 VDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEEN 92
>UniRef50_Q1HQ51 Cluster: LSM1-like protein; n=3; Endopterygota|Rep:
LSM1-like protein - Bombyx mori (Silk moth)
Length = 138
Score = 37.9 bits (84), Expect = 0.043
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +2
Query: 143 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ 265
+DKKL + L GR + G LR D F NLVL +++E G+
Sbjct: 18 LDKKLMVLLRDGRTLIGYLRCVDQFANLVLHKTIERIHVGK 58
>UniRef50_A7DR38 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Like-Sm
ribonucleoprotein, core - Candidatus Nitrosopumilus
maritimus SCM1
Length = 78
Score = 37.9 bits (84), Expect = 0.043
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNIGMV 286
L + +++ + IKL + + G L GFD MNL+LD S E +G+ +G +
Sbjct: 10 LDESINQIVLIKLKGNKTIRGNLLGFDQHMNLLLDSSEEIPAEGEAKGLGSI 61
>UniRef50_A3H6D3 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Caldivirga maquilingensis IC-167|Rep: Like-Sm
ribonucleoprotein, core - Caldivirga maquilingensis
IC-167
Length = 86
Score = 37.9 bits (84), Expect = 0.043
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
L ++K + +KL AGR ++G LR D MN+VLD++ E
Sbjct: 16 LGMMVNKSVVVKLKAGRVLSGTLRFIDQCMNIVLDDAEE 54
>UniRef50_Q701X8 Cluster: Putative uncharacterized protein; n=1;
uncultured crenarchaeote|Rep: Putative uncharacterized
protein - uncultured crenarchaeote
Length = 89
Score = 37.5 bits (83), Expect = 0.057
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNN 274
L++ + K + +KL R+V G ++GFD MN+V+ E+ E + NN
Sbjct: 11 LQESVGKIVLVKLKGRRSVKGKIKGFDKQMNIVITEATEVIEQQSNNN 58
>UniRef50_P87173 Cluster: Uncharacterized protein C3D6.08c; n=1;
Schizosaccharomyces pombe|Rep: Uncharacterized protein
C3D6.08c - Schizosaccharomyces pombe (Fission yeast)
Length = 140
Score = 37.5 bits (83), Expect = 0.057
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
L ++D+K+ + L G+ + G+LR FD F NL+L ++E
Sbjct: 16 LVDYVDRKVIVVLRDGKKLIGILRSFDQFANLMLQYTIE 54
>UniRef50_O15116 Cluster: U6 snRNA-associated Sm-like protein LSm1;
n=23; Eumetazoa|Rep: U6 snRNA-associated Sm-like protein
LSm1 - Homo sapiens (Human)
Length = 133
Score = 37.5 bits (83), Expect = 0.057
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2
Query: 143 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQR 268
+DKK + L GR + G LR D F NLVL ++VE G++
Sbjct: 14 IDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKK 55
>UniRef50_Q01J34 Cluster: OSIGBa0140O07.9 protein; n=5; Oryza
sativa|Rep: OSIGBa0140O07.9 protein - Oryza sativa
(Rice)
Length = 136
Score = 37.1 bits (82), Expect = 0.075
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ 265
L F+DKKL + L GR + G L FD F N+VL + E G+
Sbjct: 16 LAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGE 60
>UniRef50_Q4UHZ4 Cluster: (U6) snRNA-associated Sm-like protein,
putative; n=3; Piroplasmida|Rep: (U6) snRNA-associated
Sm-like protein, putative - Theileria annulata
Length = 90
Score = 37.1 bits (82), Expect = 0.075
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
+ K + K+ I + + +TG LRGFD +MN+VL++ V+
Sbjct: 16 IDKCLGSKIWIIMKNDKEITGTLRGFDDYMNMVLEDVVD 54
>UniRef50_Q8TYS2 Cluster: Small nuclear ribonucleoprotein (SnRNP)
homolog; n=1; Methanopyrus kandleri|Rep: Small nuclear
ribonucleoprotein (SnRNP) homolog - Methanopyrus
kandleri
Length = 73
Score = 37.1 bits (82), Expect = 0.075
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ 265
L+ F+D + ++L G+ + G L FD +NLVLD+ VE +D +
Sbjct: 7 LRDFLDDIVIVELKTGKTLRGRLVSFDGHLNLVLDDCVEIDEDSE 51
>UniRef50_Q9UUI1 Cluster: U6 snRNA-associated Sm-like protein LSm6;
n=33; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm6 - Schizosaccharomyces pombe (Fission yeast)
Length = 75
Score = 36.7 bits (81), Expect = 0.099
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNI 277
L K + KK+ I+L++G G+L D +MNL L E EE +G++ N+
Sbjct: 9 LNKVIGKKVLIRLSSGVDYKGILSCLDGYMNLAL-ERTEEYVNGKKTNV 56
>UniRef50_P57743 Cluster: U6 snRNA-associated Sm-like protein LSm3;
n=2; Saccharomyces cerevisiae|Rep: U6 snRNA-associated
Sm-like protein LSm3 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 89
Score = 36.7 bits (81), Expect = 0.099
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
LK +D+++ IKL R + G L+ FD N+VL ++VE
Sbjct: 8 LKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVE 46
>UniRef50_Q05E36 Cluster: Putative small nucleolar RNP protein Sm;
n=1; Aeropyrum pernix|Rep: Putative small nucleolar RNP
protein Sm - Aeropyrum pernix
Length = 94
Score = 35.9 bits (79), Expect = 0.17
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQR 268
LK+ ++ ++ +KL G G L D MNL+LD+++E +G R
Sbjct: 16 LKEHLNSQIYVKLKDGSEYVGKLVATDTTMNLILDDAIEVADNGTR 61
>UniRef50_A3DMZ9 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Staphylothermus marinus F1|Rep: Like-Sm
ribonucleoprotein, core - Staphylothermus marinus
(strain ATCC 43588 / DSM 3639 / F1)
Length = 149
Score = 35.9 bits (79), Expect = 0.17
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 128 ELKKFMDKKLSIKLNAGRAVTGVLRGFD-PFMNLVLDESVE 247
EL +DKK+ + L GR G+L GFD P +N++L+ +V+
Sbjct: 13 ELAGLVDKKVKVILADGRFYEGILTGFDHPSLNILLENAVD 53
>UniRef50_O26745 Cluster: Putative snRNP Sm-like protein; n=4;
Euryarchaeota|Rep: Putative snRNP Sm-like protein -
Methanobacterium thermoautotrophicum
Length = 81
Score = 35.9 bits (79), Expect = 0.17
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = +2
Query: 143 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ 265
++ + IKL R GVL+ FD MNLVL+++ EE +DG+
Sbjct: 22 LNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDA-EELEDGE 61
>UniRef50_P62312 Cluster: U6 snRNA-associated Sm-like protein LSm6;
n=22; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm6 - Homo sapiens (Human)
Length = 80
Score = 35.9 bits (79), Expect = 0.17
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 104 NMSKAHPPE-LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNN 274
++ K P + LK+ + + + +KLN+G GVL D +MN+ L E EE +GQ N
Sbjct: 2 SLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAL-EQTEEYVNGQLKN 58
>UniRef50_P40089 Cluster: U6 snRNA-associated Sm-like protein LSm5;
n=5; Saccharomycetales|Rep: U6 snRNA-associated Sm-like
protein LSm5 - Saccharomyces cerevisiae (Baker's yeast)
Length = 93
Score = 35.9 bits (79), Expect = 0.17
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
+ K +++K+ I L + R G L GFD F+N++L+++VE
Sbjct: 12 IDKTINQKVLIVLQSNREFEGTLVGFDDFVNVILEDAVE 50
>UniRef50_Q7QZM9 Cluster: GLP_680_47464_47838; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_680_47464_47838 - Giardia lamblia
ATCC 50803
Length = 124
Score = 35.5 bits (78), Expect = 0.23
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 149 KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
K + ++L +GR +TGVL+ +D +NLV E+ E
Sbjct: 62 KPVLVQLRSGRFITGVLKAYDRHLNLVFSEATE 94
>UniRef50_A4VDT4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 107
Score = 35.5 bits (78), Expect = 0.23
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRN 271
L+K + KK+ I G+ + G+L+G D +N +L + VE + N
Sbjct: 17 LEKLLFKKIQIITTDGKVLIGILKGLDQALNSILSDCVERVFSSENN 63
>UniRef50_Q6CWY1 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome B of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 191
Score = 35.5 bits (78), Expect = 0.23
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 113 KAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEE 250
K +L +D ++ + + GR G L FD +MNLV+ + VEE
Sbjct: 7 KKKETKLSDLIDYRIRVATHDGRVYIGQLMAFDAYMNLVMGDCVEE 52
>UniRef50_Q5CQ90 Cluster: Small nuclear ribonucleoprotein U6; n=1;
Cryptosporidium parvum Iowa II|Rep: Small nuclear
ribonucleoprotein U6 - Cryptosporidium parvum Iowa II
Length = 160
Score = 35.1 bits (77), Expect = 0.30
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
L++ +DK++ + L GR TG+ R FD + +L L+ S E
Sbjct: 46 LEEDLDKEIYVVLRDGRQFTGIFRSFDQYGSLCLERSFE 84
>UniRef50_Q4Q9J1 Cluster: Lsm7p protein, putative; n=6;
Trypanosomatidae|Rep: Lsm7p protein, putative -
Leishmania major
Length = 91
Score = 35.1 bits (77), Expect = 0.30
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNIG 280
L+K++D+K+ + G V GVL+GFD +NLVL ++ +D IG
Sbjct: 18 LEKYLDRKIVVS-QKGHEVHGVLKGFDNNVNLVLADAELWHRDTHVRKIG 66
>UniRef50_Q17E06 Cluster: Small nuclear ribonucleoprotein, core,
putative; n=2; Culicidae|Rep: Small nuclear
ribonucleoprotein, core, putative - Aedes aegypti
(Yellowfever mosquito)
Length = 162
Score = 35.1 bits (77), Expect = 0.30
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
L+ +++ +SI GR G L+GFD +N++LDES E
Sbjct: 71 LESYVNTTVSIITADGRNFVGTLKGFDQTINIILDESHE 109
>UniRef50_A2FZR2 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 89
Score = 34.7 bits (76), Expect = 0.40
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 101 FNMSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
FN + L++ + K+ IKL R + G L D F NLVL+++VE
Sbjct: 6 FNDHDPYYMNLREMIGHKVFIKLENNRELEGTLMSLDQFGNLVLNDTVE 54
>UniRef50_A0D2M7 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 83
Score = 34.7 bits (76), Expect = 0.40
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2
Query: 128 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDE 238
+L+ ++K++ I+ GR V G L FD +NLVLDE
Sbjct: 11 KLQSHINKEVVIQFQGGRQVKGTLLSFDNQLNLVLDE 47
>UniRef50_Q5KN63 Cluster: Sm-like protein, putative; n=1;
Filobasidiella neoformans|Rep: Sm-like protein, putative
- Cryptococcus neoformans (Filobasidiella neoformans)
Length = 95
Score = 34.7 bits (76), Expect = 0.40
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 104 NMSKAHPPELKKF-MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
N P +L K + +++ IKL R VTGVL +D MN+V+ ++ E
Sbjct: 6 NSQIQEPLDLVKLALGERVLIKLRGDRIVTGVLHAYDAHMNVVISQAEE 54
>UniRef50_Q0UX37 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 80
Score = 34.3 bits (75), Expect = 0.53
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
+ K + ++ + +N G+ TG L GFD ++N+VL+E E
Sbjct: 21 IDKCVGSQIWVIMNGGKEFTGKLVGFDDYVNMVLEEVTE 59
>UniRef50_A7TII8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 109
Score = 34.3 bits (75), Expect = 0.53
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 125 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDE 238
P LK +++KK+ I GR + L GFD NLVL +
Sbjct: 3 PLLKDYLNKKIVIITTEGRCLLATLEGFDKNTNLVLSQ 40
>UniRef50_Q9Y4Y9 Cluster: U6 snRNA-associated Sm-like protein LSm5;
n=27; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm5 - Homo sapiens (Human)
Length = 91
Score = 34.3 bits (75), Expect = 0.53
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 104 NMSKAHPPEL-KKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
N S+ P EL K + ++ I + + + + G L GFD F+N+VL++ E
Sbjct: 8 NPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTE 56
>UniRef50_Q98S49 Cluster: Small nuclear ribonucleoprotein F; n=1;
Guillardia theta|Rep: Small nuclear ribonucleoprotein F
- Guillardia theta (Cryptomonas phi)
Length = 73
Score = 33.9 bits (74), Expect = 0.70
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 146 DKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNIGMV 286
+K + +KL G + TG+ G D +MN++LD E + +G+V
Sbjct: 12 NKNVFVKLKWGSSYTGIFIGSDNYMNIILDSCSEVITEQNLGFLGLV 58
>UniRef50_Q6BR90 Cluster: Similar to CA5853|CaLSM6 Candida albicans
CaLSM6; n=3; Ascomycota|Rep: Similar to CA5853|CaLSM6
Candida albicans CaLSM6 - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 84
Score = 33.9 bits (74), Expect = 0.70
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNIGMV 286
L + + ++++L+ G G L+ D +MN+VLDE+ E Q N G V
Sbjct: 21 LSEIIGSSVTVRLHNGVEYLGNLQSIDGYMNIVLDETKEFVGGDQARNYGDV 72
>UniRef50_A1CDT1 Cluster: Small nuclear ribonucleoprotein SmE,
putative; n=12; Pezizomycotina|Rep: Small nuclear
ribonucleoprotein SmE, putative - Aspergillus clavatus
Length = 95
Score = 33.9 bits (74), Expect = 0.70
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +2
Query: 185 VTGVLRGFDPFMNLVLDESVE 247
+ G +RGFD FMNLV+D++VE
Sbjct: 43 IEGKIRGFDEFMNLVVDDAVE 63
>UniRef50_Q8ZYG5 Cluster: Small nuclear ribonucleoprotein homolog;
n=5; Thermoproteaceae|Rep: Small nuclear
ribonucleoprotein homolog - Pyrobaculum aerophilum
Length = 80
Score = 33.9 bits (74), Expect = 0.70
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDG 262
L+ + K++ +KL + G+LR FD +NL+L E EE DG
Sbjct: 16 LQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLL-EDAEEIIDG 58
>UniRef50_Q0WMZ9 Cluster: Sm-like protein; n=19; Eukaryota|Rep:
Sm-like protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 88
Score = 33.5 bits (73), Expect = 0.92
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 104 NMSKAHPPEL-KKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
N S+ P EL + + K+ + + + + G+L+GFD ++N+VL++ E
Sbjct: 4 NPSQLLPSELIDRCIGSKIWVIMKGDKELVGILKGFDVYVNMVLEDVTE 52
>UniRef50_Q6BQK4 Cluster: Similar to CA3420|CaSMX4 Candida albicans
CaSMX4 U6 snRNA-associated Sm-like protein; n=2;
Saccharomycetaceae|Rep: Similar to CA3420|CaSMX4 Candida
albicans CaSMX4 U6 snRNA-associated Sm-like protein -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 88
Score = 33.5 bits (73), Expect = 0.92
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +2
Query: 122 PPELKKF-MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKD 259
P +L ++ +D+ + +KL R + G L+G+D N++L ++VE D
Sbjct: 13 PLDLVRYQLDELVLVKLRGAREMKGKLQGYDSHCNMILSDAVEYIYD 59
>UniRef50_Q0ULJ4 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 234
Score = 33.5 bits (73), Expect = 0.92
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
L +DKK+ + L + G+LR +D F NLVL E E
Sbjct: 97 LLDMVDKKVDVLLRDEKEYIGILRSYDQFANLVLTECHE 135
>UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4;
Thermoplasmatales|Rep: Putative snRNP Sm-like protein -
Thermoplasma acidophilum
Length = 83
Score = 33.5 bits (73), Expect = 0.92
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNI 277
LK + + + I + R +G+L G+D +MN+VL ++ E +G+ +
Sbjct: 14 LKSALSRNVLIDVKGNREYSGILEGYDVYMNIVL-QNASEIINGENKGV 61
>UniRef50_Q4MZX3 Cluster: Small nuclear ribonucleoprotein, putative;
n=2; Theileria|Rep: Small nuclear ribonucleoprotein,
putative - Theileria parva
Length = 91
Score = 33.1 bits (72), Expect = 1.2
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 185 VTGVLRGFDPFMNLVLDESVE-ECKDGQRNNIGMV 286
+ G +RGFD +MN+VLD + E K + ++G +
Sbjct: 41 IEGTIRGFDEYMNMVLDNATEVHVKKNVKKDVGRI 75
>UniRef50_Q8SRU9 Cluster: U6 snRNA-ASSOCIATED SMALL
RIBONUCLEOPROTEIN; n=1; Encephalitozoon cuniculi|Rep: U6
snRNA-ASSOCIATED SMALL RIBONUCLEOPROTEIN -
Encephalitozoon cuniculi
Length = 102
Score = 33.1 bits (72), Expect = 1.2
Identities = 12/40 (30%), Positives = 27/40 (67%)
Frame = +2
Query: 128 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
+ +K++++++ + L GR + GV++ FD F ++ LD +E
Sbjct: 11 DYEKYLEQEVVVMLRDGRYLYGVMKSFDQFNSVTLDGVIE 50
>UniRef50_Q6CX51 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome A of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome A of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 91
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNIGMV 286
L + + L I L+ R++TG L D NL+LDE VE DG +G+V
Sbjct: 9 LHDLLSETLYINLDQKRSLTGKLIAIDCKANLLLDEVVEN-NDGHVRKMGLV 59
>UniRef50_Q9LMB5 Cluster: F14D16.28; n=6; core eudicotyledons|Rep:
F14D16.28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 223
Score = 32.7 bits (71), Expect = 1.6
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPF 217
L ++DKKL + L GR + G+LR FD F
Sbjct: 72 LAAYLDKKLLVLLRDGRKLMGLLRSFDQF 100
>UniRef50_A2E014 Cluster: Sm protein; n=2; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 84
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +2
Query: 107 MSKAHPPE--LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRN 271
MS+ P+ ++ M+K++ +K+ G+ + GVL +D N++L + +E +N
Sbjct: 1 MSEKPMPQDYIRLSMEKRVKVKVQEGQELEGVLHAYDEHYNIILGDVLESIMGLDKN 57
>UniRef50_Q74ZR8 Cluster: AGR130Wp; n=2; Saccharomycetales|Rep:
AGR130Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 80
Score = 32.7 bits (71), Expect = 1.6
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
+ + +++ + + L + R TG L GFD F+N+V+++ VE
Sbjct: 9 IDRAINQPIWVLLTSNREFTGTLVGFDDFVNVVIEDVVE 47
>UniRef50_Q6FJA6 Cluster: Similar to sp|P47093 Saccharomyces
cerevisiae YJR022w pre-mRNA splicing factor; n=1;
Candida glabrata|Rep: Similar to sp|P47093 Saccharomyces
cerevisiae YJR022w pre-mRNA splicing factor - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 105
Score = 32.7 bits (71), Expect = 1.6
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 125 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDE 238
P LK++++K + + AG + VL G+D + NLV+ E
Sbjct: 3 PLLKQYLNKDIVVVTTAGEVMHVVLDGYDKYTNLVVKE 40
>UniRef50_Q4P7M4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 232
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 128 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
++ ++ +L I LN R + G L FD MNLVL +S E
Sbjct: 10 KMMSLINYRLRITLNDSRQIVGQLLAFDAHMNLVLADSQE 49
>UniRef50_Q7QPB0 Cluster: GLP_122_3813_3433; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_122_3813_3433 - Giardia lamblia ATCC
50803
Length = 126
Score = 32.3 bits (70), Expect = 2.1
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
LK ++ ++S+ L ++TG+L FD MNL+L + E
Sbjct: 57 LKTSLEDRVSVLLQNNSSITGLLASFDEHMNLILINAEE 95
>UniRef50_Q4MZU2 Cluster: U6 snRNA-associated Sm-like protein LSm8,
putative; n=2; Piroplasmida|Rep: U6 snRNA-associated
Sm-like protein LSm8, putative - Theileria parva
Length = 94
Score = 32.3 bits (70), Expect = 2.1
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 125 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
P L++F++ + + GR GVL+GFD NLVL +E
Sbjct: 3 PILEQFIECSVFVISVDGRVFVGVLKGFDQLTNLVLYNCLE 43
>UniRef50_A7TI36 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 193
Score = 32.3 bits (70), Expect = 2.1
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 149 KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRN 271
+K++I+L G + GVL D +MNL L + ++ D N
Sbjct: 13 QKITIELKNGETIKGVLTNVDNWMNLTLSDVIQYDSDALNN 53
>UniRef50_A1CE19 Cluster: LSM domain protein; n=3;
Trichocomaceae|Rep: LSM domain protein - Aspergillus
clavatus
Length = 108
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ 265
L + + +++KLN+G G L+ D +MN+ L++S +E DG+
Sbjct: 15 LSEIIGAPVTVKLNSGVVYKGELQSVDGYMNIALEQS-KEFMDGK 58
>UniRef50_Q9HPS2 Cluster: SnRNP homolog; n=2; Halobacteriaceae|Rep:
SnRNP homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 69
Score = 32.3 bits (70), Expect = 2.1
Identities = 12/35 (34%), Positives = 25/35 (71%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLD 235
L++ +++ ++++L G TGVL G+D MN+V++
Sbjct: 18 LEESLEETVTVRLKDGDEFTGVLTGYDQHMNVVIE 52
>UniRef50_Q9W087 Cluster: CG2021-PA; n=14; Eukaryota|Rep: CG2021-PA
- Drosophila melanogaster (Fruit fly)
Length = 95
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
L+ +++ +SI GR G L+GFD +N+++DE E
Sbjct: 4 LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHE 42
>UniRef50_Q8IIJ2 Cluster: Tyrosine--tRNA ligase, putative; n=5;
Eukaryota|Rep: Tyrosine--tRNA ligase, putative -
Plasmodium falciparum (isolate 3D7)
Length = 613
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/63 (22%), Positives = 34/63 (53%)
Frame = +2
Query: 86 YLI*DFNMSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ 265
YL +F + +++ ++D ++K+N + + V D +N +LDE++++ +
Sbjct: 332 YLFWNF-LRNVEDQKVQSYIDMLTNLKININQEIETVYNPMDTNLNEILDETLDDSNKKK 390
Query: 266 RNN 274
+NN
Sbjct: 391 KNN 393
>UniRef50_O29386 Cluster: Putative snRNP Sm-like protein; n=10;
Archaea|Rep: Putative snRNP Sm-like protein -
Archaeoglobus fulgidus
Length = 77
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ 265
L + + + ++L GR G L G+D MNLVL ++ EE ++G+
Sbjct: 9 LNRSLKSPVIVRLKGGREFRGTLDGYDIHMNLVLLDA-EEIQNGE 52
>UniRef50_Q12330 Cluster: Small nuclear ribonucleoprotein E; n=3;
Saccharomycetaceae|Rep: Small nuclear ribonucleoprotein
E - Saccharomyces cerevisiae (Baker's yeast)
Length = 94
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 176 GRAVTGVLRGFDPFMNLVLDESVE 247
G + G + GFD FMN+V+DE+VE
Sbjct: 36 GIRIKGKIVGFDEFMNVVIDEAVE 59
>UniRef50_UPI0000499A4F Cluster: small nuclear ribonucleoprotein F;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: small nuclear
ribonucleoprotein F - Entamoeba histolytica HM-1:IMSS
Length = 205
Score = 31.5 bits (68), Expect = 3.7
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +2
Query: 128 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEE 250
++ K+++ + + GR G FD +MN++L E++E+
Sbjct: 7 KISKYINYTIKVTTIEGRNFVGKFLAFDKYMNMILSETIEK 47
>UniRef50_Q6QA14 Cluster: Lsm8p; n=6; Trypanosomatidae|Rep: Lsm8p -
Trypanosoma brucei
Length = 129
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ 265
L +++ +++S+ GR + GVL D MNLVL E D +
Sbjct: 2 LSQYLRRRVSVVTVDGRYLVGVLHAADQLMNLVLTSCAERVFDDE 46
>UniRef50_A7AQW8 Cluster: Small nuclear ribonucleoprotein F,
putative; n=1; Babesia bovis|Rep: Small nuclear
ribonucleoprotein F, putative - Babesia bovis
Length = 94
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2
Query: 125 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDG 262
P L K + + + + L G G L+ FD +MN+ L E+ EE ++G
Sbjct: 26 PFLAKLVGQNVFVTLKWGMEYKGFLKSFDSYMNIEL-ENAEEWENG 70
>UniRef50_Q9YEQ5 Cluster: Putative snRNP Sm-like protein; n=1;
Aeropyrum pernix|Rep: Putative snRNP Sm-like protein -
Aeropyrum pernix
Length = 77
Score = 31.5 bits (68), Expect = 3.7
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +2
Query: 140 FMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
++D + +KL +G + GVL+ +D +N++L ++ E
Sbjct: 16 YVDTPVLVKLKSGLRIKGVLKTYDQHLNIILGDAEE 51
>UniRef50_Q116G3 Cluster: Orn/Lys/Arg decarboxylase, major region;
n=1; Trichodesmium erythraeum IMS101|Rep: Orn/Lys/Arg
decarboxylase, major region - Trichodesmium erythraeum
(strain IMS101)
Length = 542
Score = 31.1 bits (67), Expect = 4.9
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 198 NTPVTALPALSFIDSFLSMNFFNSGGCALDMLKS*IK 88
+ P T LP ++ +FL N+FN G ALD+ + IK
Sbjct: 348 SNPNTQLPTPNYPPNFLIKNYFNPGFIALDLTRLTIK 384
>UniRef50_Q9FI15 Cluster: Similarity to small nuclear
ribonucleoprotein; n=6; Viridiplantae|Rep: Similarity to
small nuclear ribonucleoprotein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 254
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +2
Query: 107 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
MS + ++ +F++ ++ + + GR + G FD MNLVL + E
Sbjct: 1 MSMSKSSKMLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEE 47
>UniRef50_O94488 Cluster: MT organizer Mto1; n=1; Schizosaccharomyces
pombe|Rep: MT organizer Mto1 - Schizosaccharomyces pombe
(Fission yeast)
Length = 1115
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -1
Query: 228 TRFIKGSKPLNTPVTALPALSFIDSFLSMNF 136
T+ GSKP+NT V AL +S ++ ++MNF
Sbjct: 919 TQLNTGSKPVNTNVEALTTISSMNQAVNMNF 949
>UniRef50_A2X0E3 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 141
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 200 RGFDPFMNLVLDESVE-ECKDGQRNNIGMV 286
+GFD +MNLVLDE+ E K R ++G +
Sbjct: 97 KGFDEYMNLVLDEAEEINIKKDTRKSLGRI 126
>UniRef50_A7ARJ0 Cluster: Small nuclear ribonucleoprotein F,
putative; n=1; Babesia bovis|Rep: Small nuclear
ribonucleoprotein F, putative - Babesia bovis
Length = 83
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 149 KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ 265
K + +KLN G G+L D MNL ++ + E C DG+
Sbjct: 16 KPVIVKLNNGTRFRGLLSSLDDRMNLAMENTKEYC-DGE 53
>UniRef50_A3FQK4 Cluster: Small nuclear ribonucleoprotein, putative;
n=1; Cryptosporidium parvum Iowa II|Rep: Small nuclear
ribonucleoprotein, putative - Cryptosporidium parvum
Iowa II
Length = 92
Score = 30.7 bits (66), Expect = 6.5
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +2
Query: 191 GVLRGFDPFMNLVLDESVE 247
GV++GFD +MN+VLD++ E
Sbjct: 44 GVIQGFDEYMNIVLDQASE 62
>UniRef50_A0C1J5 Cluster: Chromosome undetermined scaffold_142,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 95
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 170 NAGRAVTGVLRGFDPFMNLVLDESVE 247
N + G L GFD ++NLVLD +VE
Sbjct: 38 NDNLRIQGKLAGFDEYLNLVLDRAVE 63
>UniRef50_A4RQ29 Cluster: U6 snRNA-associated Sm-like protein LSm6;
n=2; Pezizomycotina|Rep: U6 snRNA-associated Sm-like
protein LSm6 - Magnaporthe grisea (Rice blast fungus)
(Pyricularia grisea)
Length = 83
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQR 268
L + + +++KLN+G G L+ D +MN+ L E EE GQ+
Sbjct: 18 LGEIIGNMVTVKLNSGVIYKGELQSVDGYMNIAL-EKAEEWVAGQK 62
>UniRef50_Q10163 Cluster: Uncharacterized protein C26A3.08; n=38;
Fungi/Metazoa group|Rep: Uncharacterized protein
C26A3.08 - Schizosaccharomyces pombe (Fission yeast)
Length = 147
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 128 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
++ ++ L++ GR G L FD FMNLVL + E
Sbjct: 5 KMVSLLNHSLNVTTKDGRTFVGQLLAFDGFMNLVLSDCQE 44
>UniRef50_Q9SUM2 Cluster: Probable small nuclear ribonucleoprotein
F; n=7; Magnoliophyta|Rep: Probable small nuclear
ribonucleoprotein F - Arabidopsis thaliana (Mouse-ear
cress)
Length = 88
Score = 30.7 bits (66), Expect = 6.5
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 125 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ-RNNIGMV 286
P L K + +KL G G L D +MNL L + EE DGQ N+G +
Sbjct: 10 PFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLG-NTEEYIDGQLTGNLGEI 63
>UniRef50_P62304 Cluster: Small nuclear ribonucleoprotein E; n=51;
Eukaryota|Rep: Small nuclear ribonucleoprotein E - Homo
sapiens (Human)
Length = 92
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 185 VTGVLRGFDPFMNLVLDESVE-ECKDGQRNNIGMV 286
+ G + GFD +MNLVLD++ E K R +G +
Sbjct: 43 IEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRI 77
>UniRef50_Q5KWM7 Cluster: Hypothetical conserved protein; n=2;
Geobacillus|Rep: Hypothetical conserved protein -
Geobacillus kaustophilus
Length = 310
Score = 30.3 bits (65), Expect = 8.6
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 119 HPPELKKFMDKKLSI-KLNAGRAVTGVLRGFDPFMNLVLDESVEECK-DGQR 268
HPPE+K++ ++ L + + GR V G + ++LDE VEE K DG R
Sbjct: 29 HPPEVKRWGERALPVGVVRDGRIVDG------ETLAMILDECVEEWKIDGHR 74
>UniRef50_Q5KRD7 Cluster: Putative uncharacterized protein; n=2;
Corynebacterium glutamicum|Rep: Putative uncharacterized
protein - Corynebacterium glutamicum (Brevibacterium
flavum)
Length = 389
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -1
Query: 222 FIKGSKP-LNTPVTALPALSFIDSFLSMNFFNSGGCALDMLK 100
FI+G +P + P+T PAL++ L++ +G ALD ++
Sbjct: 212 FIRGGQPTIEEPLTRYPALAYAAQVLAVTALGAGRGALDFVR 253
>UniRef50_A3BPN8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 111
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 185 VTGVLRGFDPFMNLVLDESVE-ECKDGQRNNIGMV 286
+ G + GFD +MNLVLD++ E K R ++G +
Sbjct: 30 IEGRIIGFDEYMNLVLDDAEEINVKKDTRKSLGRI 64
>UniRef50_Q8IL38 Cluster: Small nuclear ribonuclear protein,
putative; n=3; Plasmodium|Rep: Small nuclear ribonuclear
protein, putative - Plasmodium falciparum (isolate 3D7)
Length = 101
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
+ K + K+ I + + + G L GFD ++N+VL++ E
Sbjct: 16 MDKCIGSKIWIMMKGDKEIVGKLVGFDEYVNMVLEDVTE 54
>UniRef50_Q75BR7 Cluster: ACR204Cp; n=2; Saccharomycetales|Rep:
ACR204Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 85
Score = 30.3 bits (65), Expect = 8.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
L + K +++KL++G G L D FMN+ L ++ E
Sbjct: 17 LSNIIGKPVNVKLHSGMLYQGTLESIDGFMNVALVDASE 55
>UniRef50_Q5K712 Cluster: U6 snRNA-associated sm-like protein lsm6,
putative; n=1; Filobasidiella neoformans|Rep: U6
snRNA-associated sm-like protein lsm6, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 88
Score = 30.3 bits (65), Expect = 8.6
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +2
Query: 131 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
L+ + K++ +++ +G TG+L D +MN+ L+++ E
Sbjct: 21 LRNIVGKRVKVRIGSGVDYTGLLTCLDGYMNVALEQAEE 59
>UniRef50_Q4WP21 Cluster: Small nuclear ribonucleoprotein SmB,
putative; n=2; Eukaryota|Rep: Small nuclear
ribonucleoprotein SmB, putative - Aspergillus fumigatus
(Sartorya fumigata)
Length = 357
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 152 KLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 247
++ I L GR +TG + FD MNLVL ++ E
Sbjct: 134 RMRITLTDGRQMTGQMLAFDKHMNLVLADTEE 165
>UniRef50_Q0UQD0 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 187
Score = 30.3 bits (65), Expect = 8.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 161 IKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQR 268
++L +G + G+L D +MNL L E V+ DG +
Sbjct: 77 VELKSGETLNGLLVNCDTWMNLTLREVVQTSADGDK 112
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 251,071,152
Number of Sequences: 1657284
Number of extensions: 3840987
Number of successful extensions: 8316
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 8199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8313
length of database: 575,637,011
effective HSP length: 73
effective length of database: 454,655,279
effective search space used: 10002416138
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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