Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_B03
         (358 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    20   6.6  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     20   6.6  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    20   8.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   8.7  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 105 SPHLKTSAMLKSPPQID 155
           SP+ K SA    PPQ++
Sbjct: 220 SPNSKKSATPSPPPQLE 236


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund
          protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 43 SLWTHRPPRQASTFLS 90
          S W  RPP++A   LS
Sbjct: 35 SSWPGRPPKRAPVGLS 50


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = +3

Query: 159 HYSRAADAHSHDHEQEQKEEPTQGPYEDDDGMVG 260
           H  + AD   HD      +    GPY    G++G
Sbjct: 262 HTFQLADPAQHDLGAPVIDAGMSGPYTKGYGVMG 295


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 259 VRSLWVIYLTRGPAMLPVRMMLRTT 333
           V+ LWVIY  +  A+  V   L  T
Sbjct: 54  VKILWVIYWLQDDALKSVYASLLCT 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,003
Number of Sequences: 336
Number of extensions: 1151
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)