Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_B03
(358 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical pr... 28 1.7
U53147-2|AAA96114.2| 935|Caenorhabditis elegans Hypothetical pr... 28 2.2
U13876-17|AAA21167.1| 253|Caenorhabditis elegans Hypothetical p... 28 2.2
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 27 2.9
AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical ... 27 2.9
AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical ... 27 2.9
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ... 27 2.9
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 27 2.9
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 27 3.9
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 27 5.1
U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein. 27 5.1
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 27 5.1
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 27 5.1
Z81128-3|CAB03401.1| 410|Caenorhabditis elegans Hypothetical pr... 26 6.7
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 26 6.7
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 26 6.7
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 26 8.9
Z81581-13|CAE17944.1| 166|Caenorhabditis elegans Hypothetical p... 26 8.9
Z81143-8|CAE18064.1| 166|Caenorhabditis elegans Hypothetical pr... 26 8.9
Z75541-1|CAA99853.3| 1119|Caenorhabditis elegans Hypothetical pr... 26 8.9
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 26 8.9
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 26 8.9
U88167-8|ABE73339.1| 140|Caenorhabditis elegans Hypothetical pr... 26 8.9
DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium depend... 26 8.9
AY887903-1|AAX34415.1| 1119|Caenorhabditis elegans anion transpo... 26 8.9
AF125953-1|AAD14702.2| 397|Caenorhabditis elegans Temporarily a... 26 8.9
AF004926-1|AAC16758.1| 1119|Caenorhabditis elegans HCO3 transpor... 26 8.9
AC024835-3|AAK68538.2| 405|Caenorhabditis elegans Hypothetical ... 26 8.9
>Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical
protein T28F3.3 protein.
Length = 393
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +3
Query: 24 APSTCRLTLDSPTSSASFDLPLLTAFXSPHLKTSAMLKSPPQIDSHYSRAADAHSHDHEQ 203
AP T + + ++ F L +L AF + L A+L P S + + D H H+H
Sbjct: 97 APCTLLFFIPAQHANGPF-LKILLAFGAGGLLGDALLHIIPHSLSPHDHSHDHHDHNHSH 155
Query: 204 EQKE 215
++ +
Sbjct: 156 KEHD 159
>U53147-2|AAA96114.2| 935|Caenorhabditis elegans Hypothetical
protein C01B7.1a protein.
Length = 935
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 192 DHEQEQKEEPTQGPYEDDDGMVGEEPVGYLSNE 290
+HEQE ++E +G EDDDG GEE S++
Sbjct: 717 EHEQEHEDEDGEGD-EDDDG-EGEETTPITSSK 747
>U13876-17|AAA21167.1| 253|Caenorhabditis elegans Hypothetical
protein F57B9.1 protein.
Length = 253
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 111 HLKTSAMLKSPPQIDSHYSRAADAHSHDHEQEQKEEPTQGPYE 239
HL + + P ID RA +SHD + + PT P+E
Sbjct: 20 HLARRSYVMETPSIDIQNIRAKYLNSHDPYLLESKLPTTSPFE 62
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +3
Query: 120 TSAMLKSPPQIDSH-----YSRAADAHSHDHEQEQKEEP 221
T ++ +PP +H + A+DAH H H+ +Q++ P
Sbjct: 902 TVSLTPAPPAAMTHSMHAMHIGASDAHYHQHQHQQQQNP 940
>AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical
protein W03F11.6e protein.
Length = 1039
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +3
Query: 120 TSAMLKSPPQIDSH-----YSRAADAHSHDHEQEQKEEP 221
T ++ +PP +H + A+DAH H H+ +Q++ P
Sbjct: 900 TVSLTPAPPAAMTHSMHAMHIGASDAHYHQHQHQQQQNP 938
>AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical
protein W03F11.6d protein.
Length = 1184
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +3
Query: 120 TSAMLKSPPQIDSH-----YSRAADAHSHDHEQEQKEEP 221
T ++ +PP +H + A+DAH H H+ +Q++ P
Sbjct: 900 TVSLTPAPPAAMTHSMHAMHIGASDAHYHQHQHQQQQNP 938
>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
protein W03F11.6c protein.
Length = 1419
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +3
Query: 120 TSAMLKSPPQIDSH-----YSRAADAHSHDHEQEQKEEP 221
T ++ +PP +H + A+DAH H H+ +Q++ P
Sbjct: 900 TVSLTPAPPAAMTHSMHAMHIGASDAHYHQHQHQQQQNP 938
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +3
Query: 120 TSAMLKSPPQIDSH-----YSRAADAHSHDHEQEQKEEP 221
T ++ +PP +H + A+DAH H H+ +Q++ P
Sbjct: 900 TVSLTPAPPAAMTHSMHAMHIGASDAHYHQHQHQQQQNP 938
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 27.1 bits (57), Expect = 3.9
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 54 SPTSSASFDLPLLTAFXSPHLKTSAMLKSPPQIDSHYSRAADAHSHDHEQEQKEE 218
S +S A DLP S HL+T + + PP D R + S D + + ++E
Sbjct: 489 SQSSLAESDLPDEPRGTSAHLETISEISEPPTND---ERLVFSSSEDEDDDDEDE 540
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical protein
W04A8.7 protein.
Length = 1792
Score = 26.6 bits (56), Expect = 5.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 186 SHDHEQEQKEEPTQGPYEDDDGMVGEE 266
S DH E ++ PT+ EDDD + ++
Sbjct: 1712 SDDHMDEMEDHPTEEEEEDDDDEIMDD 1738
>U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein.
Length = 276
Score = 26.6 bits (56), Expect = 5.1
Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
Frame = +3
Query: 111 HLKTSAMLKSPPQIDS--HYSRAADAHSHDHEQEQKEEPTQGPYEDDDGMVGEEPVGYLS 284
H +L P + + H + D S DH + Q+++ + D + +EP S
Sbjct: 88 HQDFQDLLDQPEETEDADHQDQLEDQESKDHREMQEDQEPPDVQDQQDHVENQEP--STS 145
Query: 285 NEXXXXXXXXXXXXYNDEPDATEH 356
+ D+P+ EH
Sbjct: 146 QDSQDVQDHKDHAEKPDQPEIQEH 169
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 26.6 bits (56), Expect = 5.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 186 SHDHEQEQKEEPTQGPYEDDDGMVGEE 266
S DH E ++ PT+ EDDD + ++
Sbjct: 1712 SDDHMDEMEDHPTEEEEEDDDDEIMDD 1738
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/62 (22%), Positives = 26/62 (41%)
Frame = +3
Query: 60 TSSASFDLPLLTAFXSPHLKTSAMLKSPPQIDSHYSRAADAHSHDHEQEQKEEPTQGPYE 239
TSS ++ PL + + + A +A + + E+E + + +G YE
Sbjct: 319 TSSTTYVEPLPQTYSEINPEFECEADEDDDYLMEAGEAGEAEAEEEEEEAENDVIEGEYE 378
Query: 240 DD 245
DD
Sbjct: 379 DD 380
>Z81128-3|CAB03401.1| 410|Caenorhabditis elegans Hypothetical
protein T23D8.3 protein.
Length = 410
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 192 DHEQEQKEEPTQGPYED--DDGMVGEEPVGYLSNE 290
D E+E+ ++ Y+D DD + GEE VG + E
Sbjct: 151 DSEEEEDDDEDDEMYDDYNDDELFGEEAVGEIRVE 185
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 105 SPHLKTSAMLKSPPQIDSHYSRAADAHSHDHEQEQKEEPTQGPY 236
+P + A + P H A +AH H+Q + P QGP+
Sbjct: 320 APQMTQQAPARGPSGAAQH---AQNAHRMTHQQVPLQAPVQGPH 360
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 105 SPHLKTSAMLKSPPQIDSHYSRAADAHSHDHEQEQKEEPTQGPY 236
+P + A + P H A +AH H+Q + P QGP+
Sbjct: 320 APQMTQQAPARGPSGAAQH---AQNAHRMTHQQVPLQAPVQGPH 360
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 141 PPQIDSHYSRAADAHSHDHEQEQKEEPTQGP 233
PP +S+ D + HD E + EEP + P
Sbjct: 698 PPTHNSNVLPHIDENDHDEENDINEEPPKPP 728
>Z81581-13|CAE17944.1| 166|Caenorhabditis elegans Hypothetical
protein T02E1.8 protein.
Length = 166
Score = 25.8 bits (54), Expect = 8.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 110 W*XEGRQERKVEACRGG 60
W E +ER++EACR G
Sbjct: 38 WYSEQEEERRIEACRQG 54
>Z81143-8|CAE18064.1| 166|Caenorhabditis elegans Hypothetical
protein T02E1.8 protein.
Length = 166
Score = 25.8 bits (54), Expect = 8.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 110 W*XEGRQERKVEACRGG 60
W E +ER++EACR G
Sbjct: 38 WYSEQEEERRIEACRQG 54
>Z75541-1|CAA99853.3| 1119|Caenorhabditis elegans Hypothetical protein
F52B5.1 protein.
Length = 1119
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +3
Query: 114 LKTSAMLKSPPQIDSHYSRAADAHSHDHEQEQKEEPTQGPYEDDD 248
+ S M K +DS S D + ++ P + P +DDD
Sbjct: 1034 VNNSGMWKHITSVDSKNSLVRDVPASSDPTSSRDAPIEQPEDDDD 1078
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 135 KSPPQIDSHYSRAADAHSHDHEQEQKEEPTQGPYED 242
++PP + ++ A S EQ+ K EPT P ED
Sbjct: 828 QAPPSVKD--TKDGVAESKPKEQQAKREPTPPPTED 861
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 135 KSPPQIDSHYSRAADAHSHDHEQEQKEEPTQGPYED 242
++PP + ++ A S EQ+ K EPT P ED
Sbjct: 817 QAPPSVKD--TKDGVAESKPKEQQAKREPTPPPTED 850
>U88167-8|ABE73339.1| 140|Caenorhabditis elegans Hypothetical
protein D2092.10 protein.
Length = 140
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 35 LPTHFGLTDLLGKLRPSSL 91
LP HFGL DL +PS L
Sbjct: 107 LPYHFGLPDLASLCQPSDL 125
>DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium dependent
chloride bicarbonateanion exchanger alternative variant a
protein.
Length = 1161
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +3
Query: 114 LKTSAMLKSPPQIDSHYSRAADAHSHDHEQEQKEEPTQGPYEDDD 248
+ S M K +DS S D + ++ P + P +DDD
Sbjct: 1076 VNNSGMWKHITSVDSKNSLVRDVPASSDPTSSRDAPIEQPEDDDD 1120
>AY887903-1|AAX34415.1| 1119|Caenorhabditis elegans anion transporter
ABTS-1 protein.
Length = 1119
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +3
Query: 114 LKTSAMLKSPPQIDSHYSRAADAHSHDHEQEQKEEPTQGPYEDDD 248
+ S M K +DS S D + ++ P + P +DDD
Sbjct: 1034 VNNSGMWKHITSVDSKNSLVRDVPASSDPTSSRDAPIEQPEDDDD 1078
>AF125953-1|AAD14702.2| 397|Caenorhabditis elegans Temporarily
assigned gene nameprotein 304 protein.
Length = 397
Score = 25.8 bits (54), Expect = 8.9
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +3
Query: 72 SFDLPLLT--AFX-SPHLKTSAMLKSPPQIDSHYSRAADAHSHDHEQEQKEEPTQ 227
+F LP T AF P SA S P H+S D +D+++ + +PT+
Sbjct: 116 NFALPTTTRAAFRIGPQPIASADPSSTPGSSEHHSDTEDVEFNDYKEVMRPDPTR 170
>AF004926-1|AAC16758.1| 1119|Caenorhabditis elegans HCO3 transporter
protein.
Length = 1119
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +3
Query: 114 LKTSAMLKSPPQIDSHYSRAADAHSHDHEQEQKEEPTQGPYEDDD 248
+ S M K +DS S D + ++ P + P +DDD
Sbjct: 1034 VNNSGMWKHITSVDSKNSLVRDVPASSDPTSSRDAPIEQPEDDDD 1078
>AC024835-3|AAK68538.2| 405|Caenorhabditis elegans Hypothetical
protein Y57E12B.4 protein.
Length = 405
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 31 APADSLWTHRPPRQASTFLS*RPSXHHTSKPA 126
AP+DS + + ST P H+T KPA
Sbjct: 190 APSDSTTSINETQTTSTHAETTPEIHYTEKPA 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,009,772
Number of Sequences: 27780
Number of extensions: 122115
Number of successful extensions: 641
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -