Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_A20
(166 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U57592-1|AAC50822.1| 1266|Homo sapiens jumonji putative protein ... 28 4.8
BC046246-1|AAH46246.1| 1246|Homo sapiens jumonji, AT rich intera... 28 4.8
AL136162-1|CAI15719.1| 1246|Homo sapiens jumonji, AT rich intera... 28 4.8
AL021938-1|CAI19873.1| 1246|Homo sapiens jumonji, AT rich intera... 28 4.8
Y14443-1|CAA74795.1| 394|Homo sapiens zinc finger protein protein. 28 6.3
BC054005-1|AAH54005.1| 393|Homo sapiens zinc finger protein 200... 28 6.3
BC032575-1|AAH32575.1| 395|Homo sapiens zinc finger protein 200... 28 6.3
BC012909-1|AAH12909.1| 395|Homo sapiens zinc finger protein 200... 28 6.3
AJ003147-4|CAA05905.1| 394|Homo sapiens zinc finger protein pro... 28 6.3
AF060866-1|AAC70008.1| 394|Homo sapiens zinc finger protein ZNF... 28 6.3
AB209219-1|BAD92456.1| 272|Homo sapiens zinc finger protein 200... 28 6.3
>U57592-1|AAC50822.1| 1266|Homo sapiens jumonji putative protein
protein.
Length = 1266
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 42 EDAQHDIRQCQQTPQKLPGNDFQEPQSRQRPR 137
E+ + D Q T + +DF+E SR+RPR
Sbjct: 79 ENEKDDASQVSSTSNDVSSSDFEEGPSRKRPR 110
>BC046246-1|AAH46246.1| 1246|Homo sapiens jumonji, AT rich
interactive domain 2 protein.
Length = 1246
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 42 EDAQHDIRQCQQTPQKLPGNDFQEPQSRQRPR 137
E+ + D Q T + +DF+E SR+RPR
Sbjct: 79 ENEKDDASQVSSTSNDVSSSDFEEGPSRKRPR 110
>AL136162-1|CAI15719.1| 1246|Homo sapiens jumonji, AT rich
interactive domain 2 protein.
Length = 1246
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 42 EDAQHDIRQCQQTPQKLPGNDFQEPQSRQRPR 137
E+ + D Q T + +DF+E SR+RPR
Sbjct: 79 ENEKDDASQVSSTSNDVSSSDFEEGPSRKRPR 110
>AL021938-1|CAI19873.1| 1246|Homo sapiens jumonji, AT rich
interactive domain 2 protein.
Length = 1246
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 42 EDAQHDIRQCQQTPQKLPGNDFQEPQSRQRPR 137
E+ + D Q T + +DF+E SR+RPR
Sbjct: 79 ENEKDDASQVSSTSNDVSSSDFEEGPSRKRPR 110
>Y14443-1|CAA74795.1| 394|Homo sapiens zinc finger protein protein.
Length = 394
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 4 SAMSQQPPHRRQKKTRNMTLDSVNRRLRNCRATI 105
S +SQQPP ++K+ N ++ R++RN TI
Sbjct: 189 SLVSQQPPDNQEKERLNTSIPQ-KRKMRNLLVTI 221
>BC054005-1|AAH54005.1| 393|Homo sapiens zinc finger protein 200
protein.
Length = 393
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 4 SAMSQQPPHRRQKKTRNMTLDSVNRRLRNCRATI 105
S +SQQPP ++K+ N ++ R++RN TI
Sbjct: 188 SLVSQQPPDNQEKERLNTSIPQ-KRKMRNLLVTI 220
>BC032575-1|AAH32575.1| 395|Homo sapiens zinc finger protein 200
protein.
Length = 395
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 4 SAMSQQPPHRRQKKTRNMTLDSVNRRLRNCRATI 105
S +SQQPP ++K+ N ++ R++RN TI
Sbjct: 190 SLVSQQPPDNQEKERLNTSIPQ-KRKMRNLLVTI 222
>BC012909-1|AAH12909.1| 395|Homo sapiens zinc finger protein 200
protein.
Length = 395
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 4 SAMSQQPPHRRQKKTRNMTLDSVNRRLRNCRATI 105
S +SQQPP ++K+ N ++ R++RN TI
Sbjct: 190 SLVSQQPPDNQEKERLNTSIPQ-KRKMRNLLVTI 222
>AJ003147-4|CAA05905.1| 394|Homo sapiens zinc finger protein
protein.
Length = 394
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 4 SAMSQQPPHRRQKKTRNMTLDSVNRRLRNCRATI 105
S +SQQPP ++K+ N ++ R++RN TI
Sbjct: 189 SLVSQQPPDNQEKERLNTSIPQ-KRKMRNLLVTI 221
>AF060866-1|AAC70008.1| 394|Homo sapiens zinc finger protein ZNF200
protein.
Length = 394
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 4 SAMSQQPPHRRQKKTRNMTLDSVNRRLRNCRATI 105
S +SQQPP ++K+ N ++ R++RN TI
Sbjct: 189 SLVSQQPPDNQEKERLNTSIPQ-KRKMRNLLVTI 221
>AB209219-1|BAD92456.1| 272|Homo sapiens zinc finger protein 200
variant protein.
Length = 272
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 4 SAMSQQPPHRRQKKTRNMTLDSVNRRLRNCRATI 105
S +SQQPP ++K+ N ++ R++RN TI
Sbjct: 67 SLVSQQPPDNQEKERLNTSIPQ-KRKMRNLLVTI 99
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.313 0.121 0.336
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,492,349
Number of Sequences: 237096
Number of extensions: 261348
Number of successful extensions: 5161
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5161
length of database: 76,859,062
effective HSP length: 34
effective length of database: 68,797,798
effective search space used: 1375955960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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