Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_A19
         (215 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73104-7|CAI59116.1|  513|Caenorhabditis elegans Hypothetical pr...    27   1.8  
Z73104-6|CAI59115.1|  431|Caenorhabditis elegans Hypothetical pr...    27   1.8  
Z73104-5|CAI59114.1|  439|Caenorhabditis elegans Hypothetical pr...    27   1.8  
Z73104-4|CAA97435.2|  547|Caenorhabditis elegans Hypothetical pr...    27   1.8  
Z49909-3|CAA90107.2|  603|Caenorhabditis elegans Hypothetical pr...    25   9.7  

>Z73104-7|CAI59116.1|  513|Caenorhabditis elegans Hypothetical
           protein K08D8.4d protein.
          Length = 513

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 141 KVYKGLNKLGVKTFAYEIFVN 203
           ++Y   NKLGV TF  E F+N
Sbjct: 207 QIYSTSNKLGVYTFGLEKFIN 227


>Z73104-6|CAI59115.1|  431|Caenorhabditis elegans Hypothetical
           protein K08D8.4c protein.
          Length = 431

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 141 KVYKGLNKLGVKTFAYEIFVN 203
           ++Y   NKLGV TF  E F+N
Sbjct: 207 QIYSTSNKLGVYTFGLEKFIN 227


>Z73104-5|CAI59114.1|  439|Caenorhabditis elegans Hypothetical
           protein K08D8.4b protein.
          Length = 439

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 141 KVYKGLNKLGVKTFAYEIFVN 203
           ++Y   NKLGV TF  E F+N
Sbjct: 207 QIYSTSNKLGVYTFGLEKFIN 227


>Z73104-4|CAA97435.2|  547|Caenorhabditis elegans Hypothetical
           protein K08D8.4a protein.
          Length = 547

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 141 KVYKGLNKLGVKTFAYEIFVN 203
           ++Y   NKLGV TF  E F+N
Sbjct: 207 QIYSTSNKLGVYTFGLEKFIN 227


>Z49909-3|CAA90107.2|  603|Caenorhabditis elegans Hypothetical
           protein C14A4.3 protein.
          Length = 603

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -1

Query: 65  PLYALPRCYVYHYIHHLRAEL 3
           P+YA+ R Y Y Y+H++ A L
Sbjct: 102 PVYAI-RSYFYIYLHYIPASL 121


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,291,691
Number of Sequences: 27780
Number of extensions: 60861
Number of successful extensions: 153
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 12,740,198
effective HSP length: 51
effective length of database: 11,323,418
effective search space used: 226468360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)