BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_A19
(215 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49 ... 22 0.95
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 1.3
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 20 2.9
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 20 3.8
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 20 3.8
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 20 3.8
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 20 3.8
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 20 3.8
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 19 5.1
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 19 5.1
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 19 5.1
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 19 5.1
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 19 5.1
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 19 5.1
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 19 5.1
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 19 5.1
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 19 5.1
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 19 5.1
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 19 5.1
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 19 5.1
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 19 6.7
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 19 6.7
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 19 8.8
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 19 8.8
>AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49
protein.
Length = 134
Score = 21.8 bits (44), Expect = 0.95
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +2
Query: 5 IRHEGGEYSDKRNTWVKRTMVD 70
IRH+ YS + W K +D
Sbjct: 20 IRHQSDRYSKLKRNWRKPKGID 41
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 1.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 150 YKLFNLKKI*TCATYLKLIPFVVPV 76
Y +N KK+ Y++ IP VPV
Sbjct: 318 YNNYNNKKLYYNINYIEQIPVPVPV 342
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.2 bits (40), Expect = 2.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 150 YKLFNLKKI*TCATYLKLIPFVVPV 76
Y N KK+ Y++ IP VPV
Sbjct: 318 YNNNNYKKLYYNINYIEQIPIPVPV 342
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 19.8 bits (39), Expect = 3.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 138 NLKKI*TCATYLKLIPFVVPV 76
N KK+ Y++ IP VPV
Sbjct: 105 NYKKLYYNINYIEQIPIPVPV 125
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.8 bits (39), Expect = 3.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 138 NLKKI*TCATYLKLIPFVVPV 76
N KK+ Y++ IP VPV
Sbjct: 103 NCKKLYYNINYIEQIPIPVPV 123
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 19.8 bits (39), Expect = 3.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 138 NLKKI*TCATYLKLIPFVVPV 76
N KK+ Y++ IP VPV
Sbjct: 108 NCKKLYYNINYIEQIPIPVPV 128
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 19.8 bits (39), Expect = 3.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 138 NLKKI*TCATYLKLIPFVVPV 76
N KK+ Y++ IP VPV
Sbjct: 108 NCKKLYYNINYIEQIPIPVPV 128
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 19.8 bits (39), Expect = 3.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 138 NLKKI*TCATYLKLIPFVVPV 76
N KK+ Y++ IP VPV
Sbjct: 108 NCKKLYYNINYIEQIPIPVPV 128
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.4 bits (38), Expect = 5.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -3
Query: 138 NLKKI*TCATYLKLIPFVVPV 76
N KK+ Y++ IP VP+
Sbjct: 103 NYKKLYYNINYIEQIPIPVPI 123
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.4 bits (38), Expect = 5.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -3
Query: 138 NLKKI*TCATYLKLIPFVVPV 76
N KK+ Y++ IP VP+
Sbjct: 103 NYKKLYYNINYIEQIPIPVPI 123
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.4 bits (38), Expect = 5.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 138 NLKKI*TCATYLKLIPFVVPV 76
N KK+ Y++ IP VPV
Sbjct: 105 NYKKLYYNINYIEQIPVPVPV 125
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.4 bits (38), Expect = 5.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 138 NLKKI*TCATYLKLIPFVVPV 76
N KK+ Y++ IP VPV
Sbjct: 105 NYKKLYYNINYIEQIPVPVPV 125
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.4 bits (38), Expect = 5.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 138 NLKKI*TCATYLKLIPFVVPV 76
N KK+ Y++ IP VPV
Sbjct: 105 NYKKLYYNINYIEQIPVPVPV 125
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.4 bits (38), Expect = 5.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 138 NLKKI*TCATYLKLIPFVVPV 76
N KK+ Y++ IP VPV
Sbjct: 105 NYKKLYYNINYIEQIPVPVPV 125
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.4 bits (38), Expect = 5.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 138 NLKKI*TCATYLKLIPFVVPV 76
N KK+ Y++ IP VPV
Sbjct: 105 NYKKLYYNINYIEQIPVPVPV 125
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.4 bits (38), Expect = 5.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 138 NLKKI*TCATYLKLIPFVVPV 76
N KK+ Y++ IP VPV
Sbjct: 105 NYKKLYYNINYIEQIPVPVPV 125
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.4 bits (38), Expect = 5.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 138 NLKKI*TCATYLKLIPFVVPV 76
N KK+ Y++ IP VPV
Sbjct: 105 NYKKLYYNINYIEQIPVPVPV 125
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 19.4 bits (38), Expect = 5.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 138 NLKKI*TCATYLKLIPFVVPV 76
N KK+ Y++ IP VPV
Sbjct: 108 NCKKLYYNINYIEQIPVPVPV 128
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 19.4 bits (38), Expect = 5.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 138 NLKKI*TCATYLKLIPFVVPV 76
N KK+ Y++ IP VPV
Sbjct: 113 NYKKLYYNINYIEQIPVPVPV 133
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 19.4 bits (38), Expect = 5.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 138 NLKKI*TCATYLKLIPFVVPV 76
N KK+ Y++ IP VPV
Sbjct: 347 NYKKLYYNINYIEQIPVPVPV 367
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 19.0 bits (37), Expect = 6.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 48 QVLRLSLYSPPSCRIN 1
+V+ LS P+C+IN
Sbjct: 393 EVMELSDLHHPNCKIN 408
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 19.0 bits (37), Expect = 6.7
Identities = 7/21 (33%), Positives = 10/21 (47%)
Frame = +2
Query: 11 HEGGEYSDKRNTWVKRTMVDE 73
HE G N W+ R+ V +
Sbjct: 787 HESGFMESLDNHWILRSNVQQ 807
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 8.8
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -3
Query: 138 NLKKI*TCATYLKLIPFVVPV 76
N KK+ Y++ +P +PV
Sbjct: 103 NYKKLYYNINYIEQVPVPIPV 123
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 18.6 bits (36), Expect = 8.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 175 KLLHMKYLLIKC 210
KL M YL+I+C
Sbjct: 143 KLKEMFYLIIEC 154
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,468
Number of Sequences: 438
Number of extensions: 710
Number of successful extensions: 24
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used: 3154875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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